MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 70477 bp
Accession: NZ_CP069372 Location: 1..70477 Organism: Neotabrizicola shimadae strain N10 Replicon: plasmid unnamed2
Accession: NZ_CP069372 Location: 1..70477 Organism: Neotabrizicola shimadae strain N10 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JO391_RS20835 (JO391_20815) | 1..1656 | + | 1656 | WP_220664789.1 | putative DNA binding domain-containing protein | - |
| JO391_RS20840 (JO391_20820) | 1718..4798 | + | 3081 | Protein_2 | DEAD/DEAH box helicase family protein | - |
| JO391_RS20845 (JO391_20825) | 4828..5490 | - | 663 | WP_220664790.1 | hypothetical protein | - |
| JO391_RS20850 (JO391_20830) | 5504..6124 | - | 621 | WP_105515940.1 | 7-cyano-7-deazaguanine synthase | - |
| JO391_RS20855 (JO391_20835) | 6121..7452 | - | 1332 | WP_220664791.1 | nucleoside 2-deoxyribosyltransferase | - |
| JO391_RS20860 (JO391_20840) | 8476..9408 | - | 933 | WP_220664792.1 | DUF2493 domain-containing protein | - |
| JO391_RS20865 (JO391_20845) | 9778..10809 | - | 1032 | WP_220664793.1 | toprim domain-containing protein | - |
| JO391_RS20870 (JO391_20850) | 10813..15174 | - | 4362 | WP_220664794.1 | bifunctional class I SAM-dependent methyltransferase/DEAD/DEAH box helicase | - |
| JO391_RS20875 (JO391_20855) | 15352..15648 | + | 297 | WP_220664795.1 | hypothetical protein | - |
| JO391_RS20880 (JO391_20860) | 15659..16303 | - | 645 | WP_220664796.1 | antitoxin of toxin-antitoxin stability system | - |
| JO391_RS20885 (JO391_20865) | 16296..16715 | - | 420 | WP_220664797.1 | hypothetical protein | - |
| JO391_RS20890 (JO391_20870) | 16792..16989 | - | 198 | WP_220664798.1 | hypothetical protein | - |
| JO391_RS20895 (JO391_20875) | 16991..17371 | - | 381 | WP_220664812.1 | hypothetical protein | - |
| JO391_RS20900 (JO391_20880) | 17368..18300 | - | 933 | WP_220664668.1 | IS110 family transposase | - |
| JO391_RS20905 (JO391_20885) | 18498..18989 | - | 492 | WP_220664799.1 | hypothetical protein | - |
| JO391_RS20910 (JO391_20890) | 19091..19604 | - | 514 | Protein_16 | DNA repair protein RadC | - |
| JO391_RS20915 (JO391_20895) | 19713..20156 | - | 444 | WP_220664800.1 | DNA repair protein RadC | - |
| JO391_RS20920 (JO391_20900) | 20282..21481 | - | 1200 | WP_220664801.1 | DUF932 domain-containing protein | - |
| JO391_RS20925 (JO391_20905) | 21785..22927 | + | 1143 | WP_259444942.1 | hypothetical protein | - |
| JO391_RS20930 (JO391_20910) | 23038..23442 | - | 405 | WP_090271194.1 | single-stranded DNA-binding protein | - |
| JO391_RS20935 (JO391_20915) | 23867..24187 | + | 321 | WP_220664802.1 | H-NS histone family protein | - |
| JO391_RS20940 (JO391_20920) | 24371..24559 | - | 189 | WP_220664803.1 | hypothetical protein | - |
| JO391_RS20945 (JO391_20925) | 24593..24988 | - | 396 | WP_220664804.1 | DUF6527 family protein | - |
| JO391_RS20950 (JO391_20930) | 24988..26409 | - | 1422 | WP_259444943.1 | ThiF family adenylyltransferase | - |
| JO391_RS20955 (JO391_20935) | 26394..26804 | - | 411 | WP_259444944.1 | E2/UBC family protein | - |
| JO391_RS20960 (JO391_20940) | 26812..27171 | - | 360 | WP_220664806.1 | multiubiquitin domain-containing protein | - |
| JO391_RS20965 (JO391_20945) | 27312..28400 | + | 1089 | WP_220664807.1 | XRE family transcriptional regulator | - |
| JO391_RS20970 (JO391_20950) | 28406..28906 | + | 501 | WP_220664808.1 | hypothetical protein | - |
| JO391_RS20975 (JO391_20955) | 29316..29480 | - | 165 | WP_018065899.1 | hypothetical protein | - |
| JO391_RS20980 (JO391_20960) | 29870..30343 | - | 474 | WP_220664809.1 | hypothetical protein | - |
| JO391_RS20985 (JO391_20965) | 30444..32615 | - | 2172 | WP_220664810.1 | ParB/RepB/Spo0J family partition protein | - |
| JO391_RS20990 (JO391_20970) | 32795..34006 | - | 1212 | WP_220664811.1 | plasmid replication protein RepC | - |
| JO391_RS20995 (JO391_20975) | 34189..35181 | - | 993 | WP_089258974.1 | plasmid partitioning protein RepB | - |
| JO391_RS21000 (JO391_20980) | 35181..36365 | - | 1185 | WP_113901404.1 | plasmid partitioning protein RepA | - |
