MGE detailed information
MGE type: Prophage MGE length: 64733 bp
Accession: NZ_CP069522 Location: 3861573..3926305 Organism: Escherichia coli strain FDAARGOS_1267 Replicon: chromosome
Accession: NZ_CP069522 Location: 3861573..3926305 Organism: Escherichia coli strain FDAARGOS_1267 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J97_RS18540 () | 3858056..3858766 | + | 711 | WP_001339257.1 | fimbrial chaperone EcpE | - |
| I6J97_RS18545 () | 3859079..3859408 | + | 330 | WP_001350214.1 | YkgJ family cysteine cluster protein | - |
| I6J97_RS18550 () | 3859420..3859583 | - | 164 | Protein_3639 | tail fiber assembly protein | - |
| I6J97_RS18555 () | 3859657..3860271 | - | 615 | WP_001019923.1 | YagU family protein | - |
| I6J97_RS18560 () | 3860486..3860671 | - | 186 | WP_000146243.1 | hypothetical protein | - |
| I6J97_RS18565 () | 3860720..3860878 | + | 159 | Protein_3642 | integrase | - |
| I6J97_RS18570 () | 3861095..3861788 | - | 694 | Protein_3643 | IS1 family transposase | - |
| I6J97_RS18575 () | 3862381..3866511 | + | 4131 | WP_001034006.1 | hypothetical protein | VF |
| I6J97_RS18580 () | 3866667..3867161 | + | 495 | WP_001059463.1 | hypothetical protein | VF |
| I6J97_RS18585 () | 3867596..3867934 | - | 339 | WP_000772639.1 | Arm DNA-binding domain-containing protein | - |
| I6J97_RS18590 () | 3868448..3869782 | - | 1335 | WP_001560839.1 | PLP-dependent aminotransferase family protein | - |
| I6J97_RS18595 () | 3869882..3870769 | + | 888 | WP_001560838.1 | DMT family transporter | - |
| I6J97_RS18600 () | 3871409..3871696 | + | 288 | WP_125077600.1 | hypothetical protein | - |
| I6J97_RS18605 () | 3871696..3872136 | + | 441 | WP_001560837.1 | hypothetical protein | - |
| I6J97_RS18610 () | 3872423..3873244 | + | 822 | WP_001560836.1 | DUF4145 domain-containing protein | - |
| I6J97_RS18615 () | 3873384..3873556 | - | 173 | Protein_3652 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| I6J97_RS18620 () | 3873550..3873936 | + | 387 | WP_019842908.1 | hypothetical protein | - |
| I6J97_RS18625 () | 3873938..3874381 | + | 444 | WP_001560834.1 | tail fiber assembly protein | - |
| I6J97_RS18630 () | 3874353..3874955 | - | 603 | WP_001560833.1 | tail fiber assembly protein | - |
| I6J97_RS18635 () | 3874955..3875725 | - | 771 | WP_001560832.1 | phage tail protein | - |
| I6J97_RS18640 () | 3875729..3876313 | - | 585 | WP_001560831.1 | YmfQ family protein | - |
| I6J97_RS18645 () | 3876304..3877362 | - | 1059 | WP_001560830.1 | baseplate J/gp47 family protein | - |
| I6J97_RS18650 () | 3877349..3877774 | - | 426 | WP_000424728.1 | phage GP46 family protein | - |
| I6J97_RS18655 () | 3877774..3878322 | - | 549 | WP_000643722.1 | phage baseplate assembly protein V | - |
| I6J97_RS18660 () | 3878322..3879401 | - | 1080 | WP_001560828.1 | phage tail protein | - |
| I6J97_RS18665 () | 3879398..3880726 | - | 1329 | WP_000219913.1 | DNA circularization N-terminal domain-containing protein | - |
| I6J97_RS18670 () | 3880788..3881318 | - | 531 | WP_001560827.1 | hypothetical protein | - |
| I6J97_RS18675 () | 3881410..3883242 | - | 1833 | WP_001560825.1 | phage tail tape measure protein | - |
| I6J97_RS18680 () | 3883384..3883653 | - | 270 | WP_000661047.1 | phage tail assembly protein | - |
