MGE detailed information
MGE type: Prophage MGE length: 67453 bp
Accession: NZ_CP069666 Location: 3882935..3950387 Organism: Escherichia coli O89m:H9 strain MIN11 Replicon: chromosome
Accession: NZ_CP069666 Location: 3882935..3950387 Organism: Escherichia coli O89m:H9 strain MIN11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JSU13_RS18530 (3878054) | 3878054..3879127 | - | 1074 | WP_001299187.1 | patatin family protein | - |
| JSU13_RS18535 (3879249) | 3879249..3879410 | - | 162 | WP_000490275.1 | DUF1328 domain-containing protein | - |
| JSU13_RS18540 (3879537) | 3879537..3880142 | - | 606 | WP_001295410.1 | molecular chaperone OsmY | - |
| JSU13_RS18545 (3880535) | 3880535..3882121 | - | 1587 | WP_000202564.1 | peptide chain release factor 3 | - |
| JSU13_RS18550 (3882341) | 3882341..3882601 | + | 261 | WP_024248132.1 | DinI-like family protein | - |
| JSU13_RS18555 (3882959) | 3882959..3884563 | + | 1605 | WP_047627604.1 | Trehalose-6-phosphate synthase | VF |
| JSU13_RS18560 (3884762) | 3884762..3884938 | - | 177 | Protein_3675 | recombinase family protein | - |
| JSU13_RS18565 (3885008) | 3885008..3885592 | - | 585 | WP_047627606.1 | tail fiber assembly protein | - |
| JSU13_RS18570 (3885592) | 3885592..3888750 | - | 3159 | WP_208207754.1 | prophage tail fiber N-terminal domain-containing protein | - |
| JSU13_RS18575 (3888815) | 3888815..3889414 | - | 600 | WP_001230375.1 | hypothetical protein | VF |
| JSU13_RS18580 (3889484) | 3889484..3892981 | - | 3498 | WP_000515714.1 | host specificity protein J | - |
| JSU13_RS18585 (3893042) | 3893042..3893614 | - | 573 | WP_000847669.1 | tail assembly protein | - |
| JSU13_RS18590 (3893611) | 3893611..3894354 | - | 744 | WP_208207755.1 | C40 family peptidase | - |
| JSU13_RS18595 (3894360) | 3894360..3895058 | - | 699 | WP_001152385.1 | phage minor tail protein L | - |
| JSU13_RS18600 (3895068) | 3895068..3895397 | - | 330 | WP_000447248.1 | phage tail protein | - |
| JSU13_RS18605 (3895397) | 3895397..3898462 | - | 3066 | WP_000372001.1 | phage tail tape measure protein | - |
| JSU13_RS18610 (3898434) | 3898434..3898763 | - | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| JSU13_RS18615 (3898772) | 3898772..3899158 | - | 387 | WP_001300035.1 | phage minor tail protein G | - |
| JSU13_RS18620 (3899219) | 3899219..3899962 | - | 744 | WP_000211109.1 | phage tail protein | - |
| JSU13_RS18625 (3899974) | 3899974..3900375 | - | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| JSU13_RS18630 (3900372) | 3900372..3900950 | - | 579 | WP_000677106.1 | phage tail protein | - |
| JSU13_RS18635 (3900962) | 3900962..3901237 | - | 276 | WP_001283144.1 | DNA breaking-rejoining protein | - |
| JSU13_RS18640 (3901230) | 3901230..3901553 | - | 324 | WP_032171307.1 | DUF2190 family protein | - |
| JSU13_RS18645 (3901640) | 3901640..3903667 | - | 2028 | WP_001136590.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| JSU13_RS18650 (3903612) | 3903612..3905120 | - | 1509 | WP_000985945.1 | phage portal protein | - |
| JSU13_RS18655 (3905120) | 3905120..3905332 | - | 213 | WP_001072975.1 | hypothetical protein | - |
| JSU13_RS18660 (3905329) | 3905329..3907431 | - | 2103 | WP_000934119.1 | phage terminase large subunit family protein | - |
