MGE detailed information
MGE type: Prophage MGE length: 54782 bp
Accession: NZ_CP069957 Location: 591098..645879 Organism: Escherichia coli strain FDAARGOS_1279 Replicon: chromosome
Accession: NZ_CP069957 Location: 591098..645879 Organism: Escherichia coli strain FDAARGOS_1279 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K09_RS02845 (586479) | 586479..587189 | + | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| I6K09_RS02850 (587192) | 587192..587752 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| I6K09_RS02855 (587787) | 587787..588128 | - | 342 | WP_000705205.1 | DUF1283 family protein | - |
| I6K09_RS02860 (588263) | 588263..588589 | + | 327 | WP_001314753.1 | YnfA family protein | - |
| I6K09_RS02865 (588795) | 588795..590009 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| I6K09_RS02870 (590021) | 590021..591040 | + | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| I6K09_RS02880 (591228) | 591228..592508 | - | 1281 | WP_021523105.1 | Putative defective protein IntQ ; Integrase | Integrase |
| I6K09_RS02885 (592564) | 592564..594135 | - | 1572 | WP_029392005.1 | IS66 family transposase ISCro1 | Transposase |
| I6K09_RS02890 (594155) | 594155..594502 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| I6K09_RS02895 (594502) | 594502..595179 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| I6K09_RS02900 (595250) | 595250..595501 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| I6K09_RS02905 (595574) | 595574..598045 | - | 2472 | WP_000048363.1 | exonuclease | - |
| I6K09_RS02910 (598139) | 598139..598330 | - | 192 | WP_001083276.1 | lysis protein YdfD | - |
| I6K09_RS02915 (598327) | 598327..598515 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| I6K09_RS26095 (599476) | 599476..599577 | - | 102 | Protein_574 | protein YdfB | - |
| I6K09_RS02925 (599579) | 599579..599734 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| I6K09_RS02930 (599903) | 599903..600310 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| I6K09_RS02935 (600391) | 600391..600618 | + | 228 | WP_000921596.1 | Cro/CI family transcriptional regulator | - |
| I6K09_RS02940 (600602) | 600602..601123 | + | 522 | WP_000705355.1 | toxin YdaT family protein | - |
| I6K09_RS02945 (601104) | 601104..602069 | + | 966 | WP_000054487.1 | hypothetical protein | - |
| I6K09_RS02950 (602110) | 602110..602508 | + | 399 | WP_001151242.1 | DUF977 family protein | - |
| I6K09_RS02955 (602711) | 602711..603376 | + | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| I6K09_RS02960 (603585) | 603585..604199 | + | 615 | WP_001265627.1 | hypothetical protein | - |
| I6K09_RS02965 (604202) | 604202..605224 | + | 1023 | WP_000915483.1 | DUF4868 domain-containing protein | - |
| I6K09_RS02970 (605729) | 605729..606751 | + | 1023 | Protein_584 | ISNCY family transposase ISCARN112 | Transposase |
| I6K09_RS25835 (606872) | 606872..607021 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| I6K09_RS02975 (607458) | 607458..607790 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| I6K09_RS02980 (607993) | 607993..608298 | - | 306 | WP_001326990.1 | protein YdfV | - |
| I6K09_RS02985 (608323) | 608323..608562 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| I6K09_RS02990 (608562) | 608562..608849 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| I6K09_RS02995 (608921) | 608921..609076 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| I6K09_RS03000 (609293) | 609293..609544 | + | 252 | WP_000980994.1 | protein Rem | - |
| I6K09_RS03005 (609611) | 609611..609889 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| I6K09_RS03010 (609891) | 609891..610940 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| I6K09_RS03015 (610954) | 610954..611706 | + | 753 | WP_001047135.1 | antitermination protein | - |
| I6K09_RS03020 (611984) | 611984..612073 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| I6K09_RS03025 (612128) | 612128..612340 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| I6K09_RS03030 (612641) | 612641..612856 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| I6K09_RS03035 (613307) | 613307..613765 | + | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| I6K09_RS25700 (613932) | 613932..614102 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| I6K09_RS03040 (614322) | 614322..614537 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| I6K09_RS03045 (614542) | 614542..614853 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| I6K09_RS03050 (614850) | 614850..615383 | + | 534 | WP_001092971.1 | lysozyme | - |
