MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 174030 bp
Accession: NZ_CP069815 Location: 2818126..2992155 Organism: Raoultella planticola strain HH15 Replicon: chromosome
Accession: NZ_CP069815 Location: 2818126..2992155 Organism: Raoultella planticola strain HH15 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G9395_RS13380 () | 2813237..2814376 | + | 1140 | WP_131066516.1 | YbfB/YjiJ family MFS transporter | - |
| G9395_RS13385 () | 2814373..2815215 | - | 843 | WP_064793793.1 | LysR family transcriptional regulator | - |
| G9395_RS13390 () | 2815306..2816373 | + | 1068 | WP_064793792.1 | nitronate monooxygenase | - |
| G9395_RS13395 () | 2816425..2817084 | - | 660 | WP_162180096.1 | ABC transporter permease | - |
| G9395_RS13400 () | 2817081..2817872 | - | 792 | WP_073554066.1 | ATP-binding cassette domain-containing protein | - |
| G9395_RS13405 () | 2817869..2818675 | - | 807 | WP_032687661.1 | MetQ/NlpA family ABC transporter substrate-binding protein | - |
| G9395_RS13410 () | 2818699..2819727 | - | 1029 | WP_032687662.1 | isopenicillin N synthase family oxygenase | - |
| G9395_RS13415 () | 2820013..2820291 | + | 279 | WP_046852490.1 | VF530 family protein | - |
| G9395_RS13420 () | 2820322..2821269 | - | 948 | WP_032696170.1 | AraC family transcriptional regulator | - |
| G9395_RS13425 () | 2821378..2822577 | + | 1200 | WP_032687665.1 | MFS transporter | - |
| G9395_RS13430 () | 2822602..2823069 | - | 468 | WP_032696171.1 | GNAT family N-acetyltransferase | - |
| G9395_RS13435 () | 2823374..2824648 | + | 1275 | WP_134935326.1 | oxalate/formate MFS antiporter | - |
| G9395_RS13440 () | 2824757..2826142 | - | 1386 | WP_032696173.1 | hypothetical protein | VF |
| G9395_RS13445 () | 2826669..2827862 | + | 1194 | WP_099973228.1 | ABC transporter substrate-binding protein | - |
| G9395_RS13450 () | 2827859..2829886 | + | 2028 | WP_032699820.1 | HAMP domain-containing protein | - |
| G9395_RS13455 () | 2829852..2831096 | + | 1245 | WP_165634124.1 | sigma-54 dependent transcriptional regulator | - |
| G9395_RS13460 () | 2831107..2832432 | - | 1326 | WP_032699821.1 | uracil-xanthine permease family protein | - |
| G9395_RS13465 () | 2832493..2833617 | - | 1125 | WP_046852494.1 | aryl-sulfate sulfotransferase | - |
| G9395_RS13470 () | 2833816..2834835 | + | 1020 | WP_032699823.1 | substrate-binding domain-containing protein | - |
| G9395_RS13475 () | 2834848..2835396 | - | 549 | WP_081277355.1 | hypothetical protein | VF |
| G9395_RS13480 () | 2835437..2836045 | - | 609 | WP_172619946.1 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase | VF |
| G9395_RS13485 () | 2836239..2836820 | - | 582 | WP_064793790.1 | nuclear transport factor 2 family protein | - |
| G9395_RS13490 () | 2836870..2837061 | + | 192 | Protein_2642 | LysR family transcriptional regulator | - |
| G9395_RS13495 () | 2837082..2838317 | - | 1236 | WP_064793789.1 | MFS transporter | - |
| G9395_RS13500 () | 2838460..2838915 | + | 456 | WP_032699826.1 | helix-turn-helix transcriptional regulator | - |
| G9395_RS13505 () | 2838995..2839387 | + | 393 | WP_196770349.1 | hypothetical protein | - |
| G9395_RS13510 () | 2839542..2839862 | - | 321 | WP_046852496.1 | antibiotic biosynthesis monooxygenase | - |
| G9395_RS13515 () | 2840079..2840969 | - | 891 | WP_064793788.1 | DMT family transporter | - |
| G9395_RS13520 () | 2841073..2842407 | + | 1335 | WP_064793787.1 | PLP-dependent aminotransferase family protein | - |
| G9395_RS13525 () | 2842584..2843009 | + | 426 | WP_165634125.1 | GNAT family N-acetyltransferase | - |
| G9395_RS13530 () | 2843019..2844035 | + | 1017 | WP_094169092.1 | IS5 family transposase IS5D | Transposase |
