MGE detailed information
MGE type: Genomic_island MGE length: 24980 bp
Accession: NZ_CP069438 Location: 3408097..3433076 Organism: Escherichia coli strain FDAARGOS_1260 Replicon: chromosome
Accession: NZ_CP069438 Location: 3408097..3433076 Organism: Escherichia coli strain FDAARGOS_1260 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J90_RS16475 () | 3404502..3405221 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| I6J90_RS16480 () | 3405218..3406849 | - | 1632 | WP_001216466.1 | sensor histidine kinase | - |
| I6J90_RS16485 () | 3407030..3407260 | + | 231 | WP_000373291.1 | (4Fe-4S)-binding protein | - |
| I6J90_RS16490 () | 3407272..3407544 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| I6J90_RS16495 () | 3407773..3408069 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| I6J90_RS16500 () | 3408097..3408270 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| I6J90_RS16505 () | 3408389..3409906 | - | 1518 | WP_000003805.1 | lysine--tRNA ligase | - |
| I6J90_RS16510 () | 3410143..3411600 | - | 1458 | WP_000856828.1 | dipeptide/tripeptide permease DtpC | - |
| I6J90_RS16515 () | 3411659..3413806 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| I6J90_RS16520 () | 3413886..3415220 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| I6J90_RS16525 () | 3415586..3417124 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| I6J90_RS16530 () | 3417861..3418715 | - | 855 | WP_001588930.1 | DUF4942 domain-containing protein | - |
| I6J90_RS16535 () | 3418800..3418997 | - | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| I6J90_RS16540 () | 3419009..3419497 | - | 489 | WP_059342216.1 | hypothetical protein | - |
| I6J90_RS16545 () | 3419494..3419871 | - | 378 | WP_000854747.1 | TA system toxin CbtA family protein | Toxin Detail |
| I6J90_RS16550 () | 3419961..3420329 | - | 369 | WP_021538665.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| I6J90_RS16555 () | 3420404..3420625 | - | 222 | WP_001825901.1 | DUF987 domain-containing protein | - |
| I6J90_RS16560 () | 3420688..3421164 | - | 477 | WP_001186727.1 | RadC family protein | - |
| I6J90_RS16565 () | 3421180..3421665 | - | 486 | WP_021566656.1 | antirestriction protein | - |
| I6J90_RS16570 () | 3421757..3422575 | - | 819 | WP_001234693.1 | DUF945 domain-containing protein | - |
| I6J90_RS16575 () | 3422676..3422909 | - | 234 | WP_021538212.1 | DUF905 family protein | - |
| I6J90_RS16580 () | 3422915..3423592 | - | 678 | WP_001097364.1 | hypothetical protein | - |
| I6J90_RS16585 () | 3423711..3424595 | - | 885 | WP_000010387.1 | 50S ribosome-binding GTPase | - |
| I6J90_RS16590 () | 3424702..3425634 | + | 933 | WP_021538213.1 | hypothetical protein | - |
| I6J90_RS16595 () | 3425631..3426440 | - | 810 | WP_000816117.1 | hypothetical protein | - |
| I6J90_RS16600 () | 3427773..3428303 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| I6J90_RS16605 () | 3428973..3429704 | + | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| I6J90_RS16610 () | 3430225..3430677 | + | 453 | WP_000558152.1 | N-acetyltransferase | - |
| I6J90_RS16615 () | 3431213..3432148 | + | 936 | WP_000332862.1 | pseudouridine kinase | - |
| I6J90_RS16620 () | 3432141..3433076 | + | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| I6J90_RS16625 () | 3433160..3434410 | + | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| I6J90_RS16630 () | 3434429..3435523 | - | 1095 | WP_000370278.1 | sugar kinase | - |
| I6J90_RS16635 () | 3436851..3437417 | + | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|