MGE detailed information
MGE type: Prophage MGE length: 101450 bp
Accession: NZ_CP069528 Location: 2059538..2160987 Organism: Escherichia coli strain FDAARGOS_1252 Replicon: chromosome
Accession: NZ_CP069528 Location: 2059538..2160987 Organism: Escherichia coli strain FDAARGOS_1252 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J82_RS09780 () | 2055394..2056194 | + | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| I6J82_RS09785 () | 2056207..2057058 | + | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| I6J82_RS09790 () | 2057113..2057571 | + | 459 | WP_001538832.1 | DUF986 family protein | - |
| I6J82_RS09795 () | 2058000..2058566 | + | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| I6J82_RS09800 () | 2058563..2059372 | - | 810 | WP_001538833.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| I6J82_RS09805 () | 2059538..2059747 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| I6J82_RS09810 () | 2059760..2059903 | - | 144 | WP_001295496.1 | YobF family protein | - |
| I6J82_RS09815 () | 2060573..2060860 | - | 288 | WP_001006866.1 | YebO family protein | - |
| I6J82_RS09820 () | 2060935..2061078 | - | 144 | WP_000714544.1 | PhoP/PhoQ regulator MgrB | - |
| I6J82_RS09825 () | 2061237..2061476 | + | 240 | WP_001211011.1 | hypothetical protein | - |
| I6J82_RS09830 () | 2061620..2062411 | - | 792 | WP_001262188.1 | DNA-binding transcriptional regulator KdgR | - |
| I6J82_RS09835 () | 2062588..2063961 | + | 1374 | WP_001538834.1 | MFS transporter | - |
| I6J82_RS09840 () | 2063996..2065342 | - | 1347 | WP_000483767.1 | IS4 family transposase IS4 | Transposase |
| I6J82_RS09845 () | 2065446..2066327 | - | 882 | WP_000984517.1 | protease HtpX | - |
| I6J82_RS09850 () | 2066519..2068567 | - | 2049 | WP_001055794.1 | carboxy terminal-processing peptidase | - |
| I6J82_RS09855 () | 2068587..2069285 | - | 699 | WP_000431376.1 | RNA chaperone ProQ | - |
| I6J82_RS09860 () | 2069382..2069879 | - | 498 | WP_001029106.1 | L-methionine (R)-S-oxide reductase | - |
| I6J82_RS09865 () | 2070009..2071292 | + | 1284 | WP_001207279.1 | membrane integrity lipid transport subunit YebS | - |
| I6J82_RS09870 () | 2071261..2073894 | + | 2634 | WP_001298452.1 | hypothetical protein | VF |
| I6J82_RS09875 () | 2073974..2075413 | + | 1440 | WP_024186841.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| I6J82_RS09880 () | 2075532..2075768 | + | 237 | WP_001295499.1 | DUF1480 family protein | - |
| I6J82_RS09885 () | 2075873..2076064 | + | 192 | WP_024186842.1 | YebW family protein | - |
| I6J82_RS09890 () | 2076065..2076721 | - | 657 | WP_000812744.1 | protein-serine/threonine phosphatase | - |
| - () | 2076818..2077086 | + | 269 | - | - | Antitoxin Detail |
| - () | 2076856..2076958 | - | 103 | - | - | Toxin Detail |
| I6J82_RS09895 () | 2077116..2077457 | - | 342 | WP_000984819.1 | YebY family protein | - |
| I6J82_RS09900 () | 2077470..2078342 | - | 873 | WP_000879311.1 | copper homeostasis membrane protein CopD | - |
| I6J82_RS09905 () | 2078346..2078720 | - | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| I6J82_RS09910 () | 2078859..2079089 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| I6J82_RS09915 () | 2079191..2079847 | + | 657 | WP_096972765.1 | carbon-nitrogen hydrolase family protein | - |
