MGE detailed information
MGE type: Genomic_island MGE length: 77315 bp
Accession: NZ_CP069712 Location: 4020568..4097882 Organism: Escherichia coli strain EA13 Replicon: chromosome
Accession: NZ_CP069712 Location: 4020568..4097882 Organism: Escherichia coli strain EA13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JSQ77_RS19320 () | 4016047..4016550 | - | 504 | WP_000870589.1 | type 1 fimbria minor subunit FimG | - |
| JSQ77_RS19325 () | 4016563..4017093 | - | 531 | WP_001244828.1 | type 1 fimbria minor subunit FimF | - |
| JSQ77_RS19330 () | 4017103..4019739 | - | 2637 | WP_112901543.1 | fimbrial usher FimD | - |
| JSQ77_RS19335 () | 4019806..4020531 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| JSQ77_RS19340 () | 4020568..4021107 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| JSQ77_RS19345 () | 4021172..4021726 | - | 555 | WP_000695589.1 | hypothetical protein | VF |
| JSQ77_RS19350 () | 4022208..4022804 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| JSQ77_RS19355 () | 4023281..4023883 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| JSQ77_RS19360 () | 4024143..4024538 | + | 396 | WP_001360089.1 | hypothetical protein | - |
| JSQ77_RS19365 () | 4025337..4026053 | + | 717 | WP_001360088.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| JSQ77_RS19370 () | 4026073..4027179 | + | 1107 | WP_001353974.1 | N-acetylneuraminate epimerase | - |
| JSQ77_RS19375 () | 4027244..4028224 | + | 981 | WP_001295601.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| JSQ77_RS19380 () | 4028232..4028882 | - | 651 | WP_001037966.1 | HNH endonuclease | - |
| JSQ77_RS19385 () | 4029927..4030073 | - | 147 | WP_001290178.1 | hypothetical protein | - |
| JSQ77_RS19390 () | 4030158..4030355 | - | 198 | WP_001327226.1 | DUF957 domain-containing protein | - |
| JSQ77_RS19395 () | 4030375..4030863 | - | 489 | WP_000761685.1 | hypothetical protein | - |
| JSQ77_RS19400 () | 4030860..4031237 | - | 378 | WP_001094444.1 | TA system toxin CbtA family protein | Toxin Detail |
| JSQ77_RS19405 () | 4031327..4031695 | - | 369 | WP_001285607.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JSQ77_RS19410 () | 4031775..4031996 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| JSQ77_RS19415 () | 4032083..4032559 | - | 477 | WP_001384029.1 | RadC family protein | - |
| JSQ77_RS19420 () | 4032574..4033059 | - | 486 | WP_000213722.1 | antirestriction protein | - |
| JSQ77_RS19425 () | 4033151..4033969 | - | 819 | WP_085668755.1 | DUF945 domain-containing protein | - |
| JSQ77_RS19430 () | 4034059..4034268 | - | 210 | WP_032150870.1 | DUF905 family protein | - |
| JSQ77_RS19435 () | 4034298..4034975 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| JSQ77_RS19440 () | 4035123..4035803 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| JSQ77_RS19445 () | 4036006..4036890 | - | 885 | WP_000010408.1 | 50S ribosome-binding GTPase | - |
| JSQ77_RS19450 () | 4037075..4038205 | + | 1131 | WP_047928958.1 | hypothetical protein | - |
| JSQ77_RS19455 () | 4039684..4040415 | + | 732 | WP_112901544.1 | inovirus Gp2 family protein | - |
| JSQ77_RS19460 () | 4040743..4041621 | + | 879 | WP_000769116.1 | restriction endonuclease | - |
| JSQ77_RS19465 () | 4041675..4042249 | + | 575 | Protein_3802 | transposase | - |
| JSQ77_RS19470 () | 4042382..4043157 | - | 776 | Protein_3803 | DDE-type integrase/transposase/recombinase | - |
| JSQ77_RS19475 () | 4043378..4043818 | + | 441 | WP_000038139.1 | H-NS histone family protein | - |
| JSQ77_RS19480 () | 4044086..4044214 | + | 129 | Protein_3805 | IS256 family transposase | - |
| JSQ77_RS19485 () | 4044244..4044593 | - | 350 | Protein_3806 | transposase | - |
| JSQ77_RS19490 () | 4045599..4046296 | - | 698 | Protein_3807 | IS1 family transposase IS1R | Transposase |
| JSQ77_RS19495 () | 4046534..4047100 | + | 567 | WP_001126809.1 | inovirus-type Gp2 protein | - |
| JSQ77_RS19500 () | 4047347..4047919 | + | 573 | WP_104774288.1 | hypothetical protein | - |
| JSQ77_RS19505 () | 4047988..4048236 | + | 249 | WP_039023560.1 | AlpA family transcriptional regulator | - |
| JSQ77_RS19510 () | 4048487..4049125 | - | 639 | WP_000684812.1 | RpiB/LacA/LacB family sugar-phosphate isomerase | - |
| JSQ77_RS19515 () | 4049398..4050552 | + | 1155 | WP_032297239.1 | oligogalacturonate lyase | - |
| JSQ77_RS19520 () | 4050582..4051382 | + | 801 | WP_000345753.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| JSQ77_RS19525 () | 4051437..4051760 | + | 324 | WP_001696527.1 | cupin domain-containing protein | - |
| JSQ77_RS19535 () | 4053432..4053806 | + | 375 | Protein_3816 | DDE-type integrase/transposase/recombinase | - |