| G9395_RS13535 () | 2844376..2844711 | + | 336 | WP_064793785.1 | hypothetical protein | - |
| G9395_RS13540 () | 2845044..2845538 | + | 495 | WP_032687680.1 | DUF1003 domain-containing protein | - |
| G9395_RS13545 () | 2845562..2847436 | + | 1875 | WP_064793784.1 | KUP/HAK/KT family potassium transporter | - |
| G9395_RS13550 () | 2847667..2848149 | + | 483 | WP_032696365.1 | hypothetical protein | - |
| G9395_RS13555 () | 2848996..2849628 | + | 633 | WP_001567369.1 | hypothetical protein | - |
| G9395_RS13560 () | 2849657..2851060 | - | 1404 | WP_001567368.1 | ISNCY family transposase ISKpn21 | Transposase |
| G9395_RS13565 () | 2851384..2852400 | - | 1017 | WP_196770348.1 | alpha/beta hydrolase | - |
| G9395_RS13570 () | 2852573..2853412 | - | 840 | WP_032699836.1 | SDR family oxidoreductase | - |
| G9395_RS13575 () | 2853795..2854148 | + | 354 | WP_032696367.1 | helix-turn-helix transcriptional regulator | - |
| G9395_RS13580 () | 2854386..2855114 | - | 729 | WP_064793783.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| G9395_RS13585 () | 2855263..2855712 | - | 450 | WP_064793782.1 | YhbP family protein | - |
| G9395_RS13590 () | 2855722..2856309 | - | 588 | WP_032699841.1 | isopentenyl-diphosphate Delta-isomerase | - |
| G9395_RS13595 () | 2856362..2857078 | - | 717 | WP_032696191.1 | DUF554 domain-containing protein | - |
| G9395_RS13600 () | 2857088..2857696 | - | 609 | WP_032687711.1 | UbiX family flavin prenyltransferase | - |
| G9395_RS13605 () | 2857708..2859201 | - | 1494 | WP_064793781.1 | UbiD family decarboxylase | - |
| G9395_RS13610 () | 2859466..2860182 | + | 717 | WP_094898635.1 | LysR family transcriptional regulator | - |
| G9395_RS13615 () | 2860364..2861368 | - | 1005 | WP_023307518.1 | IS110 family transposase IS4321 | Transposase |
| G9395_RS13620 () | 2861453..2861692 | + | 240 | WP_179275596.1 | hypothetical protein | - |
| G9395_RS13625 () | 2861928..2862072 | + | 145 | Protein_2669 | DUF2474 domain-containing protein | - |
| G9395_RS13630 () | 2862120..2862689 | - | 570 | WP_032687714.1 | HdeD family acid-resistance protein | - |
| G9395_RS13635 () | 2863059..2864204 | - | 1146 | WP_158491140.1 | mechanosensitive ion channel | - |
| G9395_RS13640 () | 2864313..2864741 | + | 429 | Protein_2672 | RNA polymerase sigma factor RpoH | - |
| G9395_RS13645 () | 2864858..2865304 | - | 447 | WP_032696195.1 | Ivy family C-type lysozyme inhibitor | - |
| G9395_RS13650 () | 2865745..2868180 | + | 2436 | WP_047664896.1 | glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase | - |
| G9395_RS13655 () | 2868442..2868831 | - | 390 | WP_032687717.1 | VOC family protein | - |
| G9395_RS13660 () | 2868833..2870167 | - | 1335 | WP_032696198.1 | putative cyclic di-GMP phosphodiesterase PdeD | VF |
| G9395_RS13665 () | 2870204..2871145 | - | 942 | WP_047664895.1 | ribokinase | - |
| G9395_RS13670 () | 2871157..2871846 | - | 690 | WP_032687720.1 | PTS system mannose-specific EIIAB component | VF |
| G9395_RS13675 () | 2871968..2872768 | - | 801 | WP_032696200.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| G9395_RS13680 () | 2873170..2873883 | + | 714 | WP_032687722.1 | deoxyribose-phosphate aldolase | - |
| G9395_RS13685 () | 2873937..2875442 | + | 1506 | WP_032687723.1 | pentose kinase | - |
| G9395_RS13690 () | 2875510..2876283 | + | 774 | WP_032687725.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| G9395_RS13695 () | 2876562..2877584 | - | 1023 | WP_000156884.1 | IS110 family transposase IS5708 | Transposase |
| G9395_RS13700 () | 2877722..2878600 | - | 879 | WP_032696201.1 | NAD(P)-dependent oxidoreductase | - |