| JO391_RS21005 (JO391_20985) | 36581..36808 | + | 228 | WP_123130489.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| JO391_RS21010 (JO391_20990) | 36798..37193 | + | 396 | WP_089258968.1 | PIN domain-containing protein | Toxin Detail |
| JO391_RS21015 (JO391_20995) | 37272..38156 | - | 885 | WP_220664771.1 | recombinase family protein | - |
| JO391_RS21020 (JO391_21000) | 38383..39453 | + | 1071 | WP_220664772.1 | hypothetical protein | - |
| JO391_RS21025 (JO391_21005) | 39465..40214 | - | 750 | WP_220664773.1 | CbtA family protein | - |
| JO391_RS21030 (JO391_21010) | 40233..40409 | - | 177 | WP_084450957.1 | CbtB domain-containing protein | - |
| JO391_RS21035 (JO391_21015) | 40686..41147 | - | 462 | WP_051294570.1 | Cu(I)-responsive transcriptional regulator | - |
| JO391_RS21040 (JO391_21020) | 41161..43638 | - | 2478 | WP_028030796.1 | heavy metal translocating P-type ATPase | - |
| JO391_RS21045 (JO391_21025) | 43807..43995 | + | 189 | WP_028030797.1 | heavy-metal-associated domain-containing protein | - |
| JO391_RS21050 (JO391_21030) | 44026..44442 | + | 417 | WP_028030798.1 | DUF305 domain-containing protein | - |
| JO391_RS21055 (JO391_21035) | 44693..46639 | + | 1947 | WP_035026285.1 | copper-translocating P-type ATPase | - |
| JO391_RS21060 (JO391_21040) | 46648..47232 | - | 585 | WP_028030800.1 | hypothetical protein | - |
| JO391_RS21065 (JO391_21045) | 47237..47998 | - | 762 | WP_189382349.1 | DsbA family protein | - |
| JO391_RS21070 (JO391_21050) | 48001..48564 | - | 564 | WP_028030801.1 | L,D-transpeptidase | - |
| JO391_RS21075 (JO391_21055) | 48588..48740 | + | 153 | WP_220664774.1 | hypothetical protein | - |
| JO391_RS21080 (JO391_21060) | 49086..49646 | + | 561 | WP_028030802.1 | L,D-transpeptidase | - |
| JO391_RS21085 (JO391_21065) | 49651..50025 | + | 375 | WP_220664775.1 | hypothetical protein | - |
| JO391_RS21090 (JO391_21070) | 50291..50836 | + | 546 | WP_259444945.1 | cytochrome c | - |
| JO391_RS21095 (JO391_21075) | 50839..51822 | + | 984 | WP_259444938.1 | cytochrome c | - |
| JO391_RS21100 (JO391_21080) | 51812..52240 | + | 429 | WP_220664777.1 | hypothetical protein | - |
| JO391_RS21105 (JO391_21085) | 52790..53461 | + | 672 | WP_259444939.1 | ferric reductase-like transmembrane domain-containing protein | - |
| JO391_RS21110 (JO391_21090) | 53448..55400 | + | 1953 | WP_220664779.1 | penicillin-binding protein 2 | - |
| JO391_RS21115 (JO391_21095) | 55397..55873 | + | 477 | WP_259444940.1 | cytochrome c | - |
| JO391_RS21120 (JO391_21100) | 55984..56709 | + | 726 | WP_220664780.1 | DsbA family protein | - |
| JO391_RS21125 (JO391_21105) | 56775..57362 | + | 588 | WP_220664781.1 | hypothetical protein | - |
| JO391_RS21130 (JO391_21110) | 57425..57892 | - | 468 | WP_220664782.1 | DUF411 domain-containing protein | - |
| JO391_RS21135 (JO391_21115) | 57991..58602 | - | 612 | WP_149143153.1 | hypothetical protein | - |
| JO391_RS21140 (JO391_21120) | 58790..59143 | + | 354 | WP_089258471.1 | hypothetical protein | - |
| JO391_RS21145 (JO391_21125) | 59210..60580 | + | 1371 | WP_220664783.1 | multicopper oxidase domain-containing protein | - |
| JO391_RS21150 (JO391_21130) | 60567..61277 | + | 711 | WP_220664784.1 | IS6 family transposase | - |
| JO391_RS21155 (JO391_21135) | 61340..61819 | + | 480 | WP_220664785.1 | hypothetical protein | - |
| JO391_RS21160 (JO391_21140) | 61859..62323 | - | 465 | WP_126976286.1 | hypothetical protein | - |
| JO391_RS21165 (JO391_21145) | 62409..62618 | + | 210 | WP_126976287.1 | hypothetical protein | - |
| JO391_RS21170 (JO391_21150) | 62661..62975 | + | 315 | WP_112312860.1 | WGR domain-containing protein | - |
| JO391_RS21175 (JO391_21155) | 62982..63344 | - | 363 | WP_112312858.1 | polymer-forming cytoskeletal protein | - |
| JO391_RS21180 (JO391_21160) | 63616..63909 | + | 294 | WP_255469725.1 | hypothetical protein | - |
| JO391_RS21185 (JO391_21165) | 63909..64241 | + | 333 | WP_140847785.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JO391_RS21190 (JO391_21170) | 64580..67840 | + | 3261 | WP_220664786.1 | helicase-related protein | - |
| JO391_RS21195 (JO391_21175) | 67837..68499 | + | 663 | WP_220664787.1 | DUF4391 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|