MGE detailed information
MGE type: Prophage MGE length: 34960 bp
Accession: NZ_CP069712 Location: 2555302..2590261 Organism: Escherichia coli strain EA13 Replicon: chromosome
Accession: NZ_CP069712 Location: 2555302..2590261 Organism: Escherichia coli strain EA13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JSQ77_RS12255 () | 2552041..2553174 | + | 1134 | WP_000837924.1 | porin OmpN | - |
| JSQ77_RS12260 () | 2553315..2553749 | + | 435 | WP_001300461.1 | universal stress protein UspF | - |
| JSQ77_RS12265 () | 2554015..2554188 | - | 174 | WP_001157925.1 | hypothetical protein | - |
| JSQ77_RS12270 () | 2554528..2554641 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| JSQ77_RS12275 () | 2554710..2554943 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| JSQ77_RS12280 () | 2555302..2555999 | + | 698 | Protein_2405 | IS1 family transposase IS1A | Transposase |
| JSQ77_RS12285 () | 2556013..2556360 | - | 348 | Protein_2406 | DNA-binding protein | - |
| JSQ77_RS12290 () | 2556363..2557664 | - | 1302 | WP_112901581.1 | terminase family protein | - |
| JSQ77_RS12295 () | 2557645..2558739 | - | 1095 | WP_000089447.1 | terminase small subunit | - |
| JSQ77_RS12300 () | 2558743..2558994 | - | 252 | WP_000613571.1 | hypothetical protein | - |
| JSQ77_RS12305 () | 2558930..2559862 | - | 933 | WP_001204037.1 | hypothetical protein | - |
| JSQ77_RS12310 () | 2559855..2560646 | - | 792 | WP_001291094.1 | ParB/Srx family N-terminal domain-containing protein | - |
| JSQ77_RS12315 () | 2560784..2562241 | - | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| JSQ77_RS12320 () | 2562438..2562623 | - | 186 | WP_001228688.1 | prophage lysis lipoprotein RzoD | - |
| JSQ77_RS12325 () | 2562840..2563337 | - | 498 | WP_001351713.1 | lysozyme RrrD | - |
| JSQ77_RS12330 () | 2563337..2563552 | - | 216 | WP_000839565.1 | phage lysis protein EssD | - |
| JSQ77_RS12335 () | 2563804..2564178 | - | 375 | WP_001348108.1 | hypothetical protein | - |
| JSQ77_RS12340 () | 2564350..2564778 | - | 429 | WP_000506936.1 | cell envelope integrity protein TolA | - |
| JSQ77_RS12345 () | 2565823..2566365 | - | 543 | WP_000640161.1 | DUF1133 family protein | - |
| JSQ77_RS12350 () | 2566362..2566652 | - | 291 | WP_000247763.1 | DUF1364 domain-containing protein | - |
| JSQ77_RS12355 () | 2566652..2567251 | - | 600 | WP_025670565.1 | DUF1367 family protein | - |
| JSQ77_RS12360 () | 2567720..2567875 | - | 156 | WP_000813269.1 | type I toxin-antitoxin system toxin HokD | - |
| JSQ77_RS12365 () | 2567947..2568234 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| JSQ77_RS12370 () | 2568234..2568473 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| JSQ77_RS12375 () | 2568498..2568803 | + | 306 | WP_071600497.1 | hypothetical protein | - |
| JSQ77_RS12380 () | 2569006..2569338 | + | 333 | WP_001349760.1 | FlxA-like family protein | - |
| JSQ77_RS12390 () | 2571085..2572347 | - | 1263 | WP_112901435.1 | ISNCY family transposase ISCARN112 | Transposase |
| JSQ77_RS12395 () | 2573146..2574345 | + | 1200 | WP_001117227.1 | MFS transporter | - |
| JSQ77_RS12400 () | 2574357..2575049 | + | 693 | WP_000957772.1 | gamma-glutamylcyclotransferase | - |
| JSQ77_RS12405 () | 2575046..2575927 | + | 882 | WP_000019009.1 | LysR family transcriptional regulator | - |
| JSQ77_RS12410 () | 2576058..2577334 | - | 1277 | Protein_2431 | DUF2254 domain-containing protein | - |
| JSQ77_RS12415 () | 2577398..2579395 | - | 1998 | WP_001676522.1 | choline BCCT transporter BetT | - |
| JSQ77_RS12420 () | 2579736..2580158 | - | 423 | WP_001151151.1 | DUF977 family protein | - |
| JSQ77_RS12425 () | 2580199..2581269 | - | 1071 | WP_069722905.1 | phage replisome organizer | - |
| JSQ77_RS12430 () | 2581341..2581766 | - | 426 | WP_000693836.1 | Rha family transcriptional regulator | - |
| JSQ77_RS12435 () | 2581750..2582031 | - | 282 | WP_000391949.1 | helix-turn-helix domain-containing protein | - |
| JSQ77_RS12440 () | 2582132..2582551 | + | 420 | WP_000362155.1 | hypothetical protein | - |
| JSQ77_RS12445 () | 2582950..2583105 | + | 156 | WP_001169151.1 | YdaF family protein | - |
| JSQ77_RS12450 () | 2583102..2583590 | - | 489 | WP_063856386.1 | superinfection exclusion B family protein | - |
| JSQ77_RS12455 () | 2584032..2584253 | + | 222 | WP_000560223.1 | killing protein KilR | - |
| JSQ77_RS12460 () | 2584253..2584423 | + | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| JSQ77_RS12465 () | 2584498..2584773 | + | 276 | WP_000632297.1 | protein RacC | - |
| JSQ77_RS12470 () | 2584875..2587475 | + | 2601 | WP_024232464.1 | exodeoxyribonuclease VIII | - |
| JSQ77_RS12475 () | 2587468..2588277 | + | 810 | WP_000166319.1 | recombination protein RecT | - |
| JSQ77_RS12480 () | 2588334..2588528 | + | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| JSQ77_RS12485 () | 2588521..2588730 | + | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 2588527..2588705 | - | 179 | NuclAT_0 | - | - |
| - () | 2588527..2588705 | - | 179 | NuclAT_0 | - | - |
| - () | 2588527..2588705 | - | 179 | NuclAT_0 | - | - |
| - () | 2588527..2588705 | - | 179 | NuclAT_0 | - | - |
| JSQ77_RS12490 () | 2588809..2589024 | + | 216 | WP_000079604.1 | excisionase XisR | - |
| JSQ77_RS12495 () | 2589026..2590261 | + | 1236 | WP_112901434.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| JSQ77_RS12500 () | 2590313..2591248 | + | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| JSQ77_RS12505 () | 2591377..2592750 | - | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| JSQ77_RS12510 () | 2593228..2594211 | - | 984 | WP_000387388.1 | zinc transporter ZntB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|