| I6J97_RS18685 () | 3883653..3884009 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| I6J97_RS18690 () | 3884009..3885505 | - | 1497 | WP_001566173.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| I6J97_RS18695 () | 3885489..3885659 | - | 171 | WP_001560821.1 | DUF2635 domain-containing protein | - |
| I6J97_RS18700 () | 3885668..3886228 | - | 561 | WP_001560820.1 | hypothetical protein | - |
| I6J97_RS18705 () | 3886225..3886731 | - | 507 | WP_001560819.1 | hypothetical protein | - |
| I6J97_RS18710 () | 3886706..3887116 | - | 411 | WP_001560818.1 | phage head closure protein | - |
| I6J97_RS18715 () | 3887113..3887436 | - | 324 | WP_000927711.1 | head-tail connector protein | - |
| I6J97_RS18720 () | 3887439..3887639 | - | 201 | WP_000601360.1 | hypothetical protein | - |
| I6J97_RS18725 () | 3887689..3888894 | - | 1206 | WP_001560817.1 | phage major capsid protein | - |
| I6J97_RS18730 () | 3888909..3889559 | - | 651 | WP_001193631.1 | HK97 family phage prohead protease | - |
| I6J97_RS18735 () | 3889537..3890778 | - | 1242 | WP_001560816.1 | phage portal protein | - |
| I6J97_RS18740 () | 3890778..3890960 | - | 183 | WP_000605605.1 | hypothetical protein | - |
| I6J97_RS18745 () | 3890972..3892468 | - | 1497 | WP_072011717.1 | terminase large subunit | - |
| I6J97_RS18750 () | 3892702..3893196 | - | 495 | WP_001560815.1 | phage terminase small subunit P27 family | - |
| I6J97_RS18755 () | 3893322..3893672 | - | 351 | WP_001560814.1 | HNH endonuclease | - |
| I6J97_RS18760 () | 3894091..3894684 | - | 594 | WP_001560812.1 | hypothetical protein | - |
| I6J97_RS18765 () | 3895021..3895413 | - | 393 | WP_019842918.1 | DUF2570 domain-containing protein | - |
| I6J97_RS18770 () | 3895397..3895873 | - | 477 | WP_001560810.1 | glycoside hydrolase family protein | - |
| I6J97_RS18775 () | 3895877..3896203 | - | 327 | WP_001560809.1 | phage holin, lambda family | - |
| I6J97_RS18780 () | 3896485..3897576 | + | 1092 | WP_001560808.1 | hypothetical protein | - |
| I6J97_RS18785 () | 3897573..3897890 | + | 318 | WP_001560807.1 | STAS-like domain-containing protein | - |
| I6J97_RS18790 () | 3897890..3898351 | + | 462 | WP_001560806.1 | hypothetical protein | - |
| I6J97_RS18795 () | 3898386..3898730 | - | 345 | WP_001560805.1 | hypothetical protein | - |
| I6J97_RS18800 () | 3898748..3899737 | - | 990 | WP_001560804.1 | DUF968 domain-containing protein | - |
| I6J97_RS18805 () | 3899745..3900542 | - | 798 | WP_001061397.1 | KilA-N domain-containing protein | - |
| I6J97_RS18810 () | 3900562..3900951 | - | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| I6J97_RS18815 () | 3900948..3901274 | - | 327 | WP_001560803.1 | LexA repressor | - |
| I6J97_RS18820 () | 3901274..3901762 | - | 489 | WP_019842920.1 | PerC family transcriptional regulator | - |
| I6J97_RS18825 () | 3901759..3902700 | - | 942 | WP_001560801.1 | helix-turn-helix domain-containing protein | - |
| I6J97_RS18830 () | 3902690..3902869 | - | 180 | WP_071589348.1 | DUF4222 domain-containing protein | - |
| I6J97_RS18835 () | 3903045..3903596 | - | 552 | WP_001560799.1 | protein YmfL | - |
