MGE detailed information
MGE type: Genomic_island MGE length: 9049 bp
Accession: NZ_CP069386 Location: 3201202..3210250 Organism: Escherichia coli strain XH1815 Replicon: chromosome
Accession: NZ_CP069386 Location: 3201202..3210250 Organism: Escherichia coli strain XH1815 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JSW75_RS15380 (3197786) | 3197786..3198706 | + | 921 | Protein_3000 | Rpn family recombination-promoting nuclease/putative transposase | - |
| JSW75_RS15385 (3198950) | 3198950..3200362 | - | 1413 | WP_000199300.1 | PLP-dependent aminotransferase family protein | - |
| JSW75_RS15390 (3200539) | 3200539..3200703 | + | 165 | WP_000394280.1 | DUF1127 domain-containing protein | - |
| JSW75_RS15395 (3201202) | 3201202..3202710 | + | 1509 | Protein_3003 | protein YjiT | - |
| JSW75_RS15400 (3202707) | 3202707..3205643 | + | 2937 | Protein_3004 | hypothetical protein | - |
| JSW75_RS15405 (3205700) | 3205700..3206746 | - | 1047 | WP_000437621.1 | 5-methylcytosine-specific restriction endonuclease system specificity protein McrC | - |
| JSW75_RS15410 (3206746) | 3206746..3208125 | - | 1380 | WP_072647343.1 | 5-methylcytosine-specific restriction endonuclease subunit McrB | - |
| JSW75_RS15415 (3208287) | 3208287..3208628 | - | 342 | WP_000132601.1 | endoribonuclease SymE | Toxin Detail |
| - (3208623) | 3208623..3208699 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (3208623) | 3208623..3208699 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (3208623) | 3208623..3208699 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (3208623) | 3208623..3208699 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (3208623) | 3208623..3208699 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (3208623) | 3208623..3208699 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (3208623) | 3208623..3208699 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (3208623) | 3208623..3208699 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| JSW75_RS15420 (3208856) | 3208856..3210250 | - | 1395 | WP_072647344.1 | type I restriction-modification system specificity subunit | - |
| JSW75_RS15425 (3210247) | 3210247..3211836 | - | 1590 | WP_001063204.1 | type I restriction-modification system methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20090 | HG738867 | 4458009..4467057 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA6352 | NC_000913 | 4572414..4581462 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21461 | NC_007779 | 4577094..4586142 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA6351 | NC_012759 | 4508921..4517969 | 0 | |
| Escherichia coli DH1 | Genomic island | TA27427 | NC_017638 | 4552192..4561240 | 0 | |
| Escherichia coli BW25113 | Genomic island | TA48706 | NZ_CP009273 | 4562231..4571279 | 0 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90501 | NZ_CP025520 | 3428612..3437660 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285035 | NZ_HG738867 | 4458009..4467057 | 0 |