MGE detailed information
MGE type: Conjugative plasmid MGE length: 74912 bp
Accession: NZ_CP069668 Location: 1..74912 Organism: Escherichia coli O89m:H9 strain MIN11 Replicon: plasmid pMUB-MIN11-2
Accession: NZ_CP069668 Location: 1..74912 Organism: Escherichia coli O89m:H9 strain MIN11 Replicon: plasmid pMUB-MIN11-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JSU13_RS23290 (1) | 1..858 | + | 858 | WP_033803063.1 | incFII family plasmid replication initiator RepA | - |
| JSU13_RS23295 (1561) | 1561..1701 | + | 141 | WP_000829596.1 | hypothetical protein | - |
| JSU13_RS23300 (1774) | 1774..2043 | + | 270 | WP_000079945.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| JSU13_RS23305 (2043) | 2043..2321 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| JSU13_RS23310 (2393) | 2393..2571 | + | 179 | Protein_4 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JSU13_RS23315 (2642) | 2642..3523 | + | 882 | WP_000005460.1 | hypothetical protein | - |
| JSU13_RS23320 (3458) | 3458..3877 | - | 420 | WP_024181414.1 | hypothetical protein | - |
| JSU13_RS23325 (3986) | 3986..4336 | - | 351 | WP_001414994.1 | plasmid partitioning/stability family protein | - |
| JSU13_RS23330 (4339) | 4339..5301 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| JSU13_RS24390 (5472) | 5472..5741 | + | 270 | WP_072126982.1 | hypothetical protein | - |
| JSU13_RS23335 (5836) | 5836..6738 | + | 903 | WP_208207793.1 | DUF1281 domain-containing protein | - |
| JSU13_RS23340 (6735) | 6735..7046 | + | 312 | WP_032144809.1 | hypothetical protein | - |
| JSU13_RS23345 (7123) | 7123..7806 | + | 684 | WP_000085884.1 | DNA methylase | - |
| JSU13_RS23350 (7807) | 7807..8028 | + | 222 | WP_001104865.1 | hypothetical protein | - |
| JSU13_RS23355 (7958) | 7958..8476 | + | 519 | WP_223156508.1 | DUF1380 family protein | - |
| JSU13_RS23360 (8521) | 8521..9291 | + | 771 | WP_001006247.1 | hypothetical protein | - |
| JSU13_RS23365 (9707) | 9707..10132 | + | 426 | WP_001198895.1 | antirestriction protein | - |
| JSU13_RS23370 (10179) | 10179..10601 | + | 423 | WP_000271709.1 | DUF1380 family protein | - |
| JSU13_RS23375 (10598) | 10598..10789 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| JSU13_RS23380 (11109) | 11109..11702 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| JSU13_RS23385 (11815) | 11815..13020 | - | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| JSU13_RS23390 (13102) | 13102..13725 | + | 624 | WP_208207790.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| JSU13_RS23395 (13715) | 13715..13939 | + | 225 | WP_021503354.1 | hypothetical protein | - |
| JSU13_RS24395 (13937) | 13937..14140 | - | 204 | Protein_23 | hypothetical protein | - |
| JSU13_RS23400 (14603) | 14603..14833 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| JSU13_RS23405 (14885) | 14885..16246 | + | 1362 | WP_000170673.1 | DUF3560 domain-containing protein | - |
| JSU13_RS24400 (16293) | 16293..16854 | + | 562 | Protein_26 | class I SAM-dependent methyltransferase | - |
| JSU13_RS23420 (17005) | 17005..17301 | + | 297 | WP_077694982.1 | hypothetical protein | - |
| JSU13_RS23425 (17774) | 17774..18301 | + | 528 | WP_000290816.1 | single-stranded DNA-binding protein | - |
| JSU13_RS23430 (18460) | 18460..19707 | + | 1248 | WP_000414651.1 | site-specific integrase | - |
| JSU13_RS23435 (19694) | 19694..21232 | + | 1539 | WP_001333349.1 | site-specific integrase | - |
| JSU13_RS23440 (21249) | 21249..23282 | + | 2034 | WP_000807722.1 | hypothetical protein | - |
| JSU13_RS23445 (23275) | 23275..23694 | + | 420 | WP_001062122.1 | hypothetical protein | - |
| JSU13_RS23450 (23770) | 23770..28533 | + | 4764 | WP_000240574.1 | AVAST type 4 anti-phage nuclease Avs4 | - |
| JSU13_RS23455 (29072) | 29072..29893 | - | 822 | WP_001272932.1 | abortive infection system antitoxin AbiGi family protein | - |
| JSU13_RS23460 (30258) | 30258..30491 | + | 234 | WP_000005975.1 | DUF905 domain-containing protein | - |
| JSU13_RS23465 (30550) | 30550..32508 | + | 1959 | WP_001145496.1 | ParB/RepB/Spo0J family partition protein | - |
| JSU13_RS23470 (32563) | 32563..32997 | + | 435 | WP_000845966.1 | conjugation system SOS inhibitor PsiB | - |
| JSU13_RS23475 (32994) | 32994..33713 | + | 720 | WP_000994097.1 | plasmid SOS inhibition protein A | - |
| JSU13_RS23480 (33710) | 33710..34024 | + | 315 | WP_000870669.1 | hypothetical protein | - |
| - (33981) | 33981..34180 | + | 200 | NuclAT_0 | - | - |
| - (33981) | 33981..34180 | + | 200 | NuclAT_0 | - | - |
| - (33981) | 33981..34180 | + | 200 | NuclAT_0 | - | - |
| - (33981) | 33981..34180 | + | 200 | NuclAT_0 | - | - |
| - (33981) | 33981..34180 | - | 200 | NuclAT_0 | - | - |
| JSU13_RS24405 (34214) | 34214..34327 | + | 114 | Protein_40 | DUF5431 family protein | - |
| JSU13_RS23485 (34272) | 34272..34394 | + | 123 | WP_223163518.1 | Hok/Gef family protein | - |
| JSU13_RS23490 (34695) | 34695..34944 | - | 250 | Protein_42 | hypothetical protein | - |
