MGE detailed information
MGE type: Prophage MGE length: 50652 bp
Accession: NZ_CP069865 Location: 4784019..4834670 Organism: Escherichia coli strain FDAARGOS_1282 Replicon: chromosome
Accession: NZ_CP069865 Location: 4784019..4834670 Organism: Escherichia coli strain FDAARGOS_1282 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K12_RS23360 (4780532) | 4780532..4781278 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| I6K12_RS23365 (4781367) | 4781367..4782053 | + | 687 | WP_000215553.1 | DNA-binding transcriptional regulator rspR | - |
| I6K12_RS23370 (4782231) | 4782231..4782434 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| I6K12_RS23375 (4782470) | 4782470..4783930 | - | 1461 | WP_000527786.1 | mannitol dehydrogenase family protein | - |
| I6K12_RS23380 (4784019) | 4784019..4785302 | - | 1284 | Protein_4457 | MHS family MFS transporter YdfJ | - |
| I6K12_RS23385 (4785906) | 4785906..4786019 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| I6K12_RS23390 (4786088) | 4786088..4786321 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| I6K12_RS23395 (4786638) | 4786638..4787228 | + | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| I6K12_RS23400 (4787326) | 4787326..4787436 | - | 111 | Protein_4461 | tail fiber assembly protein | - |
| I6K12_RS23405 (4787456) | 4787456..4787749 | - | 294 | WP_000355609.1 | hypothetical protein | - |
| I6K12_RS23410 (4787760) | 4787760..4788464 | - | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| I6K12_RS23415 (4788474) | 4788474..4788755 | - | 282 | WP_000654154.1 | hypothetical protein | - |
| I6K12_RS23420 (4788752) | 4788752..4791151 | - | 2400 | WP_032152843.1 | prophage tail fiber N-terminal domain-containing protein | - |
| I6K12_RS23425 (4791216) | 4791216..4791815 | - | 600 | WP_001542091.1 | Outer membrane protein X | VF |
| I6K12_RS23430 (4791883) | 4791883..4795362 | - | 3480 | WP_021523093.1 | host specificity protein J | - |
| I6K12_RS23435 (4795423) | 4795423..4796025 | - | 603 | WP_049286672.1 | tail assembly protein | - |
| I6K12_RS23440 (4795962) | 4795962..4796705 | - | 744 | WP_032153655.1 | C40 family peptidase | - |
| I6K12_RS23445 (4796711) | 4796711..4797409 | - | 699 | WP_001551186.1 | phage minor tail protein L | - |
| I6K12_RS23450 (4797409) | 4797409..4797738 | - | 330 | WP_000847345.1 | phage tail protein | - |
| I6K12_RS23455 (4797735) | 4797735..4800296 | - | 2562 | WP_032153656.1 | phage tail tape measure protein | - |
| I6K12_RS23460 (4800289) | 4800289..4800723 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| I6K12_RS23465 (4800705) | 4800705..4801127 | - | 423 | WP_000479153.1 | phage minor tail protein G | - |
| I6K12_RS23470 (4801143) | 4801143..4801883 | - | 741 | WP_001349920.1 | phage tail protein | - |
| I6K12_RS23475 (4801891) | 4801891..4802286 | - | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| I6K12_RS23480 (4802283) | 4802283..4802861 | - | 579 | WP_000975070.1 | phage tail protein | - |
| I6K12_RS23485 (4802873) | 4802873..4803226 | - | 354 | WP_000752979.1 | head-tail joining protein | - |
| I6K12_RS23490 (4803238) | 4803238..4803636 | - | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| I6K12_RS23495 (4803678) | 4803678..4804703 | - | 1026 | WP_000063277.1 | major capsid protein | - |
| I6K12_RS23500 (4804758) | 4804758..4805090 | - | 333 | WP_001708751.1 | head decoration protein | - |
| I6K12_RS23505 (4805100) | 4805100..4806419 | - | 1320 | WP_020233915.1 | S49 family peptidase | - |
| I6K12_RS23510 (4806400) | 4806400..4808001 | - | 1602 | WP_001356819.1 | phage portal protein | - |
| I6K12_RS23515 (4807998) | 4807998..4808204 | - | 207 | WP_000198149.1 | gpW family protein | - |
| I6K12_RS23520 (4808201) | 4808201..4810126 | - | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| I6K12_RS23525 (4810101) | 4810101..4810646 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| I6K12_RS23530 (4811035) | 4811035..4811268 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| I6K12_RS23535 (4811326) | 4811326..4811736 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| I6K12_RS23540 (4811888) | 4811888..4812061 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| I6K12_RS23545 (4812233) | 4812233..4812463 | - | 231 | WP_000720962.1 | protein YnfN | - |
