MGE detailed information
MGE type: Prophage MGE length: 69185 bp
Accession: NZ_CP069657 Location: 4097602..4166786 Organism: Escherichia coli O89m:H10 strain MIN12 Replicon: chromosome
Accession: NZ_CP069657 Location: 4097602..4166786 Organism: Escherichia coli O89m:H10 strain MIN12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JSU14_RS19560 (4092721) | 4092721..4093794 | - | 1074 | WP_001299187.1 | patatin family protein | - |
| JSU14_RS19565 (4093916) | 4093916..4094077 | - | 162 | WP_000490275.1 | DUF1328 domain-containing protein | - |
| JSU14_RS19570 (4094204) | 4094204..4094809 | - | 606 | WP_001295410.1 | molecular chaperone OsmY | - |
| JSU14_RS19575 (4095202) | 4095202..4096788 | - | 1587 | WP_000202564.1 | peptide chain release factor 3 | - |
| JSU14_RS19580 (4097008) | 4097008..4097268 | + | 261 | WP_001217545.1 | DinI-like family protein | - |
| JSU14_RS19585 (4097602) | 4097602..4099230 | + | 1629 | WP_225090648.1 | Lipopolysaccharide core heptose(II) kinase RfaY | VF |
| JSU14_RS19590 (4099368) | 4099368..4099688 | - | 321 | Protein_3880 | recombinase family protein | - |
| JSU14_RS19595 (4099675) | 4099675..4099818 | - | 144 | Protein_3881 | tail fiber assembly protein | - |
| JSU14_RS25925 (4099833) | 4099833..4103573 | - | 3741 | WP_251361281.1 | prophage tail fiber N-terminal domain-containing protein | - |
| JSU14_RS19605 (4103632) | 4103632..4104231 | - | 600 | WP_001230375.1 | hypothetical protein | VF |
| JSU14_RS19610 (4104301) | 4104301..4107714 | - | 3414 | WP_061363448.1 | host specificity protein J | - |
| JSU14_RS19615 (4107775) | 4107775..4108422 | - | 648 | WP_001399694.1 | tail assembly protein | - |
| JSU14_RS19620 (4108320) | 4108320..4109063 | - | 744 | WP_032147298.1 | C40 family peptidase | - |
| JSU14_RS19625 (4109069) | 4109069..4109767 | - | 699 | WP_001537716.1 | phage minor tail protein L | - |
| JSU14_RS19630 (4109777) | 4109777..4110106 | - | 330 | WP_000447248.1 | phage tail protein | - |
| JSU14_RS19635 (4110106) | 4110106..4113171 | - | 3066 | WP_000371987.1 | phage tail tape measure protein | - |
| JSU14_RS19640 (4113143) | 4113143..4113472 | - | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| JSU14_RS19645 (4113481) | 4113481..4113867 | - | 387 | WP_001300035.1 | phage minor tail protein G | - |
| JSU14_RS19650 (4113928) | 4113928..4114671 | - | 744 | WP_000211109.1 | phage tail protein | - |
| JSU14_RS19655 (4114683) | 4114683..4115084 | - | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| JSU14_RS19660 (4115081) | 4115081..4115659 | - | 579 | WP_000677106.1 | phage tail protein | - |
| JSU14_RS19665 (4115671) | 4115671..4115946 | - | 276 | WP_001283144.1 | DNA breaking-rejoining protein | - |
| JSU14_RS19670 (4115939) | 4115939..4116262 | - | 324 | WP_001097050.1 | DUF2190 family protein | - |
| JSU14_RS19675 (4116349) | 4116349..4118376 | - | 2028 | WP_001136590.1 | Formyl-CoA:oxalate CoA-transferase | VF |
| JSU14_RS19680 (4118321) | 4118321..4119829 | - | 1509 | WP_000985945.1 | phage portal protein | - |
| JSU14_RS19685 (4119829) | 4119829..4120041 | - | 213 | WP_001072975.1 | hypothetical protein | - |
| JSU14_RS19690 (4120038) | 4120038..4120181 | - | 144 | Protein_3900 | phage terminase large subunit family protein | - |
