MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 124066 bp
Accession: NZ_CP069386 Location: 3235635..3359700 Organism: Escherichia coli strain XH1815 Replicon: chromosome
Accession: NZ_CP069386 Location: 3235635..3359700 Organism: Escherichia coli strain XH1815 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JSW75_RS15500 (3230876) | 3230876..3231646 | - | 771 | WP_001338213.1 | threonine/serine exporter ThrE family protein | - |
| JSW75_RS15505 (3232265) | 3232265..3232990 | + | 726 | WP_000936635.1 | response regulator transcription factor | - |
| JSW75_RS15510 (3232948) | 3232948..3233625 | + | 678 | WP_001301727.1 | DNA-binding transcriptional activator BglJ | - |
| JSW75_RS15515 (3233663) | 3233663..3234451 | - | 789 | WP_000331618.1 | siderophore-iron reductase FhuF | - |
| JSW75_RS15520 (3234592) | 3234592..3234828 | + | 237 | WP_001393508.1 | DUF1435 domain-containing protein | - |
| JSW75_RS15540 (3235457) | 3235457..3236488 | - | 1032 | WP_001272330.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| JSW75_RS15545 (3236591) | 3236591..3237004 | + | 414 | WP_000204012.1 | DNA polymerase III subunit psi | - |
| JSW75_RS15550 (3236973) | 3236973..3237419 | + | 447 | WP_001092461.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| JSW75_RS15555 (3237434) | 3237434..3238111 | + | 678 | WP_000870710.1 | pyrimidine 5'-nucleotidase | - |
| JSW75_RS15560 (3238876) | 3238876..3239070 | + | 195 | WP_000127614.1 | DNA-binding protein | - |
| JSW75_RS15565 (3239087) | 3239087..3240328 | - | 1242 | WP_064497193.1 | integrase family protein | - |
| JSW75_RS15570 (3240330) | 3240330..3240599 | - | 270 | WP_064497194.1 | hypothetical protein | - |
| JSW75_RS15575 (3240602) | 3240602..3241576 | - | 975 | WP_000497807.1 | ParM/StbA family protein | - |
| JSW75_RS15580 (3242041) | 3242041..3242484 | + | 444 | WP_000348524.1 | conjugative transfer protein MobI(A/C) | - |
| JSW75_RS15585 (3242495) | 3242495..3243667 | - | 1173 | WP_001142610.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| JSW75_RS15590 (3243951) | 3243951..3244544 | + | 594 | WP_000107352.1 | Tn3 family transposase | - |
| JSW75_RS15595 (3244658) | 3244658..3247636 | + | 2979 | WP_000985631.1 | Tn3 family transposase | - |
| JSW75_RS15600 (3248054) | 3248054..3249546 | + | 1493 | Protein_3041 | IS91-like element ISVsa3 family transposase | - |
| JSW75_RS15605 (3249752) | 3249752..3250216 | + | 465 | WP_216685309.1 | hypothetical protein | - |
| JSW75_RS15610 (3250436) | 3250436..3251341 | + | 906 | WP_143475834.1 | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(42) | - |
| JSW75_RS15615 (3251364) | 3251364..3251819 | + | 456 | Protein_3044 | GMP synthase (glutamine-hydrolyzing) | - |
| JSW75_RS15620 (3251931) | 3251931..3253430 | + | 1500 | WP_192176703.1 | IS91 family transposase | - |
| JSW75_RS23215 (3253461) | 3253461..3254345 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| JSW75_RS15630 (3254562) | 3254562..3255774 | + | 1213 | Protein_3047 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| JSW75_RS15635 (3255802) | 3255802..3256107 | + | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| JSW75_RS15640 (3256219) | 3256219..3256623 | + | 405 | Protein_3049 | IS91 family transposase | - |
| JSW75_RS15645 (3256730) | 3256730..3257566 | - | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| JSW75_RS15650 (3257566) | 3257566..3257716 | - | 151 | Protein_3051 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| JSW75_RS23220 (3257742) | 3257742..3257795 | - | 54 | Protein_3052 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JSW75_RS15660 (3257878) | 3257878..3258657 | - | 780 | WP_058199817.1 | APH(3')-VI family aminoglycoside O-phosphotransferase | - |
| JSW75_RS15665 (3259062) | 3259062..3259898 | - | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| JSW75_RS15670 (3259898) | 3259898..3260026 | - | 129 | Protein_3055 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| JSW75_RS15680 (3260209) | 3260209..3260986 | - | 778 | Protein_3056 | APH(3')-VI family aminoglycoside O-phosphotransferase | - |