| JSQ77_RS19540 () | 4054318..4055106 | + | 789 | WP_001696174.1 | DeoR family transcriptional regulator | - |
| JSQ77_RS19545 () | 4055224..4055697 | + | 474 | WP_001696173.1 | PTS sugar transporter subunit IIB | - |
| JSQ77_RS19550 () | 4055716..4056486 | + | 771 | WP_001696172.1 | PTS sugar transporter subunit IIC | - |
| JSQ77_RS19555 () | 4056476..4057342 | + | 867 | WP_001767853.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| JSQ77_RS19560 () | 4057352..4057789 | + | 438 | WP_001696170.1 | PTS sugar transporter subunit IIA | - |
| JSQ77_RS19565 () | 4057870..4058904 | + | 1035 | WP_001696169.1 | glycoside hydrolase family 88 protein | - |
| JSQ77_RS19570 () | 4058938..4060395 | + | 1458 | WP_077250607.1 | DUF2264 domain-containing protein | - |
| JSQ77_RS19575 () | 4060440..4061444 | + | 1005 | WP_001767848.1 | hypothetical protein | - |
| JSQ77_RS19580 () | 4061505..4063862 | + | 2358 | WP_001696167.1 | hypothetical protein | VF |
| JSQ77_RS19585 () | 4063872..4066559 | + | 2688 | WP_001696166.1 | autotransporter domain-containing protein | - |
| JSQ77_RS19590 () | 4066595..4066738 | + | 144 | WP_001767846.1 | hypothetical protein | - |
| JSQ77_RS19595 () | 4066906..4067118 | - | 213 | Protein_3828 | transposase | - |
| JSQ77_RS19605 () | 4068370..4069209 | - | 840 | WP_201286219.1 | IS3 family transposase ISKpn38 | Transposase |
| JSQ77_RS19610 () | 4069271..4069465 | + | 195 | Protein_3831 | IS66 family transposase ISEc23 | Transposase |
| JSQ77_RS19615 () | 4069561..4070838 | - | 1278 | WP_000610829.1 | ISL3 family transposase ISPst2 | Transposase |
| JSQ77_RS19620 () | 4070851..4071885 | - | 1035 | WP_029396327.1 | permease | - |
| JSQ77_RS19625 () | 4071997..4072311 | + | 315 | WP_000349485.1 | helix-turn-helix domain-containing protein | - |
| JSQ77_RS19630 () | 4072582..4072689 | + | 108 | Protein_3835 | IS66 family insertion sequence element accessory protein TnpB | - |
| JSQ77_RS19635 () | 4072686..4073036 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| JSQ77_RS19640 () | 4073067..4074458 | + | 1392 | Protein_3837 | IS66 family transposase ISEc23 | Transposase |
| JSQ77_RS19645 () | 4074585..4075109 | + | 525 | WP_104774277.1 | hypothetical protein | VF |
| JSQ77_RS19650 () | 4075238..4075462 | - | 225 | WP_104774278.1 | hypothetical protein | - |
| JSQ77_RS19655 () | 4076710..4077030 | + | 321 | WP_001334006.1 | IS3 family transposase | - |
| JSQ77_RS19660 () | 4077704..4078318 | - | 615 | Protein_3841 | hypothetical protein | VF |
| JSQ77_RS19665 () | 4078369..4079582 | + | 1214 | WP_162842841.1 | IS3 family transposase IS629 | Transposase |
| JSQ77_RS19670 () | 4079765..4080388 | + | 624 | WP_001470157.1 | hypothetical protein | - |
| JSQ77_RS19675 () | 4080523..4082113 | - | 1591 | Protein_3844 | IS3 family transposase | - |
| JSQ77_RS19680 () | 4082222..4082422 | + | 201 | WP_012311738.1 | hypothetical protein | - |
| JSQ77_RS19685 () | 4082512..4082898 | + | 387 | WP_001342709.1 | hypothetical protein | - |
| JSQ77_RS19690 () | 4082956..4083990 | - | 1035 | WP_000774671.1 | virulence RhuM family protein | - |
| JSQ77_RS19695 () | 4084026..4084865 | - | 840 | WP_000350135.1 | hypothetical protein | - |
| JSQ77_RS19700 () | 4084868..4085422 | - | 555 | WP_001090220.1 | hypothetical protein | - |
| JSQ77_RS19705 () | 4085422..4088658 | - | 3237 | WP_000718842.1 | type I restriction endonuclease subunit R | - |
| JSQ77_RS19710 () | 4088658..4089944 | - | 1287 | WP_000991122.1 | restriction endonuclease subunit S | - |
| JSQ77_RS19715 () | 4089944..4091923 | - | 1980 | WP_001053122.1 | type I restriction-modification system subunit M | - |
| JSQ77_RS19720 () | 4091990..4092487 | - | 498 | WP_000648433.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| JSQ77_RS19725 () | 4092760..4093457 | + | 698 | Protein_3854 | IS1 family transposase | - |
| JSQ77_RS19730 () | 4093474..4093650 | - | 177 | Protein_3855 | integrase | - |
| JSQ77_RS19735 () | 4093880..4094620 | + | 741 | WP_001477155.1 | porin family protein | - |
| JSQ77_RS19740 () | 4094794..4096293 | + | 1500 | WP_104774204.1 | phosphoethanolamine transferase | - |
| JSQ77_RS19745 () | 4096617..4097882 | - | 1266 | WP_001218930.1 | hypothetical protein ; Integrase | Integrase |
| JSQ77_RS19755 () | 4098349..4099368 | + | 1020 | WP_000061766.1 | NADPH-dependent aldehyde reductase Ahr | - |
| JSQ77_RS19760 () | 4099372..4099935 | - | 564 | WP_000896741.1 | gluconokinase | - |
| JSQ77_RS19765 () | 4100152..4101183 | + | 1032 | WP_001197410.1 | L-idonate 5-dehydrogenase | - |
| JSQ77_RS19770 () | 4101207..4101971 | + | 765 | WP_000998695.1 | gluconate 5-dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|