MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 119227 bp
Accession: NZ_CP069371 Location: 1..119227 Organism: Neotabrizicola shimadae strain N10 Replicon: plasmid unnamed1
Accession: NZ_CP069371 Location: 1..119227 Organism: Neotabrizicola shimadae strain N10 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JO391_RS20180 (JO391_20160) | 1..972 | + | 972 | WP_220664701.1 | substrate-binding domain-containing protein | - |
| JO391_RS20185 (JO391_20165) | 1067..2065 | + | 999 | WP_220664702.1 | ABC transporter permease | - |
| JO391_RS20190 (JO391_20170) | 2065..2892 | + | 828 | WP_220664703.1 | ATP-binding cassette domain-containing protein | - |
| JO391_RS20195 (JO391_20175) | 3020..3328 | + | 309 | WP_220664704.1 | MocE family 2Fe-2S type ferredoxin | - |
| JO391_RS20200 (JO391_20180) | 3335..4114 | + | 780 | WP_220664705.1 | TIM barrel protein | - |
| JO391_RS20205 (JO391_20185) | 4118..5299 | + | 1182 | WP_220664706.1 | FAD-dependent oxidoreductase | - |
| JO391_RS20210 (JO391_20190) | 5316..6137 | + | 822 | WP_220664707.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | - |
| JO391_RS20215 (JO391_20195) | 6142..7014 | + | 873 | WP_220664708.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| JO391_RS20220 (JO391_20200) | 7029..7925 | + | 897 | WP_220664709.1 | formyltetrahydrofolate deformylase | - |
| JO391_RS20225 (JO391_20205) | 8077..9078 | + | 1002 | WP_220664710.1 | inositol 2-dehydrogenase | - |
| JO391_RS20230 (JO391_20210) | 9176..10150 | - | 975 | WP_220664711.1 | Type IV secretion system protein VirB11 | VF |
| JO391_RS20235 (JO391_20215) | 10150..11472 | - | 1323 | WP_220664712.1 | Type IV secretion system protein PtlG | VF |
| JO391_RS20240 (JO391_20220) | 11474..12223 | - | 750 | WP_220664713.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| JO391_RS20245 (JO391_20225) | 12220..12879 | - | 660 | WP_220664714.1 | Type IV secretion system protein PtlE | VF |
| JO391_RS20250 (JO391_20230) | 12912..13931 | - | 1020 | WP_220664715.1 | type IV secretion system protein | - |
| JO391_RS20255 (JO391_20235) | 13935..14441 | - | 507 | WP_220664716.1 | hypothetical protein | - |
| JO391_RS20260 (JO391_20240) | 14438..15235 | - | 798 | WP_220664717.1 | type IV secretion system protein | - |
| JO391_RS20265 (JO391_20245) | 15225..16334 | - | 1110 | WP_220664718.1 | lytic transglycosylase domain-containing protein | - |
| JO391_RS20270 (JO391_20250) | 16343..16549 | - | 207 | WP_220664719.1 | hypothetical protein | - |
| JO391_RS20275 (JO391_20255) | 16546..18924 | - | 2379 | WP_220664720.1 | type IV secretion system protein B4 | - |
| JO391_RS20280 (JO391_20260) | 18914..19189 | - | 276 | WP_220664721.1 | VirB3 family type IV secretion system protein | - |
| JO391_RS20285 (JO391_20265) | 19256..19570 | - | 315 | WP_220664722.1 | TrbC/VirB2 family protein | - |
| JO391_RS20290 (JO391_20270) | 19576..20166 | - | 591 | WP_259444933.1 | lytic transglycosylase domain-containing protein | - |
| JO391_RS20295 (JO391_20275) | 20258..20578 | - | 321 | WP_101922833.1 | hypothetical protein | - |