| JSW75_RS15685 (3261392) | 3261392..3262229 | - | 838 | Protein_3057 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| JSW75_RS15690 (3262229) | 3262229..3263032 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| JSW75_RS15695 (3263093) | 3263093..3263907 | - | 815 | Protein_3059 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| JSW75_RS15700 (3264378) | 3264378..3264917 | + | 540 | Protein_3060 | DUF4158 domain-containing protein | - |
| JSW75_RS15705 (3264984) | 3264984..3266137 | + | 1154 | WP_102140835.1 | IS3 family transposase | - |
| JSW75_RS15710 (3266148) | 3266148..3267197 | - | 1050 | WP_143475780.1 | hypothetical protein | - |
| JSW75_RS15715 (3267583) | 3267583..3268446 | - | 864 | WP_025441399.1 | class A beta-lactamase | - |
| JSW75_RS15720 (3268913) | 3268913..3269023 | - | 111 | Protein_3064 | UV protection and mutation protein | - |
| JSW75_RS15725 (3269665) | 3269665..3270570 | + | 906 | WP_048609065.1 | 3'-5' exonuclease | - |
| JSW75_RS15730 (3270658) | 3270658..3270957 | + | 300 | WP_048609064.1 | hypothetical protein | - |
| JSW75_RS15735 (3271275) | 3271275..3272255 | + | 981 | WP_048609063.1 | WYL domain-containing protein | - |
| JSW75_RS15740 (3272264) | 3272264..3273979 | + | 1716 | WP_001065598.1 | type I restriction-modification system subunit M | - |
| JSW75_RS15745 (3273972) | 3273972..3274676 | + | 705 | WP_000829999.1 | restriction endonuclease subunit S | - |
| JSW75_RS15750 (3274673) | 3274673..3275827 | + | 1155 | WP_002040530.1 | BstXI family restriction endonuclease | - |
| JSW75_RS15755 (3275832) | 3275832..3278996 | + | 3165 | WP_048609060.1 | type I restriction endonuclease subunit R | - |
| JSW75_RS15760 (3279012) | 3279012..3279998 | + | 987 | WP_223231882.1 | hypothetical protein | - |
| JSW75_RS15765 (3280012) | 3280012..3280932 | - | 921 | WP_071237192.1 | IS5 family transposase | - |
| JSW75_RS15770 (3281047) | 3281047..3282273 | + | 1227 | Protein_3074 | AAA family ATPase | - |
| JSW75_RS15775 (3282273) | 3282273..3283400 | + | 1128 | WP_001277095.1 | 5-methylcytosine-specific restriction endonuclease system specificity protein McrC | - |
| JSW75_RS15780 (3283400) | 3283400..3284254 | + | 855 | WP_000255863.1 | restriction endonuclease | - |
| JSW75_RS23225 (3284348) | 3284348..3284629 | + | 282 | WP_001067695.1 | hypothetical protein | - |
| JSW75_RS15790 (3284629) | 3284629..3285102 | + | 474 | WP_001145412.1 | hypothetical protein | - |
| JSW75_RS15795 (3285222) | 3285222..3287372 | + | 2151 | WP_048609057.1 | MobH family relaxase | - |
| JSW75_RS15800 (3287421) | 3287421..3289241 | + | 1821 | WP_048609054.1 | conjugative transfer system coupling protein TraD | - |
| JSW75_RS15805 (3289251) | 3289251..3289811 | + | 561 | WP_000546513.1 | hypothetical protein | - |
| JSW75_RS15810 (3289798) | 3289798..3290433 | + | 636 | WP_045611026.1 | DUF4400 domain-containing protein | - |
| JSW75_RS15815 (3290460) | 3290460..3291047 | - | 588 | WP_085285720.1 | plasmid-related protein | - |
| JSW75_RS15820 (3291336) | 3291336..3291617 | + | 282 | WP_000433889.1 | type IV conjugative transfer system protein TraL | - |
| JSW75_RS15825 (3291614) | 3291614..3292240 | + | 627 | WP_000667170.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| JSW75_RS15830 (3292224) | 3292224..3293120 | + | 897 | WP_048608549.1 | type-F conjugative transfer system secretin TraK | - |
| JSW75_RS15835 (3293123) | 3293123..3294412 | + | 1290 | WP_143475779.1 | TraB/VirB10 family protein | - |
| JSW75_RS15840 (3294487) | 3294487..3295059 | + | 573 | WP_024008834.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JSW75_RS15845 (3295056) | 3295056..3295442 | + | 387 | WP_032469918.1 | TraA family conjugative transfer protein | - |
| JSW75_RS15850 (3295663) | 3295663..3296454 | + | 792 | WP_000095577.1 | type IV toxin-antitoxin system AbiEi family antitoxin | Antitoxin Detail |
| JSW75_RS15855 (3296447) | 3296447..3297385 | + | 939 | WP_064497040.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| JSW75_RS15860 (3297517) | 3297517..3298209 | + | 693 | WP_001228924.1 | DsbC family protein | - |