| G9395_RS13705 () | 2878861..2879577 | - | 717 | WP_032687729.1 | ABC transporter ATP-binding protein | - |
| G9395_RS13710 () | 2879574..2880449 | - | 876 | WP_032687730.1 | ATP-binding cassette domain-containing protein | - |
| G9395_RS13715 () | 2880446..2881732 | - | 1287 | WP_032696203.1 | high-affinity branched-chain amino acid ABC transporter permease LivM | - |
| G9395_RS13720 () | 2881743..2882657 | - | 915 | WP_015584333.1 | branched-chain amino acid ABC transporter permease | - |
| G9395_RS13725 () | 2882757..2883815 | - | 1059 | WP_162180097.1 | branched-chain amino acid ABC transporter substrate-binding protein | - |
| G9395_RS13730 () | 2884528..2885934 | + | 1407 | WP_032699891.1 | glycoside hydrolase family 10 protein | - |
| G9395_RS13735 () | 2885867..2887198 | - | 1332 | WP_046852509.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| G9395_RS13740 () | 2887198..2887470 | - | 273 | WP_032696205.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| G9395_RS13745 () | 2887664..2888218 | - | 555 | WP_064793779.1 | RNA polymerase sigma factor | - |
| G9395_RS13750 () | 2888224..2888649 | - | 426 | WP_032687741.1 | hypothetical protein | - |
| G9395_RS13755 () | 2888781..2889734 | - | 954 | WP_032687742.1 | hypothetical protein | - |
| G9395_RS13760 () | 2889950..2890582 | - | 633 | WP_064793778.1 | class I SAM-dependent methyltransferase | - |
| G9395_RS13765 () | 2890602..2891843 | - | 1242 | WP_046852512.1 | sensor domain-containing diguanylate cyclase | - |
| G9395_RS13770 () | 2892064..2893170 | - | 1107 | WP_032687746.1 | DUF4056 domain-containing protein | - |
| G9395_RS13775 () | 2893223..2894182 | - | 960 | WP_032687747.1 | lipoprotein | - |
| G9395_RS13780 () | 2894200..2895327 | - | 1128 | WP_094898529.1 | BamA/TamA family outer membrane protein | - |
| G9395_RS13785 () | 2895789..2896481 | + | 693 | WP_032696212.1 | TenA family protein | - |
| G9395_RS13790 () | 2896478..2897206 | + | 729 | WP_094898528.1 | Protein YobA | VF |
| G9395_RS13795 () | 2897203..2897943 | + | 741 | WP_032687751.1 | ABC transporter permease | - |
| G9395_RS13800 () | 2897953..2898888 | + | 936 | WP_032687753.1 | ABC transporter substrate-binding protein | - |
| G9395_RS13805 () | 2899195..2900580 | + | 1386 | WP_015584344.1 | Exodeoxyribonuclease 10 | VF |
| G9395_RS13810 () | 2900590..2902071 | + | 1482 | WP_165457256.1 | aspartate aminotransferase family protein | - |
| G9395_RS13815 () | 2902295..2902408 | - | 114 | Protein_2707 | cytochrome c biogenesis protein DipZ | - |
| G9395_RS13820 () | 2902410..2902952 | - | 543 | Protein_2708 | alpha/beta fold hydrolase | - |
| G9395_RS13825 () | 2903138..2903878 | - | 741 | WP_032699866.1 | glutamine amidotransferase | - |
| G9395_RS13830 () | 2904053..2905975 | - | 1923 | WP_032699867.1 | penicillin-binding protein 2 | - |
| G9395_RS13835 () | 2906197..2907996 | - | 1800 | WP_064793774.1 | Phosphogluconate dehydratase | VF |
| G9395_RS13840 () | 2907993..2911598 | - | 3606 | WP_064793773.1 | urea carboxylase | - |
| G9395_RS13845 () | 2911767..2912402 | - | 636 | WP_032687758.1 | urea carboxylase-associated family protein | - |
| G9395_RS13850 () | 2912413..2913141 | - | 729 | WP_032696220.1 | urea carboxylase-associated family protein | - |
| G9395_RS13855 () | 2913146..2913925 | - | 780 | WP_032687760.1 | Lipid A biosynthesis myristoyltransferase | VF |
| G9395_RS13860 () | 2913922..2914737 | - | 816 | WP_032696221.1 | ABC transporter permease subunit | - |
| G9395_RS13865 () | 2914762..2915820 | - | 1059 | WP_032687762.1 | putative urea ABC transporter substrate-binding protein | - |
| G9395_RS13870 () | 2916539..2918716 | + | 2178 | WP_032699872.1 | Zinc import ATP-binding protein ZnuC | VF |
