MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 38919 bp
Accession: NZ_CP069500 Location: 1609051..1647969 Organism: Escherichia coli strain FDAARGOS_1258 Replicon: chromosome
Accession: NZ_CP069500 Location: 1609051..1647969 Organism: Escherichia coli strain FDAARGOS_1258 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J88_RS08175 () | 1605121..1605684 | + | 564 | WP_000573321.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
| I6J88_RS08180 () | 1605681..1606640 | + | 960 | WP_016238457.1 | PTS glucitol/sorbitol transporter subunit IIB | - |
| I6J88_RS08185 () | 1606651..1607022 | + | 372 | WP_016238458.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| I6J88_RS08190 () | 1607026..1607805 | + | 780 | WP_001077354.1 | sorbitol-6-phosphate dehydrogenase | - |
| I6J88_RS08195 () | 1607911..1608270 | + | 360 | WP_000252912.1 | transcriptional regulator GutM | - |
| I6J88_RS08200 () | 1608337..1609110 | + | 774 | WP_000804544.1 | glucitol operon DNA-binding transcriptional repressor SrlR | - |
| I6J88_RS08205 () | 1609103..1610068 | + | 966 | WP_001287423.1 | Signal transduction histidine-protein kinase BaeS | VF |
| I6J88_RS08210 () | 1610065..1611579 | - | 1515 | WP_000010760.1 | Putative multidrug resistance protein MdtD | VF |
| I6J88_RS08215 () | 1611766..1613205 | + | 1440 | WP_000029647.1 | anaerobic nitric oxide reductase flavorubredoxin | - |
| I6J88_RS08220 () | 1613202..1614335 | + | 1134 | WP_000064713.1 | NADH:flavorubredoxin reductase NorW | - |
| I6J88_RS08225 () | 1614559..1616811 | - | 2253 | WP_001535518.1 | carbamoyltransferase HypF | - |
| I6J88_RS08230 () | 1616964..1617491 | - | 528 | WP_001078777.1 | electron transport protein HydN | - |
| I6J88_RS08235 () | 1617876..1618304 | + | 429 | WP_000536066.1 | DUF4259 domain-containing protein | - |
| I6J88_RS08240 () | 1618396..1618815 | - | 420 | WP_000126304.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| I6J88_RS08245 () | 1618812..1619123 | - | 312 | WP_000547563.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| I6J88_RS08250 () | 1619286..1620041 | - | 756 | WP_001314074.1 | hypothetical protein | - |
| I6J88_RS08255 () | 1620084..1620551 | - | 468 | WP_000132955.1 | hydrogenase maturation peptidase HycI | - |
| I6J88_RS08260 () | 1620544..1620954 | - | 411 | WP_001291918.1 | formate hydrogenlyase assembly protein HycH | - |
| I6J88_RS08265 () | 1620951..1621718 | - | 768 | WP_000067399.1 | formate hydrogenlyase subunit HycG | - |
| I6J88_RS08270 () | 1621718..1622260 | - | 543 | WP_000493800.1 | formate hydrogenlyase subunit HycF | - |
| I6J88_RS08275 () | 1622270..1623979 | - | 1710 | WP_001288123.1 | formate hydrogenlyase subunit HycE | - |
| I6J88_RS08280 () | 1623997..1624920 | - | 924 | WP_000115226.1 | formate hydrogenlyase subunit HycD | - |
| I6J88_RS08285 () | 1624923..1626749 | - | 1827 | WP_001274429.1 | formate hydrogenlyase subunit 3 | - |
| I6J88_RS08290 () | 1626746..1627357 | - | 612 | WP_001079173.1 | formate hydrogenlyase subunit HycB | - |
| I6J88_RS08295 () | 1627482..1627943 | - | 462 | WP_000158056.1 | formate hydrogenlyase regulator HycA | - |
| I6J88_RS08300 () | 1628155..1628505 | + | 351 | WP_001299100.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| I6J88_RS08305 () | 1628509..1629381 | + | 873 | WP_000337654.1 | hydrogenase nickel incorporation protein HypB | - |
| I6J88_RS08310 () | 1629372..1629644 | + | 273 | WP_000334881.1 | hydrogenase 3 maturation protein HypC | - |
| I6J88_RS08315 () | 1629644..1630765 | + | 1122 | WP_001212967.1 | hydrogenase formation protein HypD | - |
| I6J88_RS08320 () | 1630762..1631772 | + | 1011 | WP_001059916.1 | hydrogenase maturation carbamoyl dehydratase HypE | - |
| I6J88_RS08325 () | 1631846..1633924 | + | 2079 | WP_000122674.1 | Anaerobic nitric oxide reductase transcription regulator NorR | VF |
| I6J88_RS08330 () | 1633969..1634397 | + | 429 | WP_000301062.1 | TOBE domain-containing protein | - |
| I6J88_RS08335 () | 1634436..1634780 | - | 345 | WP_000015482.1 | nitrous oxide-stimulated promoter family protein | - |
| I6J88_RS08340 () | 1635852..1637660 | - | 1809 | WP_000710784.1 | DUF4209 domain-containing protein | - |
| I6J88_RS08345 () | 1637922..1638359 | + | 438 | WP_001536247.1 | hypothetical protein | - |
| I6J88_RS08350 () | 1638328..1639527 | + | 1200 | WP_001536248.1 | relaxase/mobilization nuclease domain-containing protein | - |
| I6J88_RS08355 () | 1640112..1640537 | - | 426 | WP_000336170.1 | hypothetical protein | - |
| I6J88_RS08360 () | 1641449..1641964 | + | 516 | WP_000611155.1 | MarR family transcriptional regulator | - |
| I6J88_RS08365 () | 1642089..1643072 | - | 984 | WP_000020904.1 | hypothetical protein | - |
| I6J88_RS08370 () | 1643232..1643816 | - | 585 | WP_001272879.1 | hypothetical protein | - |
| I6J88_RS08375 () | 1643828..1645285 | - | 1458 | WP_016238459.1 | Transmembrane protein EpsG ; Integrase | Integrase |
| I6J88_RS08380 () | 1645432..1647999 | + | 2568 | WP_001467843.1 | DNA mismatch repair protein MutS | - |
| I6J88_RS08385 () | 1648105..1648761 | + | 657 | WP_001141304.1 | protein-serine/threonine phosphatase | - |
| I6J88_RS08390 () | 1648812..1649579 | - | 768 | WP_001298167.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| I6J88_RS08395 () | 1649775..1650683 | + | 909 | WP_000847998.1 | NAD(P)-dependent oxidoreductase | - |
| I6J88_RS08400 () | 1650680..1651942 | + | 1263 | WP_000590416.1 | four-carbon acid sugar kinase family protein | - |
| I6J88_RS08405 () | 1651939..1652577 | + | 639 | WP_001278992.1 | aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|