MGE detailed information
MGE type: Genomic_island MGE length: 16943 bp
Accession: NZ_CP069639 Location: 89668..106610 Organism: Escherichia coli strain SSGNw1 Replicon: chromosome
Accession: NZ_CP069639 Location: 89668..106610 Organism: Escherichia coli strain SSGNw1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JSQ92_RS00395 (86483) | 86483..88168 | - | 1686 | WP_001304373.1 | ABC transporter ATP-binding protein/permease | - |
| JSQ92_RS00400 (88368) | 88368..88493 | + | 126 | WP_122083086.1 | hypothetical protein | - |
| JSQ92_RS00405 (88459) | 88459..89616 | - | 1158 | WP_001304372.1 | anaerobic sulfatase maturase | - |
| JSQ92_RS00410 (89668) | 89668..91350 | - | 1683 | WP_001296072.1 | sulfatase | - |
| JSQ92_RS00415 (91752) | 91752..92513 | - | 762 | WP_000060504.1 | acid stress response transcriptional regulator YdeO | - |
| JSQ92_RS00420 (92589) | 92589..92786 | - | 198 | WP_000543389.1 | two-component system connector SafA | - |
| JSQ92_RS00425 (93034) | 93034..95313 | - | 2280 | WP_000726723.1 | acid resistance putative oxidoreductase YdeP | - |
| JSQ92_RS00430 (95652) | 95652..96566 | - | 915 | WP_000520591.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| JSQ92_RS00435 (96626) | 96626..97129 | - | 504 | WP_000825467.1 | Protein FimG | VF |
| JSQ92_RS00440 (97142) | 97142..97672 | - | 531 | WP_000876767.1 | Protein FimF | VF |
| JSQ92_RS00445 (97686) | 97686..100337 | - | 2652 | WP_000123643.1 | Outer membrane usher protein FimD | VF |
| JSQ92_RS00450 (100379) | 100379..101089 | - | 711 | WP_001195181.1 | Chaperone protein FocC | VF |
| JSQ92_RS00455 (101451) | 101451..102014 | - | 564 | WP_001327671.1 | Type-1 fimbrial protein, A chain | VF |
| JSQ92_RS00460 (102439) | 102439..102546 | + | 108 | Protein_91 | hypothetical protein | - |
| JSQ92_RS00465 (102790) | 102790..103572 | - | 783 | WP_001221834.1 | SDR family oxidoreductase | - |
| JSQ92_RS00470 (103721) | 103721..104302 | + | 582 | Protein_93 | HTH-type transcriptional regulator PgrR | VF |
| JSQ92_RS00475 (104305) | 104305..104712 | + | 408 | Protein_94 | HTH-type transcriptional regulator PgrR | VF |
| JSQ92_RS00480 (105022) | 105022..106344 | - | 1323 | WP_001125431.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| JSQ92_RS00485 (106344) | 106344..106610 | - | 267 | WP_001304368.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| JSQ92_RS00490 (106918) | 106918..107676 | + | 759 | WP_001286540.1 | trans-aconitate 2-methyltransferase | - |
| JSQ92_RS00495 (107680) | 107680..108594 | - | 915 | WP_001443133.1 | bestrophin family protein | - |
| JSQ92_RS00500 (108791) | 108791..110242 | - | 1452 | WP_000854660.1 | tagaturonate reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli Nissle 1917 | Genomic island | TA10098 | NZ_CP007799 | 1694571..1711514 | 0 |