MGE detailed information
MGE type: Genomic_island MGE length: 25202 bp
Accession: NZ_CP069599 Location: 1852592..1877793 Organism: Dickeya dianthicola strain 16MB01 Replicon: chromosome
Accession: NZ_CP069599 Location: 1852592..1877793 Organism: Dickeya dianthicola strain 16MB01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JRZ87_RS08495 (JRZ87_08490) | 1848272..1849798 | + | 1527 | WP_024105479.1 | DHA2 family efflux MFS transporter permease subunit | - |
| JRZ87_RS08500 (JRZ87_08495) | 1849974..1850789 | + | 816 | WP_232483795.1 | helix-turn-helix domain-containing protein | - |
| JRZ87_RS08505 (JRZ87_08500) | 1850994..1851479 | + | 486 | WP_024105481.1 | DUF2501 domain-containing protein | - |
| JRZ87_RS08510 (JRZ87_08505) | 1851621..1852211 | - | 591 | WP_024108562.1 | flavin reductase family protein | - |
| JRZ87_RS08515 (JRZ87_08510) | 1852592..1852924 | + | 333 | WP_024105483.1 | DUF1971 domain-containing protein | - |
| JRZ87_RS08520 (JRZ87_08515) | 1852935..1853273 | + | 339 | WP_024105484.1 | DUF1869 domain-containing protein | - |
| JRZ87_RS08525 (JRZ87_08520) | 1853401..1854390 | + | 990 | Protein_1672 | IS3 family transposase | - |
| JRZ87_RS08530 (JRZ87_08525) | 1854482..1855357 | + | 876 | WP_024108563.1 | DUF2971 domain-containing protein | - |
| JRZ87_RS08535 (JRZ87_08530) | 1855544..1856437 | - | 894 | WP_024108564.1 | MBL fold metallo-hydrolase | - |
| JRZ87_RS08540 (JRZ87_08535) | 1856997..1857617 | - | 621 | WP_024108565.1 | flavin reductase family protein | - |
| JRZ87_RS08545 (JRZ87_08540) | 1857843..1858256 | - | 414 | WP_024108566.1 | tautomerase family protein | - |
| JRZ87_RS08550 (JRZ87_08545) | 1858321..1858731 | - | 411 | WP_024108567.1 | hypothetical protein | - |
| JRZ87_RS08555 (JRZ87_08550) | 1858813..1859706 | - | 894 | WP_024108568.1 | Acetyl esterase | VF |
| JRZ87_RS08560 (JRZ87_08555) | 1859715..1860698 | - | 984 | WP_024108569.1 | MBL fold metallo-hydrolase | - |
| JRZ87_RS08565 (JRZ87_08560) | 1860964..1861449 | + | 486 | WP_024108570.1 | helix-turn-helix domain-containing protein | - |
| JRZ87_RS08570 (JRZ87_08565) | 1861545..1861679 | + | 135 | Protein_1681 | winged helix-turn-helix transcriptional regulator | - |
| JRZ87_RS08575 (JRZ87_08570) | 1861701..1862432 | + | 732 | Protein_1682 | zincin-like metallopeptidase domain-containing protein | - |
| JRZ87_RS08580 (JRZ87_08575) | 1862759..1862995 | + | 237 | WP_024108345.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| JRZ87_RS08585 (JRZ87_08580) | 1862998..1863312 | + | 315 | WP_024108344.1 | CcdB family protein | Toxin Detail |
| JRZ87_RS08590 (JRZ87_08585) | 1863955..1864473 | + | 519 | WP_024108343.1 | Oligopeptide transport ATP-binding protein OppD | VF |
| JRZ87_RS08595 (JRZ87_08590) | 1864586..1866442 | + | 1857 | WP_024108342.1 | Oligopeptide transport system permease protein OppC | VF |
| JRZ87_RS22295 | 1866468..1866752 | + | 285 | Protein_1687 | type VI secretion system PAAR protein | - |
| JRZ87_RS08605 (JRZ87_08600) | 1866992..1867867 | + | 876 | WP_024108340.1 | DUF6402 family protein | - |
| JRZ87_RS08610 (JRZ87_08605) | 1867864..1868295 | + | 432 | WP_071599229.1 | DUF6201 family protein | - |
| JRZ87_RS08615 (JRZ87_08610) | 1868389..1868433 | + | 45 | Protein_1690 | hypothetical protein | - |
| JRZ87_RS22300 | 1868482..1868691 | + | 210 | WP_234003768.1 | hypothetical protein | - |
| JRZ87_RS22310 | 1868905..1869048 | + | 144 | WP_234003767.1 | RHS repeat domain-containing protein | - |
| JRZ87_RS08625 (JRZ87_08620) | 1869104..1869322 | + | 219 | WP_024108337.1 | hypothetical protein | - |
| JRZ87_RS22315 | 1869464..1869669 | + | 206 | Protein_1694 | hypothetical protein | - |
| JRZ87_RS08630 (JRZ87_08625) | 1869731..1870657 | - | 927 | WP_024108336.1 | hypothetical protein | - |
| JRZ87_RS08635 (JRZ87_08630) | 1871357..1871653 | + | 297 | WP_103415962.1 | DUF736 domain-containing protein | - |
| JRZ87_RS08640 (JRZ87_08635) | 1871766..1873049 | - | 1284 | WP_024108655.1 | HTH-type transcriptional regulator CdhR ; Integrase | Integrase |
| JRZ87_RS08650 (JRZ87_08645) | 1873396..1874187 | - | 792 | WP_024105495.1 | DgsA anti-repressor MtfA | - |
| JRZ87_RS08660 (JRZ87_08655) | 1874790..1875137 | + | 348 | WP_024105496.1 | DUF3168 domain-containing protein | - |
| JRZ87_RS08665 (JRZ87_08660) | 1875231..1877468 | + | 2238 | WP_024108656.1 | discoidin domain-containing protein | - |
| JRZ87_RS08670 (JRZ87_08665) | 1877626..1877793 | + | 168 | WP_024105498.1 | YqaE/Pmp3 family membrane protein | - |
| JRZ87_RS08675 (JRZ87_08670) | 1877864..1878418 | - | 555 | WP_024105499.1 | flavodoxin family protein | - |
| JRZ87_RS08680 (JRZ87_08675) | 1878700..1879752 | - | 1053 | WP_024105500.1 | glycosyltransferase | - |
| JRZ87_RS08685 (JRZ87_08680) | 1879868..1880263 | - | 396 | WP_024105501.1 | acyl-CoA thioesterase | - |
| JRZ87_RS08690 (JRZ87_08685) | 1880353..1881111 | - | 759 | WP_024105502.1 | molybdopterin-synthase adenylyltransferase MoeB | - |
| JRZ87_RS08695 (JRZ87_08690) | 1881111..1882346 | - | 1236 | WP_024105503.1 | molybdopterin molybdotransferase MoeA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|