| G9395_RS13875 () | 2918768..2919781 | - | 1014 | WP_032687833.1 | cell division protein ZapE | - |
| G9395_RS13880 () | 2920168..2922291 | + | 2124 | WP_064793772.1 | TonB-dependent siderophore receptor | - |
| G9395_RS13885 () | 2922300..2923313 | + | 1014 | WP_032699874.1 | ABC transporter substrate-binding protein | - |
| G9395_RS13890 () | 2923644..2925053 | + | 1410 | WP_064384919.1 | MFS transporter | - |
| G9395_RS13895 () | 2925195..2926076 | - | 882 | WP_032696227.1 | LysR family transcriptional regulator | - |
| G9395_RS13900 () | 2926263..2927063 | + | 801 | WP_064793771.1 | Dihydroneopterin triphosphate diphosphatase | VF |
| G9395_RS13905 () | 2927147..2927767 | + | 621 | WP_080718635.1 | LysE family translocator | - |
| G9395_RS13910 () | 2927814..2930114 | - | 2301 | WP_032696229.1 | FdhF/YdeP family oxidoreductase | - |
| G9395_RS13915 () | 2930329..2931246 | - | 918 | WP_032687771.1 | bestrophin | - |
| G9395_RS13920 () | 2931593..2932549 | - | 957 | WP_047664879.1 | Dyp-type peroxidase | - |
| G9395_RS13925 () | 2932759..2933628 | - | 870 | WP_032696230.1 | DUF2236 domain-containing protein | - |
| G9395_RS13930 () | 2933756..2934187 | - | 432 | WP_032699880.1 | OsmC family protein | - |
| G9395_RS13935 () | 2934528..2935541 | + | 1014 | WP_049264375.1 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase | - |
| G9395_RS13940 () | 2935630..2936865 | + | 1236 | WP_049264376.1 | MFS transporter | - |
| G9395_RS13945 () | 2936920..2938209 | + | 1290 | WP_050496797.1 | Arginine--tRNA ligase | VF |
| G9395_RS13950 () | 2938255..2939301 | + | 1047 | WP_032687778.1 | amidohydrolase | - |
| G9395_RS13955 () | 2939374..2940222 | - | 849 | WP_032687780.1 | DUF2218 domain-containing protein | - |
| G9395_RS13960 () | 2940354..2940734 | - | 381 | WP_032687782.1 | RidA family protein | - |
| G9395_RS13965 () | 2940802..2942139 | - | 1338 | WP_032687783.1 | hypothetical protein | - |
| G9395_RS13970 () | 2942299..2943522 | - | 1224 | WP_094898525.1 | DUF3500 domain-containing protein | - |
| G9395_RS13975 () | 2943522..2944391 | - | 870 | WP_064793768.1 | fumarylacetoacetate hydrolase family protein | - |
| G9395_RS13980 () | 2944402..2944779 | - | 378 | WP_032687786.1 | nuclear transport factor 2 family protein | - |
| G9395_RS13985 () | 2944776..2945558 | - | 783 | WP_165634132.1 | SDR family oxidoreductase | - |
| G9395_RS13990 () | 2945807..2946691 | - | 885 | WP_032687789.1 | LysR family transcriptional regulator | - |
| G9395_RS13995 () | 2946805..2947656 | + | 852 | WP_032687790.1 | MBL fold metallo-hydrolase | - |
| G9395_RS14000 () | 2947720..2949018 | - | 1299 | WP_064384935.1 | glycoside hydrolase family 28 protein | - |
| G9395_RS14005 () | 2949015..2950466 | - | 1452 | WP_077267074.1 | MFS transporter | - |
| G9395_RS14010 () | 2950931..2951071 | + | 141 | WP_004861775.1 | stationary-phase-induced ribosome-associated protein | - |
| G9395_RS14015 () | 2951244..2952941 | + | 1698 | WP_004861771.1 | NAD-dependent malic enzyme | - |
| G9395_RS14020 () | 2953279..2954991 | + | 1713 | WP_064794238.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| G9395_RS14025 () | 2955056..2956033 | - | 978 | WP_064794239.1 | bifunctional helix-turn-helix transcriptional regulator/GNAT family N-acetyltransferase | - |
| G9395_RS14030 () | 2956235..2956834 | - | 600 | WP_032696241.1 | inorganic diphosphatase | - |
| G9395_RS14035 () | 2957091..2958101 | + | 1011 | WP_004861757.1 | alcohol dehydrogenase AdhP | - |
| G9395_RS14040 () | 2958307..2959929 | + | 1623 | WP_064794240.1 | TIGR04028 family ABC transporter substrate-binding protein | - |