| I6J82_RS09920 () | 2079871..2080533 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| I6J82_RS09925 () | 2080530..2082590 | - | 2061 | WP_001538837.1 | oligopeptidase B | - |
| I6J82_RS09930 () | 2082799..2083458 | - | 660 | WP_000024728.1 | tellurite resistance TerB family protein | - |
| I6J82_RS09935 () | 2083785..2084141 | - | 357 | WP_001295500.1 | protein YebF | - |
| I6J82_RS09940 () | 2084208..2084498 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| I6J82_RS09945 () | 2084632..2085810 | + | 1179 | WP_000173466.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| I6J82_RS09950 () | 2085866..2086507 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| I6J82_RS09955 () | 2086544..2088355 | - | 1812 | WP_001538838.1 | phosphogluconate dehydratase | - |
| I6J82_RS09960 () | 2088590..2090065 | - | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| I6J82_RS09965 () | 2090403..2091272 | + | 870 | WP_001056695.1 | DNA-binding transcriptional regulator HexR | - |
| I6J82_RS09970 () | 2091400..2092842 | + | 1443 | WP_000091149.1 | pyruvate kinase | - |
| I6J82_RS09975 () | 2092974..2093945 | - | 972 | WP_001296141.1 | Lipid A biosynthesis myristoyltransferase | VF |
| I6J82_RS09980 () | 2094064..2095386 | - | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| I6J82_RS09985 () | 2095402..2096334 | - | 933 | WP_001347089.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| I6J82_RS09990 () | 2096413..2097168 | + | 756 | WP_000202996.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| I6J82_RS09995 () | 2097165..2097950 | + | 786 | WP_000571479.1 | hypothetical protein | VF |
| I6J82_RS10000 () | 2098095..2099105 | - | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| I6J82_RS10005 () | 2099114..2099725 | - | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| I6J82_RS10010 () | 2099864..2099929 | - | 66 | WP_072093883.1 | stress response small protein YobI | - |
| I6J82_RS10015 () | 2099999..2100601 | + | 603 | WP_001024913.1 | YebB family permuted papain-like enzyme | - |
| I6J82_RS10020 () | 2100603..2101124 | - | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| I6J82_RS10025 () | 2101159..2101899 | - | 741 | WP_000907234.1 | transcriptional regulatory protein YebC | VF |
| I6J82_RS10030 () | 2101928..2102380 | - | 453 | WP_077393227.1 | dihydroneopterin triphosphate diphosphatase | - |
| I6J82_RS10035 () | 2102373..2104145 | - | 1773 | WP_001258675.1 | aspartate--tRNA ligase | - |
| I6J82_RS10040 () | 2104455..2105021 | + | 567 | WP_000891620.1 | hydrolase | - |
| I6J82_RS10045 () | 2105376..2105624 | + | 249 | WP_001217553.1 | DinI-like family protein | - |
| I6J82_RS10050 () | 2105742..2106029 | - | 288 | WP_001513565.1 | hypothetical protein | - |
| I6J82_RS10055 () | 2106039..2106317 | - | 279 | WP_001204581.1 | hypothetical protein | - |
| I6J82_RS10060 () | 2106314..2108377 | - | 2064 | WP_016238843.1 | prophage tail fiber N-terminal domain-containing protein | - |
| I6J82_RS10065 () | 2108529..2109128 | - | 600 | WP_204148101.1 | hypothetical protein | VF |
| I6J82_RS10070 () | 2109196..2112888 | - | 3693 | WP_137056723.1 | DUF1983 domain-containing protein | - |
| I6J82_RS10075 () | 2113232..2113864 | - | 633 | WP_032300536.1 | tail assembly protein | - |
| I6J82_RS10080 () | 2113810..2114553 | - | 744 | WP_021527084.1 | C40 family peptidase | - |
| I6J82_RS10085 () | 2114559..2115257 | - | 699 | WP_001327694.1 | phage minor tail protein L | - |