| JSU13_RS18665 (3907431) | 3907431..3907922 | - | 492 | WP_000349509.1 | DUF1441 family protein | - |
| JSU13_RS18670 (3908280) | 3908280..3908456 | + | 177 | WP_001205130.1 | hypothetical protein | - |
| JSU13_RS18675 (3908598) | 3908598..3908750 | - | 153 | WP_001139674.1 | hypothetical protein | - |
| JSU13_RS18680 (3908738) | 3908738..3909205 | - | 468 | WP_001341210.1 | lysis system i-spanin subunit Rz | - |
| JSU13_RS18685 (3909202) | 3909202..3909699 | - | 498 | WP_001135250.1 | lysozyme RrrD | - |
| JSU13_RS18690 (3909699) | 3909699..3909914 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| JSU13_RS18695 (3909982) | 3909982..3911034 | - | 1053 | WP_000799656.1 | site-specific DNA-methyltransferase | - |
| JSU13_RS18700 (3911185) | 3911185..3911388 | - | 204 | WP_000917724.1 | hypothetical protein | - |
| JSU13_RS18705 (3911642) | 3911642..3912394 | - | 753 | WP_001047110.1 | antitermination protein | - |
| JSU13_RS18710 (3912408) | 3912408..3913397 | - | 990 | WP_015674832.1 | DUF968 domain-containing protein | - |
| JSU13_RS18715 (3913405) | 3913405..3914214 | - | 810 | WP_001061380.1 | KilA-N domain-containing protein | - |
| JSU13_RS18720 (3914234) | 3914234..3914623 | - | 390 | WP_000767103.1 | RusA family crossover junction endodeoxyribonuclease | - |
| JSU13_RS18725 (3914620) | 3914620..3914946 | - | 327 | WP_000210170.1 | LexA family transcriptional regulator | - |
| JSU13_RS18730 (3914943) | 3914943..3915596 | - | 654 | WP_001442792.1 | phage N-6-adenine-methyltransferase | - |
| JSU13_RS18735 (3915596) | 3915596..3916090 | - | 495 | WP_015674830.1 | PerC family transcriptional regulator | - |
| JSU13_RS18740 (3916087) | 3916087..3916905 | - | 819 | WP_000061529.1 | helix-turn-helix domain-containing protein | - |
| JSU13_RS18745 (3916902) | 3916902..3917138 | - | 237 | WP_001610359.1 | hypothetical protein | - |
| JSU13_RS18750 (3917131) | 3917131..3917709 | - | 579 | WP_223699807.1 | ash family protein | - |
| JSU13_RS24290 (3917639) | 3917639..3917818 | - | 180 | WP_001341559.1 | DUF4222 domain-containing protein | - |
| JSU13_RS18755 (3917964) | 3917964..3918515 | - | 552 | WP_000515860.1 | protein YmfL | - |
| JSU13_RS18760 (3918559) | 3918559..3918759 | - | 201 | WP_000649477.1 | YdaS family helix-turn-helix protein | - |
| JSU13_RS18765 (3918850) | 3918850..3919524 | + | 675 | WP_000859461.1 | LexA family transcriptional regulator | - |
| JSU13_RS18770 (3920211) | 3920211..3920573 | + | 363 | WP_000135680.1 | protein YfdP | - |
| JSU13_RS18775 (3920639) | 3920639..3921463 | + | 825 | WP_000081278.1 | YfdQ family protein | - |
| JSU13_RS18780 (3921591) | 3921591..3922127 | + | 537 | WP_001371719.1 | 5'-deoxynucleotidase | - |
| JSU13_RS18785 (3922118) | 3922118..3922996 | + | 879 | WP_000335009.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| JSU13_RS18790 (3922993) | 3922993..3923340 | + | 348 | WP_000206055.1 | hypothetical protein | - |
| JSU13_RS18795 (3923817) | 3923817..3925058 | - | 1242 | WP_052993680.1 | hypothetical protein | - |
| JSU13_RS18800 (3925243) | 3925243..3926466 | - | 1224 | WP_001218286.1 | 2-hydroxyhexa-2,4-dienoate hydratase ; Integrase | Integrase |
| JSU13_RS18805 (3926852) | 3926852..3927529 | - | 678 | WP_000870712.1 | pyrimidine 5'-nucleotidase | - |