| JSU13_RS23495 (35240) | 35240..35563 | + | 324 | WP_000533253.1 | hypothetical protein | - |
| JSU13_RS23500 (35622) | 35622..35864 | + | 243 | WP_000540588.1 | hypothetical protein | - |
| JSU13_RS23505 (36130) | 36130..36372 | + | 243 | WP_208207792.1 | hypothetical protein | - |
| JSU13_RS23510 (36843) | 36843..37139 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| JSU13_RS23515 (37249) | 37249..38070 | + | 822 | WP_001234437.1 | DUF932 domain-containing protein | - |
| JSU13_RS23520 (38366) | 38366..39013 | - | 648 | WP_143361368.1 | hypothetical protein | VF |
| JSU13_RS23525 (39290) | 39290..39673 | + | 384 | WP_000124979.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| JSU13_RS23530 (39864) | 39864..40550 | + | 687 | WP_000332493.1 | PAS domain-containing protein | - |
| JSU13_RS23535 (40644) | 40644..40871 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| JSU13_RS23540 (40905) | 40905..41267 | + | 363 | WP_001098998.1 | type IV conjugative transfer system pilin TraA | - |
| JSU13_RS23545 (41272) | 41272..41583 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| JSU13_RS23550 (41605) | 41605..42171 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| JSU13_RS23555 (42158) | 42158..42886 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| JSU13_RS23560 (42886) | 42886..44313 | + | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| JSU13_RS23565 (44303) | 44303..44893 | + | 591 | WP_000002792.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| JSU13_RS23570 (44880) | 44880..45077 | + | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| JSU13_RS23575 (45089) | 45089..45340 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| JSU13_RS23580 (45337) | 45337..45852 | + | 516 | WP_208207787.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JSU13_RS23585 (45987) | 45987..46208 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| JSU13_RS23590 (46368) | 46368..48995 | + | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| JSU13_RS23595 (48992) | 48992..49378 | + | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| JSU13_RS23600 (49375) | 49375..50007 | + | 633 | WP_033803053.1 | type-F conjugative transfer system protein TraW | - |
| JSU13_RS23605 (50004) | 50004..50996 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| JSU13_RS23610 (51022) | 51022..51486 | + | 465 | WP_033803054.1 | hypothetical protein | - |
| JSU13_RS23615 (51497) | 51497..51811 | + | 315 | WP_033803055.1 | hypothetical protein | - |
| JSU13_RS23620 (51804) | 51804..52256 | + | 453 | WP_027663276.1 | hypothetical protein | - |
| JSU13_RS23625 (52284) | 52284..52922 | + | 639 | WP_033803056.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JSU13_RS23630 (52919) | 52919..54727 | + | 1809 | WP_033803057.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JSU13_RS23635 (54754) | 54754..55011 | + | 258 | WP_033803058.1 | conjugal transfer protein TrbE | - |
| JSU13_RS23640 (55004) | 55004..55747 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JSU13_RS23645 (55763) | 55763..56110 | + | 348 | WP_001287906.1 | conjugal transfer protein TrbA | - |
| JSU13_RS23650 (56229) | 56229..56513 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JSU13_RS23655 (56500) | 56500..57045 | + | 546 | WP_033803059.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JSU13_RS23660 (56975) | 56975..57337 | + | 363 | WP_071598071.1 | P-type conjugative transfer protein TrbJ | - |
| JSU13_RS23665 (57337) | 57337..58710 | + | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| JSU13_RS23670 (58707) | 58707..61532 | + | 2826 | WP_208207788.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| JSU13_RS23675 (61529) | 61529..62038 | + | 510 | WP_033560250.1 | conjugal transfer entry exclusion protein TraS | - |
| JSU13_RS23680 (62052) | 62052..62783 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| JSU13_RS23685 (63036) | 63036..65252 | + | 2217 | WP_201482104.1 | type IV conjugative transfer system coupling protein TraD | - |
| JSU13_RS23690 (65252) | 65252..70522 | + | 5271 | WP_208207789.1 | Multifunctional conjugation protein TraI | Relaxase |
| JSU13_RS23695 (70542) | 70542..71288 | + | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| JSU13_RS23700 (71343) | 71343..71903 | + | 561 | WP_054412945.1 | fertility inhibition protein FinO | - |
| JSU13_RS23705 (72035) | 72035..72247 | + | 213 | WP_033803062.1 | ANR family transcriptional regulator | - |
| JSU13_RS23710 (72534) | 72534..73211 | + | 678 | WP_000392235.1 | PIN domain-containing protein | - |
| JSU13_RS23715 (73531) | 73531..74121 | + | 591 | WP_024228807.1 | DUF2726 domain-containing protein | - |
| JSU13_RS23720 (74361) | 74361..74621 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| JSU13_RS24410 (74715) | 74715..74900 | + | 186 | Protein_89 | plasmid copy control protein CopA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|