| I6K12_RS23550 (4812468) | 4812468..4812533 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| I6K12_RS23555 (4812536) | 4812536..4812724 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| I6K12_RS23560 (4812735) | 4812735..4812947 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| I6K12_RS23565 (4813310) | 4813310..4813807 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| I6K12_RS23570 (4813804) | 4813804..4814337 | - | 534 | WP_001092971.1 | lysozyme | - |
| I6K12_RS23575 (4814334) | 4814334..4814645 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| I6K12_RS23580 (4814650) | 4814650..4814865 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| I6K12_RS25660 (4815085) | 4815085..4815255 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| I6K12_RS23585 (4815619) | 4815619..4815834 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| I6K12_RS23590 (4816135) | 4816135..4816347 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| I6K12_RS23595 (4816402) | 4816402..4816491 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| I6K12_RS23600 (4816769) | 4816769..4817521 | - | 753 | WP_001047135.1 | antitermination protein | - |
| I6K12_RS23605 (4817535) | 4817535..4818584 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| I6K12_RS23610 (4818586) | 4818586..4818864 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| I6K12_RS23615 (4818931) | 4818931..4819182 | - | 252 | WP_000980994.1 | protein Rem | - |
| I6K12_RS23620 (4819399) | 4819399..4819554 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| I6K12_RS23625 (4819626) | 4819626..4819913 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| I6K12_RS23630 (4819913) | 4819913..4820152 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| I6K12_RS23635 (4820177) | 4820177..4820482 | + | 306 | WP_001326990.1 | protein YdfV | - |
| I6K12_RS23640 (4820685) | 4820685..4821017 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| I6K12_RS25875 (4821454) | 4821454..4821603 | - | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| I6K12_RS23645 (4821676) | 4821676..4822746 | - | 1071 | Protein_4512 | ISNCY family transposase ISCARN112 | Transposase |
| I6K12_RS23650 (4823251) | 4823251..4824273 | - | 1023 | WP_000915483.1 | DUF4868 domain-containing protein | - |
| I6K12_RS23655 (4824276) | 4824276..4824890 | - | 615 | WP_001265627.1 | hypothetical protein | - |
| I6K12_RS23660 (4825099) | 4825099..4825764 | - | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| I6K12_RS23665 (4825967) | 4825967..4826365 | - | 399 | WP_001151242.1 | DUF977 family protein | - |
| I6K12_RS23670 (4826406) | 4826406..4827371 | - | 966 | WP_000054487.1 | hypothetical protein | - |
| I6K12_RS23675 (4827352) | 4827352..4827873 | - | 522 | WP_000705355.1 | toxin YdaT family protein | - |
| I6K12_RS23680 (4827857) | 4827857..4828084 | - | 228 | WP_000921596.1 | Cro/CI family transcriptional regulator | - |
| I6K12_RS23685 (4828165) | 4828165..4828572 | + | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| I6K12_RS23690 (4828741) | 4828741..4828896 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| I6K12_RS26005 (4828898) | 4828898..4828999 | + | 102 | Protein_4522 | protein YdfB | - |
| I6K12_RS23700 (4829960) | 4829960..4830148 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| I6K12_RS23705 (4830145) | 4830145..4830336 | + | 192 | WP_001083276.1 | lysis protein YdfD | - |
| I6K12_RS23710 (4830430) | 4830430..4832901 | + | 2472 | WP_000048363.1 | exonuclease | - |
| I6K12_RS23715 (4832974) | 4832974..4833225 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| I6K12_RS23720 (4833260) | 4833260..4834540 | + | 1281 | WP_021523105.1 | Putative defective protein IntQ ; Integrase | Integrase |
| I6K12_RS23730 (4834728) | 4834728..4835747 | - | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| I6K12_RS23735 (4835759) | 4835759..4836973 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| I6K12_RS23740 (4837179) | 4837179..4837505 | - | 327 | WP_001314753.1 | YnfA family protein | - |
| I6K12_RS23745 (4837640) | 4837640..4837981 | + | 342 | WP_000705205.1 | DUF1283 family protein | - |
| I6K12_RS23750 (4838016) | 4838016..4838576 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| I6K12_RS23755 (4838579) | 4838579..4839289 | - | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|