MGE detailed information
MGE type: Prophage MGE length: 78617 bp
Accession: NZ_CP069709 Location: 2186779..2265395 Organism: Escherichia coli strain EA7 Replicon: chromosome
Accession: NZ_CP069709 Location: 2186779..2265395 Organism: Escherichia coli strain EA7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JSQ43_RS10935 () | 2182678..2183898 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| JSQ43_RS10940 () | 2184023..2184718 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| JSQ43_RS10945 () | 2184671..2185963 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| JSQ43_RS10950 () | 2186122..2186736 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| JSQ43_RS10955 () | 2186779..2187633 | - | 855 | WP_072662656.1 | dimethyl sulfoxide reductase anchor subunit | - |
| JSQ43_RS10960 () | 2187635..2188252 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| JSQ43_RS10965 () | 2188263..2190686 | - | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| JSQ43_RS10970 () | 2190747..2193173 | - | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| JSQ43_RS10975 () | 2193372..2193677 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| JSQ43_RS10980 () | 2193785..2194495 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| JSQ43_RS10985 () | 2194498..2195058 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| JSQ43_RS10990 () | 2195093..2195434 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| JSQ43_RS10995 () | 2195569..2195895 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| JSQ43_RS11000 () | 2196101..2197315 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| JSQ43_RS11005 () | 2197327..2198346 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| JSQ43_RS11010 () | 2198404..2198514 | + | 111 | WP_021531328.1 | hypothetical protein | - |
| JSQ43_RS11015 () | 2198534..2199814 | - | 1281 | WP_000876979.1 | Putative defective protein IntQ ; Integrase | Integrase |
| JSQ43_RS11020 () | 2199849..2200100 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| JSQ43_RS11025 () | 2200173..2202644 | - | 2472 | WP_001515375.1 | exonuclease | - |
| JSQ43_RS11030 () | 2202738..2202929 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| JSQ43_RS11035 () | 2202926..2203114 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| JSQ43_RS11040 () | 2203682..2203900 | - | 219 | WP_001171952.1 | hypothetical protein | - |
| JSQ43_RS11045 () | 2204060..2204215 | - | 156 | WP_000379588.1 | DUF1391 family protein | - |
| JSQ43_RS11050 () | 2204384..2204791 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| JSQ43_RS11055 () | 2204873..2205100 | + | 228 | WP_000921596.1 | transcriptional regulator | - |
| JSQ43_RS11060 () | 2205084..2205605 | + | 522 | WP_000705355.1 | hypothetical protein | - |
| JSQ43_RS11065 () | 2205586..2206551 | + | 966 | WP_152923826.1 | hypothetical protein | - |
| JSQ43_RS11070 () | 2206592..2207014 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| JSQ43_RS11075 () | 2207011..2207367 | + | 357 | WP_001315552.1 | class I SAM-dependent methyltransferase | - |
| JSQ43_RS11080 () | 2207630..2207812 | + | 183 | Protein_2080 | hypothetical protein | - |
| JSQ43_RS11085 () | 2207978..2208264 | + | 287 | Protein_2081 | hypothetical protein | - |
| JSQ43_RS11090 () | 2209033..2210373 | + | 1341 | WP_105075516.1 | ISNCY family transposase ISCARN112 | Transposase |
| JSQ43_RS11095 () | 2210810..2211142 | - | 333 | WP_001301033.1 | protein FlxA | - |
| JSQ43_RS11100 () | 2211345..2211650 | - | 306 | WP_071593935.1 | hypothetical protein | - |
| JSQ43_RS11105 () | 2211675..2211914 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| JSQ43_RS11110 () | 2211914..2212201 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| JSQ43_RS11115 () | 2212273..2212428 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| JSQ43_RS11120 () | 2212645..2212896 | + | 252 | WP_001463433.1 | hypothetical protein | - |
| JSQ43_RS11125 () | 2212963..2213241 | + | 279 | WP_001515373.1 | hypothetical protein | - |
| JSQ43_RS11130 () | 2213243..2214292 | + | 1050 | WP_001515372.1 | DUF968 domain-containing protein | - |
| JSQ43_RS11135 () | 2214310..2214687 | + | 378 | WP_001204787.1 | antitermination protein | - |
| JSQ43_RS11140 () | 2214843..2215367 | - | 525 | WP_105907874.1 | outer membrane lipoprotein Blc | - |
| JSQ43_RS11145 () | 2215560..2216519 | + | 960 | WP_105075652.1 | DUF523 and DUF1722 domain-containing protein | - |
| JSQ43_RS11150 () | 2216926..2217639 | + | 714 | WP_001146314.1 | HTH-type transcriptional regulator GadW | VF |
| JSQ43_RS11155 () | 2217830..2218045 | + | 216 | WP_001515371.1 | phage lysis protein EssD | - |
| JSQ43_RS11160 () | 2218050..2218364 | + | 315 | WP_001515370.1 | YdfR family protein | - |
| JSQ43_RS11165 () | 2218420..2218953 | + | 534 | WP_001515369.1 | lysozyme | - |
| JSQ43_RS11170 () | 2218950..2219447 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| JSQ43_RS11175 () | 2219809..2220021 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| JSQ43_RS11180 () | 2220032..2220220 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| JSQ43_RS11185 () | 2220223..2220288 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| JSQ43_RS11190 () | 2220367..2220522 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| JSQ43_RS11195 () | 2220694..2220867 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| JSQ43_RS11200 () | 2221019..2221429 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| JSQ43_RS11205 () | 2221487..2221720 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| JSQ43_RS11210 () | 2222109..2222654 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| JSQ43_RS11215 () | 2222629..2224554 | + | 1926 | WP_001027297.1 | phage terminase large subunit family protein | - |
