MGE detailed information
MGE type: Prophage MGE length: 18607 bp
Accession: NZ_CP069599 Location: 461494..480100 Organism: Dickeya dianthicola strain 16MB01 Replicon: chromosome
Accession: NZ_CP069599 Location: 461494..480100 Organism: Dickeya dianthicola strain 16MB01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JRZ87_RS02065 (JRZ87_02055) | 457269..458339 | + | 1071 | WP_024104347.1 | LPS export ABC transporter permease LptG | - |
| JRZ87_RS02075 (JRZ87_02065) | 458865..460133 | + | 1269 | WP_024104348.1 | tyrosine-type recombinase/integrase | - |
| JRZ87_RS02080 (JRZ87_02070) | 460233..461450 | + | 1218 | WP_024104349.1 | dNTP triphosphohydrolase | - |
| JRZ87_RS02085 (JRZ87_02075) | 461494..463122 | + | 1629 | WP_024104350.1 | TIGR04141 family sporadically distributed protein | - |
| JRZ87_RS02090 (JRZ87_02080) | 463254..463469 | - | 216 | WP_046830366.1 | helix-turn-helix transcriptional regulator | - |
| JRZ87_RS02095 (JRZ87_02085) | 463565..463831 | + | 267 | WP_015848023.1 | helix-turn-helix transcriptional regulator | - |
| JRZ87_RS22215 | 464054..465133 | - | 1080 | WP_232483843.1 | helicase RepA family protein | - |
| JRZ87_RS22220 | 465257..466099 | - | 843 | Protein_404 | primase-helicase zinc-binding domain-containing protein | - |
| JRZ87_RS22225 | 466092..466268 | - | 177 | WP_228671284.1 | hypothetical protein | - |
| JRZ87_RS22230 | 466350..466628 | - | 279 | Protein_406 | ash family protein | - |
| JRZ87_RS02110 (JRZ87_02100) | 466625..466825 | - | 201 | WP_198298638.1 | AlpA family transcriptional regulator | - |
| JRZ87_RS02115 (JRZ87_02105) | 466828..467709 | - | 882 | WP_103415799.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| JRZ87_RS02120 (JRZ87_02110) | 468751..469102 | + | 352 | Protein_409 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JRZ87_RS02125 (JRZ87_02115) | 469086..469409 | + | 324 | WP_024104357.1 | DNA-binding transcriptional regulator | - |
| JRZ87_RS02130 (JRZ87_02120) | 469696..471423 | - | 1728 | WP_103415798.1 | retron Ec67 family RNA-directed DNA polymerase/endonuclease | - |
| JRZ87_RS02135 (JRZ87_02125) | 472544..472864 | + | 321 | WP_024104360.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JRZ87_RS02140 (JRZ87_02130) | 472854..473138 | + | 285 | WP_024104361.1 | helix-turn-helix transcriptional regulator | - |
| JRZ87_RS22235 | 473145..473291 | + | 147 | Protein_414 | transcriptional regulator | - |
| JRZ87_RS02145 (JRZ87_02135) | 473436..473837 | - | 402 | WP_024104362.1 | hypothetical protein | - |
| JRZ87_RS02150 (JRZ87_02140) | 473866..474345 | - | 480 | WP_013316117.1 | GNAT family N-acetyltransferase | Toxin Detail |
| JRZ87_RS02155 (JRZ87_02145) | 474336..474608 | - | 273 | WP_024104363.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| JRZ87_RS02160 (JRZ87_02150) | 475098..475521 | + | 424 | Protein_418 | Arm DNA-binding domain-containing protein | - |
| JRZ87_RS02170 (JRZ87_02160) | 476444..476650 | - | 207 | Protein_420 | DUF1778 domain-containing protein | - |
| JRZ87_RS22240 | 476721..476789 | + | 69 | Protein_421 | integrase | - |
| JRZ87_RS22245 | 476814..476906 | + | 93 | Protein_422 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| JRZ87_RS02175 (JRZ87_02165) | 476948..478336 | + | 1389 | WP_024104366.1 | hypothetical protein | - |
| JRZ87_RS02180 (JRZ87_02170) | 478486..478824 | - | 339 | WP_024104367.1 | hypothetical protein | - |
| JRZ87_RS02185 (JRZ87_02175) | 479297..480100 | + | 804 | WP_024108133.1 | hypothetical protein | - |
| JRZ87_RS02190 (JRZ87_02180) | 480190..480816 | - | 627 | WP_024104369.1 | LysE/ArgO family amino acid transporter | - |
| JRZ87_RS02195 (JRZ87_02185) | 481013..481495 | - | 483 | WP_024104370.1 | DNA mismatch endonuclease Vsr | - |
| JRZ87_RS02200 (JRZ87_02190) | 481502..482932 | - | 1431 | WP_024104371.1 | DNA cytosine methyltransferase | - |
| JRZ87_RS02205 (JRZ87_02195) | 483172..484485 | + | 1314 | WP_024108134.1 | MvaI/BcnI family restriction endonuclease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|