MGE detailed information
MGE type: Prophage MGE length: 57436 bp
Accession: NZ_CP069882 Location: 3921605..3979040 Organism: Escherichia coli strain FDAARGOS_1289 Replicon: chromosome
Accession: NZ_CP069882 Location: 3921605..3979040 Organism: Escherichia coli strain FDAARGOS_1289 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K19_RS18770 () | 3917815..3918273 | - | 459 | WP_000526135.1 | IS200/IS605-like element IS200C family transposase | - |
| I6K19_RS18775 () | 3918464..3919345 | - | 882 | WP_000984517.1 | protease HtpX | - |
| I6K19_RS18780 () | 3919537..3921585 | - | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| I6K19_RS18785 () | 3921605..3922303 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| I6K19_RS18790 () | 3922400..3922897 | - | 498 | WP_001033105.1 | L-methionine (R)-S-oxide reductase | - |
| I6K19_RS18795 () | 3923027..3924310 | + | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| I6K19_RS18800 () | 3924279..3926912 | + | 2634 | WP_001306757.1 | hypothetical protein | VF |
| I6K19_RS18805 () | 3926992..3928431 | + | 1440 | WP_001309555.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| I6K19_RS18810 () | 3928549..3928785 | + | 237 | WP_001295499.1 | YebV family protein | - |
| I6K19_RS18815 () | 3928890..3929081 | + | 192 | WP_001296140.1 | YebW family protein | - |
| I6K19_RS18820 () | 3929082..3929738 | - | 657 | WP_001546849.1 | protein-serine/threonine phosphatase | - |
| I6K19_RS27145 () | 3930595..3931575 | - | 981 | WP_251301795.1 | tail fiber domain-containing protein | - |
| I6K19_RS27150 () | 3932674..3933018 | - | 345 | Protein_3721 | hypothetical protein | - |
| I6K19_RS18830 () | 3933018..3933698 | - | 681 | WP_000049948.1 | DUF2612 domain-containing protein | - |
| I6K19_RS18835 () | 3933695..3934894 | - | 1200 | WP_204606435.1 | baseplate J/gp47 family protein | - |
| I6K19_RS18840 () | 3934894..3935247 | - | 354 | WP_001270634.1 | hypothetical protein | - |
| I6K19_RS18845 () | 3935247..3935999 | - | 753 | WP_021517997.1 | Gp138 family membrane-puncturing spike protein | - |
| I6K19_RS18850 () | 3936222..3936587 | + | 366 | WP_021517996.1 | hypothetical protein | - |
| I6K19_RS18855 () | 3936607..3936954 | - | 348 | WP_021517995.1 | hypothetical protein | - |
| I6K19_RS18860 () | 3936957..3938021 | - | 1065 | WP_032167541.1 | hypothetical protein | - |
| I6K19_RS18865 () | 3938024..3938326 | - | 303 | WP_000155119.1 | hypothetical protein | - |
| I6K19_RS18870 () | 3938326..3938913 | - | 588 | WP_001420197.1 | hypothetical protein | - |
| I6K19_RS18875 () | 3938913..3940898 | - | 1986 | WP_021517993.1 | hypothetical protein | - |
| I6K19_RS27155 () | 3940888..3941064 | - | 177 | WP_023141050.1 | hypothetical protein | - |
| I6K19_RS18880 () | 3941076..3941528 | - | 453 | WP_000393958.1 | hypothetical protein | - |
| I6K19_RS18885 () | 3941532..3941972 | - | 441 | WP_000109249.1 | DUF3277 family protein | - |
| I6K19_RS18890 () | 3941983..3943128 | - | 1146 | WP_000046924.1 | DUF3383 family protein | - |
| I6K19_RS18895 () | 3943132..3943695 | - | 564 | WP_021517991.1 | hypothetical protein | - |