| JO391_RS20300 (JO391_20280) | 20790..21050 | + | 261 | WP_220664724.1 | hypothetical protein | - |
| JO391_RS20305 (JO391_20285) | 21111..21755 | + | 645 | WP_220664725.1 | hypothetical protein | - |
| JO391_RS20310 (JO391_20290) | 21972..22817 | + | 846 | WP_220664726.1 | hypothetical protein | - |
| JO391_RS20315 (JO391_20295) | 23027..23329 | + | 303 | WP_220664727.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| JO391_RS20320 (JO391_20300) | 23385..24752 | + | 1368 | WP_220664728.1 | NAD(P)-binding domain-containing protein | - |
| JO391_RS20325 (JO391_20305) | 24743..25903 | + | 1161 | WP_220664729.1 | MFS transporter | - |
| JO391_RS20330 (JO391_20310) | 25890..27161 | - | 1272 | WP_259444934.1 | organoarsenical effux MFS transporter ArsJ | - |
| JO391_RS20335 (JO391_20315) | 27158..28165 | - | 1008 | WP_220664731.1 | ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase | - |
| JO391_RS20340 (JO391_20320) | 28171..29025 | - | 855 | WP_220664732.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| JO391_RS20345 (JO391_20325) | 29166..29441 | + | 276 | WP_220664733.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| JO391_RS20350 (JO391_20330) | 29438..30436 | + | 999 | WP_220664734.1 | permease | - |
| JO391_RS20355 (JO391_20335) | 30448..30675 | + | 228 | WP_220664735.1 | thioredoxin family protein | - |
| JO391_RS20360 (JO391_20340) | 30672..31076 | + | 405 | WP_220664736.1 | OsmC family protein | - |
| JO391_RS20365 (JO391_20345) | 31081..31776 | + | 696 | WP_220664737.1 | cation diffusion facilitator family transporter | - |
| JO391_RS20370 (JO391_20350) | 31828..32978 | + | 1151 | Protein_38 | IS3 family transposase ISMch1 | Transposase |
| JO391_RS20375 (JO391_20355) | 33041..33247 | + | 207 | WP_220664738.1 | hypothetical protein | - |
| JO391_RS20380 (JO391_20360) | 33303..33845 | - | 543 | WP_220664739.1 | Crp/Fnr family transcriptional regulator | - |
| JO391_RS20385 (JO391_20365) | 33904..34506 | + | 603 | WP_259444935.1 | hypothetical protein | - |
| JO391_RS20390 (JO391_20370) | 34518..35234 | - | 717 | WP_220664740.1 | arsenical resistance protein ArsH | - |
| JO391_RS20395 (JO391_20375) | 35231..36250 | - | 1020 | WP_220664741.1 | ACR3 family arsenite efflux transporter | - |
| JO391_RS20400 (JO391_20380) | 36247..36570 | - | 324 | WP_220664764.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| JO391_RS20405 (JO391_20385) | 36704..37564 | + | 861 | WP_220664742.1 | PhnD/SsuA/transferrin family substrate-binding protein | - |
| JO391_RS20410 (JO391_20390) | 37618..38988 | + | 1371 | WP_259444936.1 | Sensor protein ZraS | VF |
| JO391_RS20415 (JO391_20395) | 38981..40189 | + | 1209 | WP_220664744.1 | response regulator | - |
| JO391_RS20420 (JO391_20400) | 40361..40888 | + | 528 | WP_220664745.1 | arsenate reductase (azurin) small subunit | - |
| JO391_RS20425 (JO391_20405) | 40899..43358 | + | 2460 | WP_220664746.1 | arsenate reductase (azurin) large subunit | - |
| JO391_RS20430 (JO391_20410) | 43429..43941 | + | 513 | WP_220664747.1 | DUF2478 domain-containing protein | - |