| I6J97_RS18840 () | 3903640..3903840 | - | 201 | WP_000649477.1 | helix-turn-helix domain-containing protein | - |
| I6J97_RS18845 () | 3903931..3904605 | + | 675 | WP_000848748.1 | LexA family transcriptional repressor | - |
| I6J97_RS18850 () | 3904778..3905074 | + | 297 | WP_000917896.1 | hypothetical protein | - |
| I6J97_RS18855 () | 3905350..3905660 | + | 311 | Protein_3700 | hypothetical protein | - |
| I6J97_RS18860 () | 3905675..3906037 | + | 363 | WP_000135682.1 | hypothetical protein | - |
| I6J97_RS18865 () | 3906103..3906927 | + | 825 | WP_000081287.1 | DUF2303 family protein | - |
| I6J97_RS18870 () | 3907055..3907591 | + | 537 | WP_000008200.1 | 5'-deoxynucleotidase | - |
| I6J97_RS18875 () | 3907582..3907944 | + | 363 | WP_001242749.1 | phage protein | - |
| I6J97_RS18880 () | 3907944..3908249 | + | 306 | WP_000206732.1 | hypothetical protein | - |
| I6J97_RS18885 () | 3908476..3909639 | + | 1164 | WP_001560798.1 | hypothetical protein ; Integrase | Integrase |
| I6J97_RS18895 () | 3909844..3911097 | - | 1254 | WP_000893298.1 | glutamate-5-semialdehyde dehydrogenase | - |
| I6J97_RS18900 () | 3911109..3912212 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| I6J97_RS18905 () | 3912501..3913556 | + | 1056 | WP_000749898.1 | phosphoporin PhoE | - |
| I6J97_RS18910 () | 3913595..3913996 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| I6J97_RS18915 () | 3914054..3915298 | - | 1245 | WP_000189573.1 | esterase FrsA | - |
| - () | 3914714..3914794 | - | 81 | NuclAT_4 | - | - |
| - () | 3914714..3914794 | - | 81 | NuclAT_4 | - | - |
| - () | 3914714..3914794 | - | 81 | NuclAT_4 | - | - |
| - () | 3914714..3914794 | - | 81 | NuclAT_4 | - | - |
| I6J97_RS18920 () | 3915390..3915848 | - | 459 | WP_001291991.1 | xanthine phosphoribosyltransferase | - |
| I6J97_RS18925 () | 3916109..3917566 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| I6J97_RS18930 () | 3917623..3918237 | - | 615 | WP_000602123.1 | peptide chain release factor H | - |
| I6J97_RS18935 () | 3918234..3919373 | - | 1140 | WP_000521578.1 | RNA ligase RtcB family protein | - |
| I6J97_RS18940 () | 3919563..3920015 | - | 453 | WP_001059897.1 | GNAT family N-acetyltransferase | - |
| I6J97_RS18945 () | 3920025..3920423 | - | 399 | WP_001518358.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| I6J97_RS18950 () | 3920426..3920719 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| I6J97_RS18955 () | 3920771..3921826 | - | 1056 | WP_001226170.1 | DNA polymerase IV | - |
| I6J97_RS18960 () | 3921897..3922682 | - | 786 | WP_000207543.1 | hypothetical protein | VF |
| I6J97_RS18965 () | 3922654..3924366 | + | 1713 | Protein_3721 | hypothetical protein | VF |
| I6J97_RS18970 () | 3924394..3924888 | + | 495 | WP_139174989.1 | hypothetical protein | - |
| I6J97_RS18975 () | 3924883..3925380 | - | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| I6J97_RS18980 () | 3925556..3926305 | - | 750 | WP_000093934.1 | hypothetical protein | VF |
| I6J97_RS18985 () | 3926617..3927357 | + | 741 | WP_001518356.1 | murein L,D-transpeptidase | - |
| I6J97_RS18990 () | 3927328..3928095 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| I6J97_RS18995 () | 3928300..3928878 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|