MGE detailed information
MGE type: Genomic_island MGE length: 10583 bp
Accession: NZ_CP069459 Location: 842103..852685 Organism: Escherichia coli strain FDAARGOS_1249 Replicon: chromosome
Accession: NZ_CP069459 Location: 842103..852685 Organism: Escherichia coli strain FDAARGOS_1249 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J79_RS03925 () | 839154..840122 | + | 969 | WP_073970534.1 | IS5 family transposase | - |
| I6J79_RS03930 () | 840181..841701 | - | 1521 | Protein_776 | sulfatase | - |
| I6J79_RS03935 () | 842103..842864 | - | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| I6J79_RS03940 () | 842939..843136 | - | 198 | WP_000543384.1 | two-component system connector SafA | - |
| I6J79_RS03945 () | 843384..845663 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| I6J79_RS03950 () | 845997..846911 | - | 915 | WP_000520676.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| I6J79_RS03955 () | 846970..847473 | - | 504 | WP_000825452.1 | Protein FimG | VF |
| I6J79_RS03960 () | 847541..848509 | + | 969 | WP_073970534.1 | IS5 family transposase IS903 | Transposase |
| I6J79_RS03965 () | 848555..849082 | - | 528 | WP_061330118.1 | Protein FimF | VF |
| I6J79_RS03970 () | 849096..850322 | - | 1227 | Protein_784 | Outer membrane usher protein FimD | VF |
| I6J79_RS03975 () | 850577..850785 | - | 209 | Protein_785 | helix-turn-helix transcriptional regulator | - |
| I6J79_RS03980 () | 851097..852419 | - | 1323 | WP_094321072.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| I6J79_RS03985 () | 852419..852685 | - | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| I6J79_RS03990 () | 852908..854308 | - | 1401 | WP_001083595.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.008 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.008 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.009 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.008 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.008 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.008 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.008 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.008 |