| JO391_RS21645 | 43919..44204 | - | 286 | Protein_51 | helix-turn-helix domain-containing protein | - |
| JO391_RS20435 (JO391_20415) | 44399..44515 | - | 117 | WP_220664748.1 | DUF2474 family protein | - |
| JO391_RS20440 (JO391_20420) | 44515..45519 | - | 1005 | WP_220664749.1 | cytochrome d ubiquinol oxidase subunit II | - |
| JO391_RS20445 (JO391_20425) | 45516..46949 | - | 1434 | WP_220664750.1 | cytochrome ubiquinol oxidase subunit I | - |
| JO391_RS20450 (JO391_20430) | 47007..47633 | - | 627 | WP_220664751.1 | peroxiredoxin | - |
| JO391_RS20455 (JO391_20435) | 47877..48326 | + | 450 | WP_220664752.1 | Rrf2 family transcriptional regulator | - |
| JO391_RS20460 (JO391_20440) | 48305..48628 | - | 324 | WP_220664753.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| JO391_RS20465 (JO391_20445) | 48691..48915 | + | 225 | WP_220664754.1 | DUF2892 domain-containing protein | - |
| JO391_RS20470 (JO391_20450) | 49019..49504 | + | 486 | WP_259444937.1 | hypothetical protein | - |
| JO391_RS20475 (JO391_20455) | 49555..49977 | + | 423 | WP_220664766.1 | YeeE/YedE thiosulfate transporter family protein | - |
| JO391_RS20480 (JO391_20460) | 49982..50416 | + | 435 | WP_220664755.1 | YeeE/YedE family protein | - |
| JO391_RS20485 (JO391_20465) | 50454..51356 | + | 903 | WP_220664756.1 | MBL fold metallo-hydrolase | - |
| JO391_RS20490 (JO391_20470) | 51399..51740 | + | 342 | WP_220664757.1 | TIGR01244 family sulfur transferase | - |
| JO391_RS20495 (JO391_20475) | 51781..53460 | + | 1680 | WP_220664758.1 | bifunctional protein tyrosine phosphatase family protein/NAD(P)/FAD-dependent oxidoreductase | - |
| JO391_RS20500 (JO391_20480) | 53480..55297 | + | 1818 | WP_220664759.1 | sulfate permease | - |
| JO391_RS20505 (JO391_20485) | 55371..55967 | + | 597 | WP_220664760.1 | class I SAM-dependent methyltransferase | - |
| JO391_RS20510 (JO391_20490) | 56024..56371 | + | 348 | WP_220664761.1 | rhodanese-like domain-containing protein | - |
| JO391_RS20515 (JO391_20495) | 56498..57571 | - | 1074 | WP_220664767.1 | hypothetical protein | - |
| JO391_RS20520 (JO391_20500) | 57798..58682 | + | 885 | WP_018065891.1 | Tn3 family transposase ISPsy42 | Transposase |
| JO391_RS20525 (JO391_20505) | 58761..59156 | - | 396 | WP_018065892.1 | PIN domain-containing protein | Toxin Detail |
| JO391_RS20530 (JO391_20510) | 59146..59373 | - | 228 | WP_018065893.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| JO391_RS20535 (JO391_20515) | 59583..60776 | + | 1194 | WP_220664762.1 | Sporulation initiation inhibitor protein Soj | VF |
| JO391_RS20540 (JO391_20520) | 60790..61692 | + | 903 | WP_259444929.1 | plasmid partitioning protein RepB | - |
| JO391_RS20545 (JO391_20525) | 61905..63116 | + | 1212 | WP_220664650.1 | plasmid replication protein RepC | - |
| JO391_RS20550 (JO391_20530) | 63286..65457 | + | 2172 | WP_220664768.1 | ParB/RepB/Spo0J family partition protein | - |
| JO391_RS21650 | 65558..65743 | + | 186 | Protein_76 | hypothetical protein | - |
| JO391_RS20555 (JO391_20535) | 65913..67451 | + | 1539 | WP_220660780.1 | IS21 family transposase ISFK1 | Transposase |