| JSU14_RS19700 (4121440) | 4121440..4123401 | - | 1962 | Protein_3902 | phage terminase large subunit family protein | - |
| JSU14_RS19705 (4123401) | 4123401..4123895 | - | 495 | WP_000373425.1 | DUF1441 family protein | - |
| JSU14_RS19710 (4124571) | 4124571..4124723 | - | 153 | WP_001139675.1 | hypothetical protein | - |
| JSU14_RS19715 (4124711) | 4124711..4125178 | - | 468 | WP_001341210.1 | lysis system i-spanin subunit Rz | - |
| JSU14_RS19720 (4125175) | 4125175..4125672 | - | 498 | Protein_3906 | lysozyme RrrD | - |
| JSU14_RS19725 (4125672) | 4125672..4125887 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| JSU14_RS19730 (4125955) | 4125955..4127007 | - | 1053 | WP_000799656.1 | site-specific DNA-methyltransferase | - |
| JSU14_RS19735 (4127158) | 4127158..4127361 | - | 204 | WP_000917724.1 | hypothetical protein | - |
| JSU14_RS19740 (4127585) | 4127585..4128010 | - | 426 | WP_000217632.1 | hypothetical protein | - |
| JSU14_RS19745 (4128291) | 4128291..4129043 | - | 753 | WP_001047105.1 | antitermination protein | - |
| JSU14_RS19750 (4129057) | 4129057..4130046 | - | 990 | WP_001360050.1 | DUF968 domain-containing protein | - |
| JSU14_RS19755 (4130054) | 4130054..4130863 | - | 810 | WP_001061444.1 | KilA-N domain-containing protein | - |
| JSU14_RS19760 (4130883) | 4130883..4131272 | - | 390 | WP_001398927.1 | RusA family crossover junction endodeoxyribonuclease | - |
| JSU14_RS19765 (4131269) | 4131269..4131595 | - | 327 | WP_000210170.1 | LexA family transcriptional regulator | - |
| JSU14_RS19770 (4131595) | 4131595..4132089 | - | 495 | WP_001373594.1 | PerC family transcriptional regulator | - |
| JSU14_RS19775 (4132086) | 4132086..4132904 | - | 819 | WP_029397012.1 | helix-turn-helix domain-containing protein | - |
| JSU14_RS19780 (4132901) | 4132901..4133137 | - | 237 | WP_000933942.1 | hypothetical protein | - |
| JSU14_RS19785 (4133130) | 4133130..4133708 | - | 579 | WP_050553208.1 | ash family protein | - |
| JSU14_RS25930 (4133638) | 4133638..4133817 | - | 180 | WP_001341559.1 | DUF4222 domain-containing protein | - |
| JSU14_RS19790 (4133963) | 4133963..4134514 | - | 552 | WP_000521508.1 | protein YmfL | - |
| JSU14_RS19795 (4134558) | 4134558..4134758 | - | 201 | WP_000649477.1 | YdaS family helix-turn-helix protein | - |
| JSU14_RS19800 (4134849) | 4134849..4135523 | + | 675 | WP_000848748.1 | LexA family transcriptional repressor | - |
| JSU14_RS19805 (4136190) | 4136190..4136552 | + | 363 | WP_000135682.1 | protein YfdP | - |
| JSU14_RS19810 (4136618) | 4136618..4137442 | + | 825 | WP_000081287.1 | DUF2303 family protein | - |
| JSU14_RS19815 (4137571) | 4137571..4138107 | + | 537 | WP_000008220.1 | 5'-deoxynucleotidase | - |
| JSU14_RS19820 (4138098) | 4138098..4138460 | + | 363 | WP_001242701.1 | hypothetical protein | - |
| JSU14_RS25935 (4138841) | 4138841..4139080 | + | 240 | Protein_3928 | DUF551 domain-containing protein | - |
| JSU14_RS19830 (4139382) | 4139382..4141514 | - | 2133 | WP_208284753.1 | CHAT domain protein | - |
| JSU14_RS19835 (4141648) | 4141648..4142865 | - | 1218 | WP_029397014.1 | hypothetical protein ; Integrase | Integrase |
| JSU14_RS19840 (4143251) | 4143251..4143928 | - | 678 | WP_000870712.1 | pyrimidine 5'-nucleotidase | - |