| JSW75_RS15865 (3298209) | 3298209..3300608 | + | 2400 | WP_064497039.1 | type IV secretion system protein TraC | - |
| JSW75_RS15870 (3300601) | 3300601..3300948 | + | 348 | WP_064497038.1 | hypothetical protein | - |
| JSW75_RS15875 (3300932) | 3300932..3301444 | + | 513 | WP_175215521.1 | S26 family signal peptidase | - |
| JSW75_RS15880 (3301536) | 3301536..3302579 | + | 1044 | WP_223231883.1 | TrbC family F-type conjugative pilus assembly protein | - |
| JSW75_RS15885 (3302563) | 3302563..3303591 | + | 1029 | WP_000735887.1 | TraU family protein | - |
| JSW75_RS15890 (3303594) | 3303594..3307286 | + | 3693 | WP_064497036.1 | conjugal transfer protein TraN | - |
| JSW75_RS15895 (3307745) | 3307745..3309163 | + | 1419 | WP_004249371.1 | SIR2 family protein | - |
| JSW75_RS15900 (3309160) | 3309160..3311199 | + | 2040 | WP_004249372.1 | DUF87 domain-containing protein | - |
| JSW75_RS15905 (3311608) | 3311608..3312282 | - | 675 | WP_048608563.1 | endonuclease | - |
| JSW75_RS15910 (3312324) | 3312324..3313611 | - | 1288 | Protein_3102 | ISL3 family transposase | - |
| JSW75_RS15915 (3313633) | 3313633..3314144 | - | 512 | Protein_3103 | signal peptidase II | - |
| JSW75_RS15920 (3314148) | 3314148..3315044 | - | 897 | WP_053409936.1 | cation transporter | - |
| JSW75_RS15925 (3315140) | 3315140..3315547 | + | 408 | WP_053409935.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| JSW75_RS15930 (3316011) | 3316011..3316280 | - | 270 | Protein_3106 | site-specific integrase | - |
| JSW75_RS23230 (3316292) | 3316292..3316483 | - | 192 | WP_009873362.1 | hypothetical protein | - |
| JSW75_RS15940 (3316488) | 3316488..3316826 | - | 339 | WP_002310911.1 | hypothetical protein | - |
| JSW75_RS15945 (3316730) | 3316730..3317920 | - | 1191 | WP_053409934.1 | tetracycline efflux MFS transporter Tet(C) | - |
| JSW75_RS15950 (3318013) | 3318013..3318672 | + | 660 | WP_001038045.1 | tetracycline resistance transcriptional repressor TetR(C) | - |
| JSW75_RS15960 (3319505) | 3319505..3320209 | + | 705 | WP_216685310.1 | IS6-like element IS26 family transposase | - |
| JSW75_RS15965 (3320264) | 3320264..3320689 | + | 426 | Protein_3112 | TetR/AcrR family transcriptional regulator | - |
| JSW75_RS15970 (3320709) | 3320709..3321497 | + | 789 | WP_014839978.1 | winged helix-turn-helix domain-containing protein | - |
| JSW75_RS15975 (3321497) | 3321497..3322016 | + | 520 | Protein_3114 | FidL-like protein | - |
| JSW75_RS15980 (3322021) | 3322021..3322437 | - | 417 | WP_014839980.1 | fosfomycin resistance glutathione transferase FosA3 | - |
| JSW75_RS15985 (3322823) | 3322823..3323527 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| JSW75_RS15990 (3323637) | 3323637..3324149 | + | 513 | WP_228766823.1 | PAS domain-containing protein | - |
| JSW75_RS15995 (3324124) | 3324124..3325221 | - | 1098 | Protein_3118 | TonB-dependent receptor | - |
| JSW75_RS16000 (3325278) | 3325278..3326246 | - | 969 | WP_013362812.1 | IS5-like element IS903B family transposase | - |
| JSW75_RS16005 (3326281) | 3326281..3327156 | - | 876 | WP_013188475.1 | extended-spectrum class A beta-lactamase CTX-M-65 | - |
| JSW75_RS16010 (3327406) | 3327406..3327597 | - | 192 | Protein_3121 | IS1380 family transposase | - |
| JSW75_RS16015 (3327661) | 3327661..3327789 | - | 129 | WP_002210551.1 | hypothetical protein | - |
| JSW75_RS16025 (3328287) | 3328287..3328793 | - | 507 | WP_064497327.1 | hypothetical protein | - |
| JSW75_RS16030 (3328885) | 3328885..3329589 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| JSW75_RS16035 (3329654) | 3329654..3329818 | - | 165 | Protein_3125 | recombinase family protein | - |
| JSW75_RS16040 (3329944) | 3329944..3330294 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| JSW75_RS16045 (3330450) | 3330450..3331154 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| JSW75_RS16050 (3331276) | 3331276..3331980 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| JSW75_RS16055 (3332034) | 3332034..3332435 | + | 402 | Protein_3129 | recombinase family protein | - |
