MGE detailed information
MGE type: Genomic_island MGE length: 20681 bp
Accession: NZ_CP069935 Location: 4890213..4910893 Organism: Escherichia coli strain FDAARGOS_1302 Replicon: chromosome
Accession: NZ_CP069935 Location: 4890213..4910893 Organism: Escherichia coli strain FDAARGOS_1302 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K32_RS23620 (4886328) | 4886328..4886753 | - | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
| I6K32_RS23625 (4886758) | 4886758..4888242 | - | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| I6K32_RS23630 (4888265) | 4888265..4888768 | - | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| I6K32_RS23635 (4889474) | 4889474..4889992 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| I6K32_RS25255 (4890213) | 4890213..4892194 | + | 1982 | Protein_4660 | hypothetical protein | VF |
| I6K32_RS23650 (4892301) | 4892301..4893347 | + | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| I6K32_RS23655 (4893340) | 4893340..4894779 | + | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| I6K32_RS23660 (4894754) | 4894754..4895044 | + | 291 | WP_000513317.1 | hypothetical protein | - |
| I6K32_RS23665 (4895302) | 4895302..4896066 | + | 765 | Protein_4664 | ISAs1 family transposase ISEc1 | Transposase |
| I6K32_RS23670 (4896295) | 4896295..4896681 | + | 387 | WP_001513602.1 | hypothetical protein | - |
| I6K32_RS23675 (4896892) | 4896892..4897380 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| I6K32_RS23680 (4897406) | 4897406..4897600 | + | 195 | Protein_4667 | ISAs1 family transposase | - |
| I6K32_RS23685 (4897651) | 4897651..4898421 | - | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| I6K32_RS23690 (4898602) | 4898602..4899048 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| I6K32_RS23695 (4899091) | 4899091..4901535 | - | 2445 | WP_000973137.1 | hypothetical protein | VF |
| I6K32_RS23700 (4901775) | 4901775..4902353 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| I6K32_RS23705 (4902558) | 4902558..4903325 | + | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| I6K32_RS23710 (4903296) | 4903296..4904036 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| I6K32_RS23715 (4904348) | 4904348..4905097 | + | 750 | WP_000093934.1 | hypothetical protein | VF |
| I6K32_RS23720 (4905273) | 4905273..4905770 | + | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| I6K32_RS23725 (4905853) | 4905853..4906011 | - | 159 | WP_014639450.1 | hypothetical protein | - |
| I6K32_RS23730 (4906090) | 4906090..4907802 | - | 1713 | Protein_4677 | hypothetical protein | VF |
| I6K32_RS23735 (4907774) | 4907774..4908559 | + | 786 | WP_000207544.1 | hypothetical protein | VF |
| I6K32_RS23740 (4908630) | 4908630..4909685 | + | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| I6K32_RS23745 (4909737) | 4909737..4910030 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| I6K32_RS23750 (4910033) | 4910033..4910431 | + | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| I6K32_RS23755 (4910441) | 4910441..4910893 | + | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| I6K32_RS23760 (4911083) | 4911083..4912222 | + | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| I6K32_RS23765 (4912219) | 4912219..4912833 | + | 615 | WP_000602123.1 | peptide chain release factor H | - |
| I6K32_RS23770 (4912890) | 4912890..4914347 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| I6K32_RS23775 (4914608) | 4914608..4915066 | + | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| - (4915662) | 4915662..4915742 | + | 81 | NuclAT_4 | - | - |
| - (4915662) | 4915662..4915742 | + | 81 | NuclAT_4 | - | - |
| - (4915662) | 4915662..4915742 | + | 81 | NuclAT_4 | - | - |
| - (4915662) | 4915662..4915742 | + | 81 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|