MGE detailed information
MGE type: Conjugative plasmid MGE length: 77233 bp
Accession: NZ_CP069502 Location: 1..77233 Organism: Escherichia coli strain FDAARGOS_1268 Replicon: plasmid unnamed1
Accession: NZ_CP069502 Location: 1..77233 Organism: Escherichia coli strain FDAARGOS_1268 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J98_RS23360 () | 1576..2949 | - | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| I6J98_RS23365 () | 2949..3311 | - | 363 | WP_135094044.1 | P-type conjugative transfer protein TrbJ | - |
| I6J98_RS23370 () | 3241..3786 | - | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| I6J98_RS23375 () | 3773..4054 | - | 282 | WP_000549795.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| I6J98_RS23380 () | 4170..4913 | - | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| I6J98_RS23385 () | 4906..5163 | - | 258 | WP_000864341.1 | conjugal transfer protein TrbE | - |
| I6J98_RS23390 () | 5190..7040 | - | 1851 | WP_000827530.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| I6J98_RS23395 () | 7037..7675 | - | 639 | WP_001104087.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| I6J98_RS23400 () | 7703..8155 | - | 453 | WP_000069429.1 | hypothetical protein | - |
| I6J98_RS23405 () | 8185..8646 | - | 462 | WP_000277843.1 | hypothetical protein | - |
| I6J98_RS23410 () | 8672..9664 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| I6J98_RS23415 () | 9661..10293 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| I6J98_RS23420 () | 10290..10676 | - | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| I6J98_RS23425 () | 10673..13303 | - | 2631 | WP_000069766.1 | type IV secretion system protein TraC | - |
| I6J98_RS23430 () | 13430..13777 | - | 348 | WP_000802783.1 | hypothetical protein | - |
| I6J98_RS23435 () | 13805..14023 | - | 219 | WP_000556754.1 | hypothetical protein | - |
| I6J98_RS23440 () | 14103..14576 | - | 474 | WP_000549598.1 | hypothetical protein | - |
| I6J98_RS23445 () | 14569..14790 | - | 222 | WP_011402773.1 | conjugal transfer protein TraR | - |
| I6J98_RS23450 () | 14925..15440 | - | 516 | WP_000724020.1 | type IV conjugative transfer system lipoprotein TraV | - |
| I6J98_RS23455 () | 15437..15805 | - | 369 | WP_001312858.1 | conjugal transfer protein TrbD | - |
| I6J98_RS23460 () | 15744..16334 | - | 591 | WP_000002789.1 | conjugal transfer protein TraP | - |
| I6J98_RS23465 () | 16324..17751 | - | 1428 | WP_000146658.1 | conjugal transfer protein TraB | - |
| I6J98_RS23470 () | 17751..18455 | - | 705 | WP_148717692.1 | type-F conjugative transfer system secretin TraK | - |
| I6J98_RS23475 () | 18466..19032 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| I6J98_RS23480 () | 19054..19365 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| I6J98_RS23485 () | 19380..19739 | - | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| I6J98_RS23490 () | 19773..20000 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| I6J98_RS23495 () | 20094..20780 | - | 687 | WP_001825184.1 | PAS domain-containing protein | - |
| I6J98_RS23500 () | 20971..21354 | - | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| I6J98_RS23505 () | 21631..22278 | + | 648 | WP_000614935.1 | hypothetical protein | VF |
| I6J98_RS23510 () | 22575..23396 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| I6J98_RS23515 () | 23515..23802 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| I6J98_RS23520 () | 23827..24033 | - | 207 | WP_000547971.1 | hypothetical protein | - |
| I6J98_RS23525 () | 24724..24882 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 24926..25150 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 24926..25150 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 24926..25150 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 24926..25150 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| I6J98_RS23530 () | 24962..25150 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| I6J98_RS23535 () | 25162..25881 | - | 720 | WP_060588692.1 | plasmid SOS inhibition protein A | - |
| I6J98_RS23540 () | 25878..26312 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| I6J98_RS23545 () | 26367..28325 | - | 1959 | WP_204088937.1 | ParB/RepB/Spo0J family partition protein | - |
| I6J98_RS23550 () | 28390..28623 | - | 234 | WP_000006030.1 | DUF905 family protein | - |
| I6J98_RS23555 () | 28685..29224 | - | 540 | WP_000290812.1 | single-stranded DNA-binding protein | - |
| I6J98_RS23560 () | 29250..29456 | - | 207 | WP_000547971.1 | hypothetical protein | - |
| I6J98_RS23565 () | 30082..30645 | - | 564 | WP_001312867.1 | class I SAM-dependent methyltransferase | - |
| I6J98_RS23570 () | 30693..32054 | - | 1362 | WP_060588691.1 | DUF3560 domain-containing protein | - |