| I6J82_RS10090 () | 2115257..2115586 | - | 330 | WP_000847298.1 | phage tail protein | - |
| I6J82_RS10095 () | 2115583..2118144 | - | 2562 | WP_001538602.1 | phage tail tape measure protein | - |
| I6J82_RS10100 () | 2118125..2118538 | - | 414 | WP_001538601.1 | phage tail assembly protein T | - |
| I6J82_RS10105 () | 2118565..2118996 | - | 432 | WP_001299690.1 | phage minor tail protein G | - |
| I6J82_RS10110 () | 2119015..2119761 | - | 747 | WP_001538600.1 | phage tail protein | - |
| I6J82_RS10115 () | 2119769..2120164 | - | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| I6J82_RS10120 () | 2120161..2120694 | - | 534 | WP_001538599.1 | phage tail protein | - |
| I6J82_RS10125 () | 2120710..2121063 | - | 354 | WP_001204533.1 | tail attachment protein | - |
| I6J82_RS10130 () | 2121056..2121439 | - | 384 | WP_000201498.1 | hypothetical protein | - |
| I6J82_RS10135 () | 2121491..2122519 | - | 1029 | WP_000522592.1 | major capsid protein | - |
| I6J82_RS10140 () | 2122577..2122924 | - | 348 | WP_000256835.1 | head decoration protein | - |
| I6J82_RS10145 () | 2122961..2124466 | - | 1506 | WP_001538597.1 | S49 family peptidase | - |
| I6J82_RS10150 () | 2124456..2126048 | - | 1593 | WP_001538596.1 | phage portal protein | - |
| I6J82_RS10155 () | 2126045..2126251 | - | 207 | WP_000258993.1 | head-tail joining protein | - |
| I6J82_RS10160 () | 2126235..2128163 | - | 1929 | WP_001538595.1 | phage terminase large subunit family protein | - |
| I6J82_RS10165 () | 2128135..2128683 | - | 549 | WP_001538594.1 | terminase small subunit | - |
| I6J82_RS10170 () | 2129152..2129505 | + | 354 | WP_001322427.1 | hypothetical protein | - |
| I6J82_RS10175 () | 2129628..2129954 | - | 327 | WP_000830178.1 | TonB family protein | - |
| I6J82_RS10180 () | 2130266..2130733 | - | 468 | WP_032142285.1 | lysis protein | - |
| I6J82_RS10185 () | 2130736..2130867 | - | 132 | WP_021546326.1 | hypothetical protein | - |
| I6J82_RS10190 () | 2130882..2131064 | - | 183 | WP_001151823.1 | hypothetical protein | - |
| I6J82_RS10195 () | 2131222..2131755 | - | 534 | WP_021546389.1 | lysozyme | - |
| I6J82_RS10200 () | 2131792..2132682 | - | 891 | WP_001545911.1 | YdfR family protein | - |
| I6J82_RS10205 () | 2132687..2132902 | - | 216 | WP_000284506.1 | class II holin family protein | - |
| I6J82_RS10210 () | 2133052..2133213 | - | 162 | WP_001309421.1 | hypothetical protein | - |
| I6J82_RS10215 () | 2133210..2133413 | - | 204 | WP_072147991.1 | DUF1737 domain-containing protein | - |
| I6J82_RS10220 () | 2133659..2133994 | + | 336 | WP_001323611.1 | anti-adapter protein IraM | - |
| I6J82_RS10225 () | 2134275..2134406 | - | 132 | WP_000562553.1 | DUF3927 family protein | - |
| I6J82_RS10240 () | 2135302..2136123 | - | 822 | WP_001545909.1 | antitermination protein | - |
| I6J82_RS10245 () | 2136138..2136500 | - | 363 | WP_000139998.1 | RusA family crossover junction endodeoxyribonuclease | - |
| I6J82_RS10250 () | 2136501..2137559 | - | 1059 | WP_001545908.1 | DUF968 domain-containing protein | - |
| I6J82_RS10255 () | 2137561..2137833 | - | 273 | WP_023141427.1 | hypothetical protein | - |
| I6J82_RS10260 () | 2138001..2138156 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| I6J82_RS10265 () | 2138765..2139079 | - | 315 | WP_001529162.1 | hypothetical protein | - |