| JSQ43_RS11220 () | 2224551..2224757 | + | 207 | WP_000198149.1 | gpW family protein | - |
| JSQ43_RS11225 () | 2224754..2226355 | + | 1602 | WP_001345555.1 | phage portal protein | - |
| JSQ43_RS11230 () | 2226336..2227655 | + | 1320 | WP_204147981.1 | S49 family peptidase | - |
| JSQ43_RS11235 () | 2227665..2227997 | + | 333 | WP_001338090.1 | head decoration protein | - |
| JSQ43_RS11240 () | 2228053..2229078 | + | 1026 | WP_000063271.1 | major capsid protein | - |
| JSQ43_RS11245 () | 2229120..2229515 | + | 396 | WP_105075587.1 | DNA-packaging protein FI | - |
| JSQ43_RS11250 () | 2229527..2229880 | + | 354 | WP_000752975.1 | head-tail joining protein | - |
| JSQ43_RS11255 () | 2229892..2230470 | + | 579 | WP_105075588.1 | phage tail protein | - |
| JSQ43_RS11260 () | 2230467..2230862 | + | 396 | WP_000683138.1 | phage minor tail U family protein | - |
| JSQ43_RS11265 () | 2230870..2231610 | + | 741 | WP_021514938.1 | phage tail protein | - |
| JSQ43_RS11270 () | 2231626..2232048 | + | 423 | WP_000479155.1 | phage minor tail protein G | - |
| JSQ43_RS11275 () | 2232030..2232464 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| JSQ43_RS11280 () | 2232457..2235036 | + | 2580 | WP_105075589.1 | phage tail tape measure protein | - |
| JSQ43_RS11285 () | 2235033..2235362 | + | 330 | WP_000847331.1 | phage tail protein | - |
| JSQ43_RS11290 () | 2235362..2236060 | + | 699 | WP_001152624.1 | phage minor tail protein L | - |
| JSQ43_RS11295 () | 2236066..2236809 | + | 744 | WP_000194780.1 | C40 family peptidase | - |
| JSQ43_RS11300 () | 2236746..2237378 | + | 633 | WP_000090891.1 | tail assembly protein | - |
| JSQ43_RS11305 () | 2237439..2240837 | + | 3399 | WP_105907867.1 | host specificity protein J | - |
| JSQ43_RS11310 () | 2240904..2241503 | + | 600 | WP_001230374.1 | Outer membrane protein X | VF |
| JSQ43_RS11315 () | 2241568..2244591 | + | 3024 | WP_105075592.1 | prophage tail fiber N-terminal domain-containing protein | - |
| JSQ43_RS11320 () | 2244591..2245166 | + | 576 | WP_000885614.1 | tail fiber assembly protein | - |
| JSQ43_RS11325 () | 2245264..2245854 | - | 591 | WP_105075591.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| JSQ43_RS11330 () | 2246171..2246404 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| JSQ43_RS11335 () | 2246473..2246586 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| JSQ43_RS11340 () | 2247188..2248471 | + | 1284 | Protein_2132 | MHS family MFS transporter YdfJ | - |
| JSQ43_RS11345 () | 2248560..2250020 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| JSQ43_RS11350 () | 2250055..2250258 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| JSQ43_RS11355 () | 2250435..2251121 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| JSQ43_RS11360 () | 2251210..2251956 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| JSQ43_RS11365 () | 2252093..2254138 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| JSQ43_RS11370 () | 2254182..2254700 | - | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
| JSQ43_RS11375 () | 2254978..2255370 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| JSQ43_RS11380 () | 2255625..2256464 | + | 840 | WP_105075535.1 | diguanylate cyclase DgcZ | - |
| JSQ43_RS11385 () | 2256734..2256829 | - | 96 | WP_000901367.1 | protein MgtS | - |
| JSQ43_RS11390 () | 2256956..2258143 | - | 1188 | WP_204147982.1 | efflux MFS transporter YdeE | - |
| JSQ43_RS11395 () | 2258338..2259237 | + | 900 | WP_000087211.1 | O-acetylserine/cysteine exporter | - |
| JSQ43_RS11400 () | 2259268..2259486 | - | 219 | WP_000803653.1 | multiple antibiotic resistance protein MarB | - |
| JSQ43_RS11405 () | 2259518..2259901 | - | 384 | WP_000091199.1 | Multiple antibiotic resistance protein MarA | VF |
| JSQ43_RS11410 () | 2259922..2260356 | - | 435 | WP_204147983.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| JSQ43_RS11415 () | 2260576..2260896 | + | 321 | WP_000273128.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JSQ43_RS11420 () | 2260886..2261170 | + | 285 | WP_000268704.1 | helix-turn-helix domain-containing protein | - |
| JSQ43_RS11425 () | 2261291..2261956 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| JSQ43_RS11430 () | 2261981..2263171 | - | 1191 | WP_032259591.1 | L-arabinose MFS transporter | - |
| JSQ43_RS11435 () | 2263321..2264436 | - | 1116 | WP_000258600.1 | putative protein YneK | - |
| JSQ43_RS11440 () | 2264514..2265395 | - | 882 | WP_000366501.1 | HTH-type transcriptional regulator GltR | VF |
| JSQ43_RS11445 () | 2265496..2266884 | + | 1389 | WP_001338596.1 | succinate-semialdehyde dehydrogenase | - |
| JSQ43_RS11450 () | 2266948..2267874 | + | 927 | WP_000257409.1 | glutaminase B | - |
| JSQ43_RS11455 () | 2267874..2268233 | + | 360 | WP_001191019.1 | DUF4186 domain-containing protein | - |
| JSQ43_RS11460 () | 2268306..2269292 | + | 987 | Protein_2156 | GGDEF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|