| I6J98_RS23575 () | 32106..32336 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| I6J98_RS23580 () | 33374..33565 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| I6J98_RS23585 () | 33562..33984 | - | 423 | WP_135094045.1 | DUF1380 family protein | - |
| I6J98_RS23590 () | 34031..34333 | - | 303 | WP_001436678.1 | antirestriction protein | - |
| I6J98_RS23595 () | 34869..35639 | - | 771 | WP_204088938.1 | hypothetical protein | - |
| I6J98_RS23600 () | 35684..36118 | - | 435 | WP_000274486.1 | DUF1380 family protein | - |
| I6J98_RS23605 () | 36132..36353 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| I6J98_RS23610 () | 36354..37037 | - | 684 | WP_000085940.1 | DNA methylase | - |
| I6J98_RS23615 () | 37114..37406 | - | 293 | Protein_52 | hypothetical protein | - |
| I6J98_RS23620 () | 37556..38518 | + | 963 | WP_204088939.1 | plasmid segregation protein ParM | - |
| I6J98_RS23625 () | 38521..38871 | + | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| I6J98_RS23630 () | 39022..39534 | - | 513 | WP_001027529.1 | hypothetical protein | - |
| I6J98_RS23635 () | 39975..41510 | + | 1536 | WP_001282376.1 | pore-forming bacteriocin colicin B | - |
| I6J98_RS23640 () | 41528..42055 | - | 528 | WP_000203268.1 | colicin B immunity protein | - |
| I6J98_RS23645 () | 42298..43113 | + | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| I6J98_RS23650 () | 43163..43516 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| I6J98_RS23655 () | 43689..44471 | - | 783 | WP_032082922.1 | site-specific integrase | - |
| I6J98_RS23660 () | 44473..44886 | - | 414 | WP_001690258.1 | hypothetical protein | - |
| I6J98_RS23665 () | 45491..45688 | + | 198 | WP_000215657.1 | hypothetical protein | - |
| I6J98_RS23670 () | 45685..45969 | - | 285 | WP_000642771.1 | hypothetical protein | - |
| I6J98_RS23675 () | 45989..47122 | - | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| I6J98_RS23680 () | 47662..48462 | + | 801 | Protein_65 | 3-oxo-glucose-6-phosphate:glutamate aminotransferase | VF |
| I6J98_RS23685 () | 49238..49555 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| I6J98_RS23690 () | 49552..50085 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| I6J98_RS23695 () | 50179..51324 | - | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| I6J98_RS23700 () | 51648..51815 | - | 168 | Protein_69 | transposase | - |
| I6J98_RS23705 () | 51893..52165 | + | 273 | WP_000019163.1 | hypothetical protein | - |
| I6J98_RS23710 () | 52146..53354 | + | 1209 | WP_000198533.1 | IS91 family transposase ISSbo1 | Transposase |
| I6J98_RS23715 () | 53583..54302 | - | 720 | Protein_72 | 3'-5' exonuclease | - |
| I6J98_RS23720 () | 54557..54726 | - | 170 | Protein_73 | resolvase | - |
| I6J98_RS23725 () | 54722..55606 | - | 885 | WP_001345827.1 | hypothetical protein | - |
| I6J98_RS23730 () | 56540..57397 | - | 858 | WP_135094039.1 | incFII family plasmid replication initiator RepA | - |
| I6J98_RS23735 () | 57390..57464 | - | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| I6J98_RS23740 () | 57688..57948 | - | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| I6J98_RS23745 () | 58188..58778 | - | 591 | WP_001629336.1 | DUF2726 domain-containing protein | - |
| I6J98_RS23750 () | 58817..59026 | - | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| I6J98_RS23755 () | 59072..59521 | - | 450 | WP_113411083.1 | thermonuclease family protein | - |
| I6J98_RS23760 () | 59556..61127 | - | 1572 | WP_204088931.1 | IS66 family transposase ISCro1 | Transposase |
| I6J98_RS23765 () | 61147..61494 | - | 348 | WP_012904570.1 | IS66 family transposase ISCro1 | Transposase |
| I6J98_RS23770 () | 61494..62144 | - | 651 | WP_204088932.1 | IS66 family transposase IS679 | Transposase |
| I6J98_RS23775 () | 62491..62703 | - | 213 | WP_032303448.1 | hypothetical protein | - |
| I6J98_RS23780 () | 62879..64450 | - | 1572 | WP_204088933.1 | IS66 family transposase ISCro1 | Transposase |
| I6J98_RS23785 () | 64470..64817 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| I6J98_RS23790 () | 64817..65494 | - | 678 | WP_052928757.1 | IS66 family transposase ISCro1 | Transposase |
| I6J98_RS23795 () | 65531..66106 | - | 576 | WP_204088934.1 | fertility inhibition protein FinO | - |
| I6J98_RS23800 () | 66160..66906 | - | 747 | WP_204088935.1 | conjugal transfer pilus acetylase TraX | - |
| I6J98_RS23805 () | 66926..72196 | - | 5271 | WP_204088936.1 | Multifunctional conjugation protein TraI | Relaxase |
| I6J98_RS23810 () | 72196..74457 | - | 2262 | WP_096790750.1 | type IV conjugative transfer system coupling protein TraD | - |
| I6J98_RS23815 () | 74709..75440 | - | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| I6J98_RS23820 () | 75472..75975 | - | 504 | WP_000605510.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|