| JSU14_RS19845 (4143943) | 4143943..4144389 | - | 447 | WP_001092450.1 | Mycothiol acetyltransferase | VF |
| JSU14_RS19850 (4144358) | 4144358..4144771 | - | 414 | WP_000204018.1 | DNA polymerase III subunit psi | - |
| JSU14_RS19855 (4144874) | 4144874..4145905 | + | 1032 | WP_001272262.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| JSU14_RS19875 (4146566) | 4146566..4146802 | - | 237 | WP_001362956.1 | DUF1435 domain-containing protein | - |
| JSU14_RS19880 (4146943) | 4146943..4147731 | + | 789 | WP_000331551.1 | siderophore-iron reductase FhuF | - |
| JSU14_RS19885 (4147769) | 4147769..4148446 | - | 678 | WP_001300509.1 | Transcriptional regulatory protein RcsB | VF |
| JSU14_RS19890 (4148404) | 4148404..4149129 | - | 726 | WP_000936635.1 | Transcriptional regulatory protein RcsB | VF |
| JSU14_RS19895 (4149748) | 4149748..4150518 | + | 771 | WP_001295409.1 | threonine/serine exporter ThrE family protein | - |
| JSU14_RS19900 (4150509) | 4150509..4150982 | + | 474 | WP_000538182.1 | threonine/serine exporter | - |
| JSU14_RS19905 (4151090) | 4151090..4151629 | + | 540 | WP_000098818.1 | primosomal protein DnaT | - |
| JSU14_RS19910 (4151632) | 4151632..4152369 | + | 738 | WP_000799911.1 | IS21 family transposase ISSme2 | Transposase |
| JSU14_RS19915 (4152418) | 4152418..4152912 | + | 495 | WP_001308243.1 | DUF2501 domain-containing protein YjjA | - |
| JSU14_RS19920 (4153166) | 4153166..4155457 | + | 2292 | WP_001292655.1 | phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | - |
| JSU14_RS19925 (4155596) | 4155596..4156618 | - | 1023 | WP_000106030.1 | L-galactonate oxidoreductase | - |
| JSU14_RS19930 (4156769) | 4156769..4157466 | + | 698 | WP_224434044.1 | IS1 family transposase IS1R | Transposase |
| JSU14_RS19935 (4157533) | 4157533..4158447 | + | 915 | WP_000091570.1 | GntR family transcriptional regulator | - |
| JSU14_RS19940 (4158662) | 4158662..4160023 | + | 1362 | WP_000410120.1 | MFS transporter | - |
| JSU14_RS19945 (4160072) | 4160072..4161727 | - | 1656 | WP_000919541.1 | hypothetical protein | VF |
| JSU14_RS19950 (4162104) | 4162104..4164254 | + | 2151 | WP_001446922.1 | pyruvate/proton symporter BtsT | - |
| JSU14_RS19955 (4164304) | 4164304..4164507 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| JSU14_RS19960 (4164518) | 4164518..4165474 | + | 957 | WP_001297640.1 | GTPase | - |
| JSU14_RS19965 (4165508) | 4165508..4165810 | - | 303 | WP_000063156.1 | BrnA antitoxin family protein | Antitoxin Detail |
| JSU14_RS19970 (4165797) | 4165797..4166084 | - | 288 | WP_001297643.1 | BrnT family toxin | Toxin Detail |
| JSU14_RS19975 (4166283) | 4166283..4166980 | - | 698 | Protein_3955 | IS1 family transposase | - |
| JSU14_RS19980 (4167037) | 4167037..4167132 | + | 96 | Protein_3956 | dienelactone hydrolase family protein | - |
| JSU14_RS19985 (4167278) | 4167278..4168510 | + | 1233 | WP_001380906.1 | multidrug efflux MFS transporter MdtM | - |
| JSU14_RS19990 (4168551) | 4168551..4169831 | + | 1281 | WP_001037380.1 | DUF445 domain-containing protein | - |
| JSU14_RS19995 (4169947) | 4169947..4171098 | + | 1152 | WP_001300012.1 | double-cubane-cluster-containing anaerobic reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|