| I6K19_RS18900 () | 3943670..3944059 | - | 390 | WP_001142480.1 | hypothetical protein | - |
| I6K19_RS18905 () | 3944046..3944600 | - | 555 | WP_021517990.1 | hypothetical protein | - |
| I6K19_RS18910 () | 3944597..3945004 | - | 408 | WP_001125665.1 | DUF4054 domain-containing protein | - |
| I6K19_RS18915 () | 3945003..3945236 | + | 234 | WP_160393966.1 | hypothetical protein | - |
| I6K19_RS18920 () | 3945233..3946174 | - | 942 | WP_021517989.1 | DUF2184 domain-containing protein | - |
| I6K19_RS18925 () | 3946186..3946692 | - | 507 | WP_001066732.1 | hypothetical protein | - |
| I6K19_RS18930 () | 3946696..3947916 | - | 1221 | WP_021517988.1 | DUF2213 domain-containing protein | - |
| I6K19_RS18935 () | 3947931..3948665 | - | 735 | WP_000184967.1 | phage minor head protein | - |
| I6K19_RS18940 () | 3948556..3950022 | - | 1467 | WP_000113489.1 | DUF1073 domain-containing protein | - |
| I6K19_RS18945 () | 3950022..3951425 | - | 1404 | WP_000204763.1 | PBSX family phage terminase large subunit | - |
| I6K19_RS18950 () | 3951391..3952140 | - | 750 | WP_001118115.1 | hypothetical protein | - |
| I6K19_RS18955 () | 3952198..3952383 | - | 186 | WP_000113283.1 | hypothetical protein | - |
| I6K19_RS27160 () | 3952364..3952642 | - | 279 | WP_173671027.1 | hypothetical protein | - |
| I6K19_RS18960 () | 3952527..3952919 | - | 393 | WP_021517986.1 | DUF2570 domain-containing protein | - |
| I6K19_RS18965 () | 3952903..3953379 | - | 477 | WP_021517985.1 | glycoside hydrolase family protein | - |
| I6K19_RS18970 () | 3953383..3953724 | - | 342 | WP_000781775.1 | phage holin, lambda family | - |
| I6K19_RS18975 () | 3953942..3954220 | + | 279 | WP_021517984.1 | hypothetical protein | - |
| I6K19_RS18980 () | 3954206..3954436 | - | 231 | WP_021517983.1 | hypothetical protein | - |
| I6K19_RS18985 () | 3954574..3955155 | - | 582 | WP_032167544.1 | ORF6N domain-containing protein | - |
| I6K19_RS18990 () | 3955429..3955983 | - | 555 | WP_032167545.1 | DUF1133 family protein | - |
| I6K19_RS18995 () | 3955980..3956270 | - | 291 | WP_000228038.1 | DUF1364 domain-containing protein | - |
| I6K19_RS19000 () | 3956270..3956869 | - | 600 | WP_032167546.1 | DUF1367 family protein | - |
| I6K19_RS19005 () | 3956941..3957153 | - | 213 | WP_032167547.1 | hypothetical protein | - |
| I6K19_RS19010 () | 3957428..3957583 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| I6K19_RS19015 () | 3958142..3958508 | - | 367 | Protein_3761 | hypothetical protein | - |
| I6K19_RS19020 () | 3958505..3958681 | - | 177 | WP_000753059.1 | hypothetical protein | - |
| I6K19_RS19025 () | 3958674..3958856 | - | 183 | WP_001224662.1 | hypothetical protein | - |
| I6K19_RS19030 () | 3958950..3959306 | - | 357 | WP_000403785.1 | hypothetical protein | - |
| I6K19_RS19035 () | 3959364..3959787 | - | 424 | Protein_3765 | DUF977 family protein | - |
| I6K19_RS19040 () | 3959803..3960564 | - | 762 | WP_032167548.1 | DUF1627 domain-containing protein | - |
| I6K19_RS19045 () | 3960587..3961333 | - | 747 | WP_000788992.1 | ATP-binding protein | - |
| I6K19_RS19050 () | 3961340..3962134 | - | 795 | WP_032167549.1 | hypothetical protein | - |
