MGE detailed information
MGE type: Genomic_island MGE length: 20682 bp
Accession: NZ_CP069451 Location: 1281267..1301948 Organism: Escherichia coli strain FDAARGOS_1256 Replicon: chromosome
Accession: NZ_CP069451 Location: 1281267..1301948 Organism: Escherichia coli strain FDAARGOS_1256 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J86_RS05995 () | 1277382..1277807 | - | 426 | WP_001189667.1 | type VI secretion system baseplate subunit TssE | - |
| I6J86_RS06000 () | 1277812..1279296 | - | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| I6J86_RS06005 () | 1279319..1279822 | - | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| I6J86_RS06010 () | 1280528..1281046 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| I6J86_RS06015 () | 1281267..1283249 | + | 1983 | WP_000053624.1 | hypothetical protein | VF |
| I6J86_RS06020 () | 1283356..1284402 | + | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| I6J86_RS06025 () | 1284395..1285834 | + | 1440 | WP_000528851.1 | DUF4150 domain-containing protein | - |
| I6J86_RS06030 () | 1285809..1286099 | + | 291 | WP_000513317.1 | hypothetical protein | - |
| I6J86_RS06035 () | 1286357..1287121 | + | 765 | Protein_1163 | ISAs1 family transposase | - |
| I6J86_RS06040 () | 1287350..1287853 | + | 504 | WP_000227712.1 | hypothetical protein | - |
| I6J86_RS06045 () | 1287947..1288435 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| I6J86_RS06050 () | 1288461..1288655 | + | 195 | Protein_1166 | transposase | - |
| I6J86_RS06055 () | 1288706..1289476 | - | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| I6J86_RS06060 () | 1289657..1290103 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| I6J86_RS06065 () | 1290146..1292590 | - | 2445 | WP_000973131.1 | Protein translocase subunit SecD | VF |
| I6J86_RS06070 () | 1292830..1293408 | + | 579 | WP_000284050.1 | Sec translocon accessory complex subunit YajC | VF |
| I6J86_RS06075 () | 1293613..1294380 | + | 768 | WP_001298195.1 | class II glutamine amidotransferase | - |
| I6J86_RS06080 () | 1294351..1295091 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| I6J86_RS06085 () | 1295403..1296152 | + | 750 | WP_000093934.1 | hypothetical protein | VF |
| I6J86_RS06090 () | 1296328..1296825 | + | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| I6J86_RS06095 () | 1296908..1297117 | - | 210 | WP_071778446.1 | hypothetical protein | - |
| I6J86_RS06100 () | 1297145..1298857 | - | 1713 | Protein_1176 | Virulence sensor protein BvgS | VF |
| I6J86_RS06105 () | 1298829..1299614 | + | 786 | WP_000207578.1 | Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme | VF |
| I6J86_RS06110 () | 1299685..1300740 | + | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| I6J86_RS06115 () | 1300792..1301085 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| I6J86_RS06120 () | 1301088..1301486 | + | 399 | WP_204159020.1 | type II toxin-antitoxin system YafO family toxin | Toxin Detail |
| I6J86_RS06125 () | 1301496..1301948 | + | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| I6J86_RS06130 () | 1302138..1303277 | + | 1140 | WP_000521561.1 | RNA ligase RtcB family protein | - |
| I6J86_RS06135 () | 1303274..1303888 | + | 615 | WP_000602124.1 | peptide chain release factor H | - |
| I6J86_RS06140 () | 1303945..1305402 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| I6J86_RS06145 () | 1305663..1306121 | + | 459 | WP_001291991.1 | xanthine phosphoribosyltransferase | - |
| - () | 1306717..1306797 | + | 81 | NuclAT_4 | - | - |
| - () | 1306717..1306797 | + | 81 | NuclAT_4 | - | - |
| - () | 1306717..1306797 | + | 81 | NuclAT_4 | - | - |
| - () | 1306717..1306797 | + | 81 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|