| JSW75_RS16060 (3332438) | 3332438..3335389 | + | 2952 | WP_124785907.1 | Tn3-like element TnAs3 family transposase | - |
| JSW75_RS16065 (3335323) | 3335323..3335799 | + | 477 | WP_223171565.1 | hypothetical protein | - |
| JSW75_RS16070 (3335884) | 3335884..3336588 | - | 705 | WP_001067784.1 | IS6-like element IS1006 family transposase | - |
| JSW75_RS16075 (3336652) | 3336652..3337482 | + | 831 | Protein_3133 | IS91-like element ISVsa3 family transposase | - |
| JSW75_RS23235 (3337513) | 3337513..3338397 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| JSW75_RS16085 (3338614) | 3338614..3339827 | + | 1214 | Protein_3135 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| JSW75_RS16090 (3339855) | 3339855..3340160 | + | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| JSW75_RS16095 (3340272) | 3340272..3341765 | + | 1494 | WP_015344975.1 | IS91-like element ISVsa3 family transposase | - |
| JSW75_RS16100 (3341941) | 3341941..3342243 | - | 303 | WP_000251875.1 | phosphoglucosamine mutase | - |
| JSW75_RS16105 (3342330) | 3342330..3343145 | - | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| JSW75_RS16110 (3343235) | 3343235..3344325 | + | 1091 | WP_085940648.1 | IS4-like element ISAba1 family transposase | - |
| JSW75_RS16115 (3344522) | 3344522..3345007 | - | 486 | WP_061456197.1 | phenol hydroxylase | - |
| JSW75_RS16125 (3345233) | 3345233..3346756 | - | 1524 | Protein_3142 | Tn3 family transposase | - |
| JSW75_RS16130 (3346818) | 3346818..3347570 | + | 753 | WP_000602738.1 | IS6 family transposase | - |
| JSW75_RS16135 (3347992) | 3347992..3349017 | - | 1026 | WP_000742814.1 | aminoglycoside O-phosphotransferase APH(4)-Ia | - |
| JSW75_RS16140 (3349246) | 3349246..3350022 | - | 777 | WP_001199192.1 | aminoglycoside N-acetyltransferase AAC(3)-IVa | - |
| JSW75_RS16145 (3350136) | 3350136..3350840 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| JSW75_RS16150 (3350984) | 3350984..3351538 | + | 555 | WP_063840321.1 | fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5 | - |
| JSW75_RS16155 (3351669) | 3351669..3352499 | + | 831 | WP_001334766.1 | oxacillin-hydrolyzing class D beta-lactamase OXA-1 | - |
| JSW75_RS16160 (3352637) | 3352637..3353269 | + | 633 | WP_000186237.1 | type B-3 chloramphenicol O-acetyltransferase CatB3 | - |
| JSW75_RS16165 (3353354) | 3353354..3353806 | + | 453 | WP_001749986.1 | NAD(+)--rifampin ADP-ribosyltransferase Arr-3 | - |
| JSW75_RS16170 (3354029) | 3354029..3354376 | + | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| JSW75_RS16175 (3354370) | 3354370..3355209 | + | 840 | WP_000259031.1 | sulfonamide-resistant dihydropteroate synthase Sul1 | - |
| JSW75_RS16180 (3355373) | 3355373..3356077 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| JSW75_RS16185 (3356273) | 3356273..3356665 | + | 393 | WP_000084745.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| JSW75_RS16190 (3356985) | 3356985..3357371 | - | 387 | WP_063102497.1 | bleomycin binding protein | - |
| JSW75_RS16195 (3357565) | 3357565..3358269 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| JSW75_RS16200 (3358357) | 3358357..3358560 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| JSW75_RS16205 (3358716) | 3358716..3359921 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| JSW75_RS16210 (3359932) | 3359932..3360024 | + | 93 | Protein_3159 | PadR family transcriptional regulator | - |
| JSW75_RS16215 (3360075) | 3360075..3360779 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| JSW75_RS16220 (3360832) | 3360832..3361629 | - | 798 | Protein_3161 | class 1 integron integrase IntI1 | - |
| JSW75_RS16225 (3361787) | 3361787..3362260 | + | 474 | WP_032084013.1 | trimethoprim-resistant dihydrofolate reductase DfrA32 | - |
| JSW75_RS16230 (3362453) | 3362453..3363673 | + | 1221 | WP_032084014.1 | EreA family erythromycin esterase | - |
| JSW75_RS16235 (3363769) | 3363769..3364595 | + | 827 | Protein_3164 | AadA family aminoglycoside 3''-O-nucleotidyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|