| JSU13_RS18810 (3927544) | 3927544..3927990 | - | 447 | WP_001092450.1 | Mycothiol acetyltransferase | VF |
| JSU13_RS18815 (3927959) | 3927959..3928372 | - | 414 | WP_000204018.1 | DNA polymerase III subunit psi | - |
| JSU13_RS18820 (3928475) | 3928475..3929506 | + | 1032 | WP_001272262.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| JSU13_RS18840 (3930167) | 3930167..3930403 | - | 237 | WP_001362956.1 | DUF1435 domain-containing protein | - |
| JSU13_RS18845 (3930544) | 3930544..3931332 | + | 789 | WP_000331551.1 | siderophore-iron reductase FhuF | - |
| JSU13_RS18850 (3931370) | 3931370..3932047 | - | 678 | WP_001300509.1 | Acyl-CoA dehydrogenase FadE29 | VF |
| JSU13_RS18855 (3932005) | 3932005..3932730 | - | 726 | WP_000936635.1 | Steroid C26-monooxygenase | VF |
| JSU13_RS18860 (3933349) | 3933349..3934119 | + | 771 | WP_001295409.1 | threonine/serine exporter ThrE family protein | - |
| JSU13_RS18865 (3934110) | 3934110..3934583 | + | 474 | WP_000538182.1 | threonine/serine exporter | - |
| JSU13_RS18870 (3934691) | 3934691..3935230 | + | 540 | WP_000098818.1 | primosomal protein DnaT | - |
| JSU13_RS18875 (3935233) | 3935233..3935970 | + | 738 | WP_000799911.1 | IS21 family transposase ISSme2 | Transposase |
| JSU13_RS18880 (3936019) | 3936019..3936513 | + | 495 | WP_001308243.1 | DUF2501 domain-containing protein YjjA | - |
| JSU13_RS18885 (3936767) | 3936767..3939058 | + | 2292 | WP_001292655.1 | phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | - |
| JSU13_RS18890 (3939197) | 3939197..3940219 | - | 1023 | WP_000106030.1 | L-galactonate oxidoreductase | - |
| JSU13_RS18895 (3940370) | 3940370..3941067 | + | 698 | WP_224434044.1 | IS1 family transposase IS1R | Transposase |
| JSU13_RS18900 (3941134) | 3941134..3942048 | + | 915 | WP_000091570.1 | GntR family transcriptional regulator | - |
| JSU13_RS18905 (3942263) | 3942263..3943624 | + | 1362 | WP_000410120.1 | MFS transporter | - |
| JSU13_RS18910 (3943673) | 3943673..3945328 | - | 1656 | WP_000919541.1 | HTH-type transcriptional repressor KstR2 | VF |
| JSU13_RS18915 (3945705) | 3945705..3947855 | + | 2151 | WP_001295524.1 | pyruvate/proton symporter BtsT | - |
| JSU13_RS18920 (3947905) | 3947905..3948108 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| JSU13_RS18925 (3948119) | 3948119..3949075 | + | 957 | WP_001297640.1 | GTPase | - |
| JSU13_RS18930 (3949109) | 3949109..3949411 | - | 303 | WP_000063156.1 | BrnA antitoxin family protein | Antitoxin Detail |
| JSU13_RS18935 (3949398) | 3949398..3949685 | - | 288 | WP_001297643.1 | BrnT family toxin | Toxin Detail |
| JSU13_RS18940 (3949884) | 3949884..3950581 | - | 698 | Protein_3749 | IS1 family transposase | - |
| JSU13_RS18945 (3950638) | 3950638..3950733 | + | 96 | Protein_3750 | dienelactone hydrolase family protein | - |
| JSU13_RS18950 (3950879) | 3950879..3952113 | + | 1235 | Protein_3751 | multidrug efflux MFS transporter MdtM | - |
| JSU13_RS18955 (3952154) | 3952154..3953434 | + | 1281 | WP_001037380.1 | DUF445 domain-containing protein | - |
| JSU13_RS18960 (3953550) | 3953550..3954701 | + | 1152 | WP_001300012.1 | double-cubane-cluster-containing anaerobic reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|