MGE detailed information
MGE type: Genomic_island MGE length: 12019 bp
Accession: NZ_CP069438 Location: 3688417..3700435 Organism: Escherichia coli strain FDAARGOS_1260 Replicon: chromosome
Accession: NZ_CP069438 Location: 3688417..3700435 Organism: Escherichia coli strain FDAARGOS_1260 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J90_RS17895 () | 3683506..3684312 | - | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| I6J90_RS17900 () | 3684325..3685638 | - | 1314 | WP_001519300.1 | galactitol-specific PTS transporter subunit IIC | - |
| I6J90_RS17905 () | 3685650..3685928 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| I6J90_RS17910 () | 3685925..3687046 | - | 1122 | WP_000010833.1 | M42 family metallopeptidase | - |
| I6J90_RS17915 () | 3687291..3687407 | - | 117 | Protein_3496 | VOC family protein | - |
| I6J90_RS17920 () | 3687445..3687705 | - | 261 | WP_000084876.1 | hypothetical protein | - |
| I6J90_RS17925 () | 3687832..3688380 | - | 549 | WP_001519301.1 | hypothetical protein | - |
| I6J90_RS17930 () | 3688417..3688578 | - | 162 | WP_001519302.1 | hypothetical protein | - |
| I6J90_RS17935 () | 3688630..3689181 | - | 552 | WP_001519303.1 | N-acetyltransferase | Antitoxin Detail |
| I6J90_RS17940 () | 3689193..3689450 | - | 258 | WP_001550554.1 | hypothetical protein | Toxin Detail |
| I6J90_RS17945 () | 3689827..3690126 | - | 300 | WP_001519304.1 | GNAT family N-acetyltransferase | - |
| I6J90_RS17950 () | 3690189..3691430 | + | 1242 | Protein_3503 | DNA helicase | - |
| I6J90_RS17955 () | 3692013..3692993 | - | 981 | WP_001519307.1 | transposase | - |
| I6J90_RS17960 () | 3693058..3694164 | - | 1107 | WP_001519308.1 | N-acetylneuraminate epimerase | - |
| I6J90_RS17965 () | 3694184..3694900 | - | 717 | WP_001519309.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| I6J90_RS17970 () | 3696364..3696966 | + | 603 | WP_001519310.1 | Tyrosine recombinase XerC | VF |
| I6J90_RS17975 () | 3697444..3698040 | + | 597 | WP_000044708.1 | Tyrosine recombinase XerD | VF |
| I6J90_RS17980 () | 3698521..3699069 | + | 549 | WP_001357506.1 | Type-1 fimbrial protein, A chain | VF |
| I6J90_RS17985 () | 3699134..3699673 | + | 540 | WP_000824099.1 | putative major fimbrial subunit LpfA | VF |
| I6J90_RS17990 () | 3699710..3700435 | + | 726 | WP_000066559.1 | Chaperone protein FimC | VF |
| I6J90_RS17995 () | 3700501..3703137 | + | 2637 | WP_000120954.1 | fimbrial usher FimD | - |
| I6J90_RS18000 () | 3703147..3703677 | + | 531 | WP_001244821.1 | type 1 fimbria minor subunit FimF | - |
| I6J90_RS18005 () | 3703690..3704193 | + | 504 | WP_000870577.1 | type 1 fimbria minor subunit FimG | - |
| I6J90_RS18010 () | 3704213..3705115 | + | 903 | WP_000832236.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|