| I6K09_RS03055 (615380) | 615380..615877 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| I6K09_RS03060 (616240) | 616240..616452 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| I6K09_RS03065 (616463) | 616463..616651 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| I6K09_RS03070 (616654) | 616654..616719 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| I6K09_RS03075 (616724) | 616724..616954 | + | 231 | WP_000720962.1 | protein YnfN | - |
| I6K09_RS03080 (617126) | 617126..617299 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| I6K09_RS03085 (617451) | 617451..617861 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| I6K09_RS03090 (617919) | 617919..618152 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| I6K09_RS03095 (618541) | 618541..619086 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| I6K09_RS03100 (619061) | 619061..620986 | + | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| I6K09_RS03105 (620983) | 620983..621189 | + | 207 | WP_000198149.1 | gpW family protein | - |
| I6K09_RS03110 (621186) | 621186..622787 | + | 1602 | WP_001356819.1 | phage portal protein | - |
| I6K09_RS03115 (622768) | 622768..624087 | + | 1320 | WP_020233915.1 | S49 family peptidase | - |
| I6K09_RS03120 (624097) | 624097..624429 | + | 333 | WP_001708751.1 | head decoration protein | - |
| I6K09_RS03125 (624484) | 624484..625509 | + | 1026 | WP_000063277.1 | major capsid protein | - |
| I6K09_RS03130 (625551) | 625551..625949 | + | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| I6K09_RS03135 (625961) | 625961..626314 | + | 354 | WP_000752979.1 | head-tail joining protein | - |
| I6K09_RS03140 (626326) | 626326..626904 | + | 579 | WP_000975070.1 | phage tail protein | - |
| I6K09_RS03145 (626901) | 626901..627296 | + | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| I6K09_RS03150 (627304) | 627304..628044 | + | 741 | WP_204690255.1 | phage tail protein | - |
| I6K09_RS03155 (628060) | 628060..628482 | + | 423 | WP_000479153.1 | phage minor tail protein G | - |
| I6K09_RS03160 (628464) | 628464..628898 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| I6K09_RS03165 (628891) | 628891..631452 | + | 2562 | WP_032153656.1 | phage tail tape measure protein | - |
| I6K09_RS03170 (631449) | 631449..631778 | + | 330 | WP_000847345.1 | phage tail protein | - |
| I6K09_RS03175 (631778) | 631778..632476 | + | 699 | WP_001551186.1 | phage minor tail protein L | - |
| I6K09_RS03180 (632482) | 632482..633225 | + | 744 | WP_032153655.1 | C40 family peptidase | - |
| I6K09_RS03185 (633162) | 633162..633764 | + | 603 | WP_049286672.1 | tail assembly protein | - |
| I6K09_RS03190 (633825) | 633825..637304 | + | 3480 | WP_021523093.1 | host specificity protein J | - |
| I6K09_RS03195 (637491) | 637491..637949 | + | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| I6K09_RS03200 (638083) | 638083..638682 | + | 600 | WP_001542091.1 | Outer membrane protein X | VF |
| I6K09_RS03205 (638747) | 638747..641146 | + | 2400 | WP_032152843.1 | prophage tail fiber N-terminal domain-containing protein | - |
| I6K09_RS03210 (641143) | 641143..641424 | + | 282 | WP_000654154.1 | hypothetical protein | - |
| I6K09_RS03215 (641434) | 641434..642138 | + | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| I6K09_RS03220 (642149) | 642149..642442 | + | 294 | WP_000355609.1 | hypothetical protein | - |
| I6K09_RS03225 (642462) | 642462..642572 | + | 111 | Protein_637 | tail fiber assembly protein | - |
| I6K09_RS03230 (642670) | 642670..643260 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| I6K09_RS03235 (643577) | 643577..643810 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| I6K09_RS03240 (643879) | 643879..643992 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| I6K09_RS03245 (644596) | 644596..645879 | + | 1284 | Protein_641 | MHS family MFS transporter YdfJ | - |
| I6K09_RS03250 (645968) | 645968..647428 | + | 1461 | WP_000527786.1 | mannitol dehydrogenase family protein | - |
| I6K09_RS03255 (647464) | 647464..647667 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| I6K09_RS03260 (647845) | 647845..648531 | - | 687 | WP_000215553.1 | DNA-binding transcriptional regulator rspR | - |
| I6K09_RS03265 (648620) | 648620..649366 | - | 747 | WP_204690256.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|