| I6J82_RS10270 () | 2139076..2139252 | - | 177 | WP_000753058.1 | hypothetical protein | - |
| I6J82_RS10275 () | 2139245..2139427 | - | 183 | WP_001224662.1 | hypothetical protein | - |
| I6J82_RS10280 () | 2139521..2139877 | - | 357 | WP_000403785.1 | hypothetical protein | - |
| I6J82_RS10285 () | 2139855..2140478 | - | 624 | WP_001529163.1 | ead/Ea22-like family protein | - |
| I6J82_RS10290 () | 2140465..2140745 | - | 281 | Protein_2014 | DUF4752 family protein | - |
| I6J82_RS10295 () | 2140735..2141037 | - | 303 | WP_001545907.1 | DUF4406 domain-containing protein | - |
| I6J82_RS10300 () | 2141034..2141315 | - | 282 | WP_072146789.1 | DNA-binding protein | - |
| I6J82_RS10305 () | 2141348..2142064 | - | 717 | WP_001529168.1 | DUF1627 domain-containing protein | - |
| I6J82_RS10310 () | 2142086..2142832 | - | 747 | WP_001545904.1 | IS21 family transposase ISAba8 | Transposase |
| I6J82_RS10315 () | 2142839..2143801 | - | 963 | WP_021546386.1 | helix-turn-helix domain-containing protein | - |
| I6J82_RS10320 () | 2143824..2144249 | - | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| I6J82_RS10325 () | 2144246..2144461 | - | 216 | WP_000471549.1 | transcriptional regulator | - |
| I6J82_RS10330 () | 2144511..2145227 | + | 717 | WP_000103685.1 | helix-turn-helix domain-containing protein | - |
| I6J82_RS10335 () | 2145500..2145655 | + | 156 | WP_000379589.1 | DUF1391 family protein | - |
| I6J82_RS10340 () | 2145815..2146033 | + | 219 | WP_001545903.1 | hypothetical protein | - |
| I6J82_RS10345 () | 2146056..2146430 | + | 375 | WP_000394528.1 | hypothetical protein | - |
| I6J82_RS10350 () | 2146971..2147159 | + | 189 | WP_000449175.1 | cell division inhibitor | - |
| I6J82_RS10355 () | 2147156..2147344 | + | 189 | WP_000199475.1 | DUF1482 family protein | - |
| I6J82_RS10360 () | 2147437..2149875 | + | 2439 | WP_000102132.1 | exonuclease | - |
| I6J82_RS10365 () | 2149937..2150206 | + | 270 | WP_096972691.1 | excisionase | - |
| I6J82_RS10370 () | 2150175..2151293 | + | 1119 | WP_000074983.1 | hypothetical protein ; Integrase | Integrase |
| I6J82_RS10375 () | 2151460..2152254 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| I6J82_RS10380 () | 2152251..2153297 | + | 1047 | WP_000759310.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| I6J82_RS10385 () | 2153355..2153816 | + | 462 | WP_001298471.1 | DUF3592 domain-containing protein | - |
| I6J82_RS10390 () | 2153813..2154601 | + | 789 | WP_000723290.1 | TPM domain-containing protein | - |
| I6J82_RS10395 () | 2154739..2155560 | - | 822 | WP_001538573.1 | NAD-dependent protein deacylase | - |
| I6J82_RS10400 () | 2155576..2156487 | - | 912 | WP_000291301.1 | N-acetylglucosamine kinase | - |
| I6J82_RS10405 () | 2156516..2157760 | - | 1245 | WP_001251368.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| I6J82_RS10410 () | 2157760..2158461 | - | 702 | WP_001538569.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| I6J82_RS10415 () | 2158454..2159653 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| I6J82_RS10420 () | 2159914..2160987 | + | 1074 | WP_001538568.1 | acyltransferase family protein | - |
| I6J82_RS10425 () | 2161115..2164561 | + | 3447 | WP_024186828.1 | transcription-repair coupling factor | - |
| I6J82_RS10430 () | 2164704..2165666 | + | 963 | WP_012578883.1 | L,D-transpeptidase LdtC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|