| G9395_RS14045 () | 2959940..2960884 | + | 945 | WP_032687797.1 | ABC transporter permease | - |
| G9395_RS14050 () | 2960881..2961732 | + | 852 | WP_064794241.1 | ABC transporter permease | - |
| G9395_RS14055 () | 2961729..2963333 | + | 1605 | WP_064794242.1 | Flagellar transcriptional regulator FlhC | VF |
| G9395_RS14060 () | 2963330..2964319 | + | 990 | WP_064794243.1 | putative FMN-dependent luciferase-like monooxygenase | - |
| G9395_RS14065 () | 2964328..2965422 | + | 1095 | WP_047664868.1 | alkylhydroperoxidase domain protein | - |
| G9395_RS14070 () | 2965419..2966588 | - | 1170 | WP_032696247.1 | MFS transporter AraJ | - |
| G9395_RS14075 () | 2966807..2967139 | - | 333 | WP_032687804.1 | hypothetical protein | - |
| G9395_RS14080 () | 2967440..2968258 | + | 819 | WP_032687805.1 | polyphosphate kinase 2 | - |
| G9395_RS14085 () | 2968418..2968849 | + | 432 | WP_032687806.1 | VOC family protein | - |
| G9395_RS14090 () | 2968886..2969554 | - | 669 | WP_032699915.1 | formate dehydrogenase-N subunit gamma | - |
| G9395_RS14095 () | 2969547..2970431 | - | 885 | WP_032687809.1 | formate dehydrogenase subunit beta | - |
| G9395_RS14100 () | 2970443..2973490 | - | 3048 | WP_143516682.1 | formate dehydrogenase-N subunit alpha | - |
| G9395_RS14105 () | 2973714..2974592 | + | 879 | WP_032699929.1 | aromatic amino acid DMT transporter YddG | - |
| G9395_RS14110 () | 2974589..2975362 | - | 774 | WP_032687814.1 | putative transport protein HsrA | VF |
| G9395_RS14115 () | 2975372..2976385 | - | 1014 | WP_064794246.1 | ring-hydroxylating dioxygenase ferredoxin reductase family protein | - |
| G9395_RS14120 () | 2976395..2976880 | - | 486 | WP_064794247.1 | benzoate 1,2-dioxygenase small subunit | - |
| G9395_RS14125 () | 2976880..2978262 | - | 1383 | WP_094898522.1 | Rieske 2Fe-2S domain-containing protein | - |
| G9395_RS14130 () | 2978404..2979333 | - | 930 | WP_032696249.1 | catechol 1,2-dioxygenase | - |
| G9395_RS14135 () | 2979411..2979701 | - | 291 | WP_032687819.1 | muconolactone Delta-isomerase | - |
| G9395_RS14140 () | 2979721..2980839 | - | 1119 | WP_032687820.1 | muconate cycloisomerase family protein | - |
| G9395_RS14145 () | 2981100..2981897 | + | 798 | WP_032687821.1 | helix-turn-helix domain-containing protein | - |
| G9395_RS14150 () | 2981900..2983390 | - | 1491 | WP_032687823.1 | SmvA family efflux MFS transporter | - |
| G9395_RS14155 () | 2983510..2984100 | + | 591 | WP_032696252.1 | TetR family transcriptional regulator | - |
| G9395_RS14160 () | 2984377..2985765 | + | 1389 | WP_032687826.1 | NarK family nitrate/nitrite MFS transporter | - |
| G9395_RS14165 () | 2985903..2989643 | + | 3741 | WP_064794250.1 | nitrate reductase subunit alpha | - |
| G9395_RS14170 () | 2989640..2991166 | + | 1527 | WP_032696255.1 | nitrate reductase subunit beta | - |
| G9395_RS14175 () | 2991166..2991861 | + | 696 | WP_032687838.1 | nitrate reductase molybdenum cofactor assembly chaperone | - |
| G9395_RS14180 () | 2991858..2992538 | + | 681 | WP_032687839.1 | respiratory nitrate reductase subunit gamma | - |
| G9395_RS14185 () | 2992733..2993005 | + | 273 | WP_032687840.1 | hypothetical protein | - |
| G9395_RS14190 () | 2993051..2993959 | - | 909 | WP_064794268.1 | LysR family transcriptional regulator | - |
| G9395_RS14195 () | 2994064..2994378 | + | 315 | WP_032696258.1 | carboxymuconolactone decarboxylase family protein | - |
| G9395_RS14200 () | 2994389..2994799 | + | 411 | WP_049267646.1 | tautomerase family protein | - |
| G9395_RS14205 () | 2994940..2995785 | - | 846 | WP_046852556.1 | N-hydroxyarylamine O-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|