MGE detailed information
MGE type: Genomic_island MGE length: 9357 bp
Accession: NZ_CP069712 Location: 4238007..4247363 Organism: Escherichia coli strain EA13 Replicon: chromosome
Accession: NZ_CP069712 Location: 4238007..4247363 Organism: Escherichia coli strain EA13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JSQ77_RS20420 () | 4233168..4234469 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| JSQ77_RS20425 () | 4234585..4234923 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| JSQ77_RS20430 () | 4234899..4236596 | + | 1698 | WP_000068928.1 | protein-disulfide reductase DsbD | - |
| JSQ77_RS20435 () | 4236633..4237208 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| JSQ77_RS20445 () | 4238007..4239545 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| JSQ77_RS20450 () | 4239911..4241245 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| JSQ77_RS20455 () | 4241325..4243472 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| JSQ77_RS20460 () | 4243531..4244988 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| JSQ77_RS20465 () | 4245225..4246742 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| JSQ77_RS20470 () | 4246866..4247039 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JSQ77_RS20475 () | 4247067..4247363 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JSQ77_RS20480 () | 4247590..4247862 | - | 273 | WP_000405651.1 | N-acetyltransferase | - |
| JSQ77_RS20485 () | 4247874..4248104 | - | 231 | WP_032202296.1 | (4Fe-4S)-binding protein | - |
| JSQ77_RS20490 () | 4248285..4249916 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| JSQ77_RS20495 () | 4249913..4250632 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.005 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.005 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.005 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.005 |