MGE detailed information
MGE type: Prophage MGE length: 32208 bp
Accession: NZ_CP069542 Location: 2797819..2830026 Organism: Escherichia coli strain FDAARGOS_1248 Replicon: chromosome
Accession: NZ_CP069542 Location: 2797819..2830026 Organism: Escherichia coli strain FDAARGOS_1248 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J78_RS13205 () | 2793070..2793780 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| I6J78_RS13210 () | 2793783..2794343 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| I6J78_RS13215 () | 2794378..2794719 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| I6J78_RS13220 () | 2794854..2795180 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| I6J78_RS13225 () | 2795386..2796600 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| I6J78_RS13230 () | 2796612..2797631 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| I6J78_RS13235 () | 2797689..2797799 | + | 111 | WP_001360138.1 | hypothetical protein | - |
| I6J78_RS13240 () | 2797819..2799099 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| I6J78_RS13245 () | 2799134..2799385 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| I6J78_RS13250 () | 2799458..2801065 | - | 1608 | Protein_2572 | 3'-5' exoribonuclease | - |
| I6J78_RS13255 () | 2801128..2801388 | + | 261 | Protein_2573 | IS3 family transposase ISSfl10 | Transposase |
| I6J78_RS13260 () | 2801453..2802604 | + | 1152 | WP_001254876.1 | IS30 family transposase IS30D | Transposase |
| I6J78_RS13265 () | 2802611..2803507 | + | 897 | Protein_2575 | IS3 family transposase ISSd1 | Transposase |
| I6J78_RS13270 () | 2803550..2803930 | - | 381 | Protein_2576 | hypothetical protein | - |
| I6J78_RS13275 () | 2803920..2804171 | + | 252 | Protein_2577 | DUF977 family protein | - |
| I6J78_RS13280 () | 2804168..2804524 | + | 357 | WP_204148116.1 | class I SAM-dependent methyltransferase | - |
| I6J78_RS13285 () | 2805135..2805422 | + | 288 | Protein_2579 | hypothetical protein | - |
| I6J78_RS13290 () | 2806191..2807504 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| I6J78_RS13295 () | 2807941..2808273 | - | 333 | WP_001301033.1 | protein FlxA | - |
| I6J78_RS13300 () | 2808476..2808781 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| I6J78_RS13305 () | 2808806..2809045 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| I6J78_RS13310 () | 2809045..2809332 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| I6J78_RS13315 () | 2809404..2809559 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| I6J78_RS13320 () | 2809776..2810027 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| I6J78_RS13325 () | 2810094..2810372 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| I6J78_RS13330 () | 2810374..2811423 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| I6J78_RS13335 () | 2811437..2812189 | + | 753 | WP_001047135.1 | antitermination protein | - |
| I6J78_RS13340 () | 2812496..2812654 | - | 159 | Protein_2590 | cold shock-like protein CspF | - |
| I6J78_RS13345 () | 2812955..2813170 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| I6J78_RS13350 () | 2813924..2814139 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| I6J78_RS13355 () | 2814144..2814455 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| I6J78_RS13360 () | 2814452..2814985 | + | 534 | WP_001092971.1 | lysozyme | - |
| I6J78_RS13365 () | 2814982..2815479 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| I6J78_RS13370 () | 2815842..2816054 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| I6J78_RS13375 () | 2816065..2816253 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| I6J78_RS13380 () | 2816256..2816321 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| I6J78_RS13385 () | 2816401..2816556 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| I6J78_RS13390 () | 2816728..2816901 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| I6J78_RS13395 () | 2817053..2817463 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| I6J78_RS13400 () | 2817521..2817754 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| I6J78_RS13405 () | 2818143..2818688 | + | 546 | WP_000453589.1 | DNA-packaging protein | - |
| I6J78_RS13410 () | 2818646..2818972 | + | 327 | Protein_2604 | phage tail protein | - |
| I6J78_RS13415 () | 2818939..2819247 | + | 309 | WP_071524888.1 | phage tail protein | - |
| I6J78_RS13420 () | 2819247..2819822 | + | 576 | WP_000885600.1 | tail fiber assembly protein | - |
| I6J78_RS13425 () | 2819920..2820510 | - | 591 | WP_158138255.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| I6J78_RS13430 () | 2820827..2821060 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| I6J78_RS13435 () | 2821129..2821242 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| I6J78_RS13440 () | 2821846..2823129 | + | 1284 | Protein_2610 | MHS family MFS transporter YdfJ | - |
| I6J78_RS13445 () | 2823218..2824678 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| I6J78_RS13450 () | 2824713..2824916 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| I6J78_RS13455 () | 2825093..2825779 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| I6J78_RS13460 () | 2825868..2826614 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| I6J78_RS13465 () | 2826751..2828796 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| I6J78_RS13470 () | 2828840..2829358 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| I6J78_RS13475 () | 2829634..2830026 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| I6J78_RS13480 () | 2830281..2831171 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| I6J78_RS13485 () | 2831390..2831485 | - | 96 | WP_000901367.1 | protein MgtS | - |
| I6J78_RS13490 () | 2831612..2832799 | - | 1188 | WP_158138257.1 | efflux MFS transporter YdeE | - |
| I6J78_RS13495 () | 2832994..2833893 | + | 900 | WP_000087187.1 | O-acetylserine/cysteine exporter | - |
| I6J78_RS13500 () | 2833924..2834142 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| I6J78_RS13505 () | 2834174..2834557 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| I6J78_RS13510 () | 2834577..2835011 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|