| I6K19_RS19055 () | 3962212..3962634 | - | 423 | WP_000702025.1 | toxin YdaT family protein | - |
| I6K19_RS19060 () | 3962631..3962873 | - | 243 | WP_001033914.1 | helix-turn-helix transcriptional regulator | - |
| I6K19_RS19065 () | 3962970..3963389 | + | 420 | WP_000410105.1 | helix-turn-helix domain-containing protein | - |
| I6K19_RS19070 () | 3963689..3963907 | + | 219 | WP_000232637.1 | hypothetical protein | - |
| I6K19_RS19075 () | 3963873..3964067 | - | 195 | WP_001419881.1 | hypothetical protein | - |
| I6K19_RS19080 () | 3964463..3964684 | + | 222 | WP_000560227.1 | cell division protein FtsZ | - |
| I6K19_RS19085 () | 3964684..3964854 | + | 171 | WP_001359121.1 | YdaE family protein | - |
| I6K19_RS19090 () | 3964929..3965204 | + | 276 | WP_001452559.1 | hypothetical protein | - |
| I6K19_RS19095 () | 3965304..3968432 | + | 3129 | WP_021517973.1 | exodeoxyribonuclease VIII | - |
| I6K19_RS19100 () | 3968444..3969496 | + | 1053 | WP_021517972.1 | RecT family recombinase | - |
| I6K19_RS19105 () | 3969560..3969754 | + | 195 | WP_021500490.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| I6K19_RS19110 () | 3969747..3969935 | + | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 3969753..3969931 | - | 179 | NuclAT_0 | - | - |
| - () | 3969753..3969931 | - | 179 | NuclAT_0 | - | - |
| - () | 3969753..3969931 | - | 179 | NuclAT_0 | - | - |
| - () | 3969753..3969931 | - | 179 | NuclAT_0 | - | - |
| I6K19_RS19115 () | 3970042..3970323 | + | 282 | WP_001311878.1 | excisionase | - |
| I6K19_RS19120 () | 3970289..3971365 | + | 1077 | WP_021517971.1 | hypothetical protein ; Integrase | Integrase |
| - | 3971496..3971730 | + | 235 | - | - | Antitoxin Detail |
| - | 3971497..3971600 | - | 104 | - | - | Toxin Detail |
| I6K19_RS19125 () | 3971758..3972099 | - | 342 | WP_000976481.1 | YebY family protein | - |
| I6K19_RS19130 () | 3972112..3972984 | - | 873 | WP_000879330.1 | copper homeostasis membrane protein CopD | - |
| I6K19_RS19135 () | 3972988..3973362 | - | 375 | WP_000204705.1 | CopC domain-containing protein YobA | - |
| I6K19_RS19140 () | 3973501..3973731 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| I6K19_RS19145 () | 3973833..3974489 | + | 657 | WP_000011651.1 | carbon-nitrogen hydrolase family protein YobB | - |
| I6K19_RS19150 () | 3974513..3975175 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| I6K19_RS19155 () | 3975172..3977232 | - | 2061 | WP_000936971.1 | oligopeptidase B | - |
| I6K19_RS19160 () | 3977389..3977814 | - | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| I6K19_RS19165 () | 3977871..3979040 | + | 1170 | WP_000942660.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| I6K19_RS19170 () | 3979204..3979863 | - | 660 | WP_000024735.1 | tellurite resistance TerB family protein | - |
| I6K19_RS19175 () | 3980190..3980546 | - | 357 | WP_001295500.1 | protein YebF | - |
| I6K19_RS19180 () | 3980613..3980903 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| I6K19_RS19185 () | 3981037..3982215 | + | 1179 | WP_000173461.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| I6K19_RS19190 () | 3982270..3982911 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|