| JO391_RS20560 (JO391_20540) | 67466..68230 | + | 765 | WP_220660781.1 | IS21-like element helper ATPase IstB | - |
| JO391_RS20565 (JO391_20545) | 68335..68646 | + | 312 | WP_259444930.1 | hypothetical protein | - |
| JO391_RS20570 (JO391_20550) | 69035..69199 | + | 165 | WP_220664651.1 | hypothetical protein | - |
| JO391_RS20575 (JO391_20555) | 69347..70441 | - | 1095 | WP_220664652.1 | Fic/DOC family N-terminal domain-containing protein | - |
| JO391_RS20580 (JO391_20560) | 70559..70876 | - | 318 | WP_220664653.1 | H-NS histone family protein | - |
| JO391_RS20585 (JO391_20565) | 71302..71706 | + | 405 | WP_220664654.1 | single-stranded DNA-binding protein | - |
| JO391_RS20590 (JO391_20570) | 71848..72390 | + | 543 | WP_220664655.1 | hypothetical protein | - |
| JO391_RS20595 (JO391_20575) | 72406..72603 | + | 198 | WP_220664656.1 | DUF1127 domain-containing protein | - |
| JO391_RS20600 (JO391_20580) | 72640..73845 | + | 1206 | WP_220664657.1 | MFS transporter | - |
| JO391_RS20605 (JO391_20585) | 73851..74177 | - | 327 | WP_220664658.1 | YnfA family protein | - |
| JO391_RS20610 (JO391_20590) | 74222..75019 | - | 798 | WP_220664659.1 | sulfite exporter TauE/SafE family protein | - |
| JO391_RS20615 (JO391_20595) | 75137..76093 | + | 957 | WP_220664660.1 | magnesium/cobalt transporter CorA | - |
| JO391_RS20620 (JO391_20600) | 76066..76245 | - | 180 | WP_259444931.1 | TOBE domain-containing protein | - |
| JO391_RS20625 (JO391_20605) | 76467..77330 | - | 864 | WP_220664662.1 | universal stress protein | - |
| JO391_RS20630 (JO391_20610) | 77343..78833 | - | 1491 | WP_220664663.1 | SulP family inorganic anion transporter | - |
| JO391_RS20635 (JO391_20615) | 79166..80365 | + | 1200 | WP_220664664.1 | DUF932 domain-containing protein | - |
| JO391_RS20640 (JO391_20620) | 80490..80930 | + | 441 | WP_220664665.1 | DNA repair protein RadC | - |
| JO391_RS20645 (JO391_20625) | 81041..81559 | + | 519 | WP_220664666.1 | DNA repair protein RadC | - |
| JO391_RS20650 (JO391_20630) | 81661..82152 | + | 492 | WP_220664667.1 | hypothetical protein | - |
| JO391_RS20655 (JO391_20635) | 82350..83282 | + | 933 | WP_220664668.1 | IS110 family transposase ISHne4 | Transposase |
| JO391_RS20660 (JO391_20640) | 83279..83659 | + | 381 | WP_220664769.1 | hypothetical protein | - |
| JO391_RS20665 (JO391_20645) | 83661..83858 | + | 198 | WP_220664669.1 | hypothetical protein | - |
| JO391_RS20670 (JO391_20650) | 83933..84352 | + | 420 | WP_220664670.1 | hypothetical protein | - |
| JO391_RS20675 (JO391_20655) | 84345..84989 | + | 645 | WP_220664671.1 | antitoxin of toxin-antitoxin stability system | - |
| JO391_RS20680 (JO391_20660) | 85047..85640 | + | 594 | WP_220664672.1 | DUF6088 family protein | - |
| JO391_RS20685 (JO391_20665) | 85757..86674 | - | 918 | WP_220664673.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| JO391_RS20690 (JO391_20670) | 86664..87485 | - | 822 | WP_220664674.1 | type IV toxin-antitoxin system AbiEi family antitoxin | - |
| JO391_RS20695 (JO391_20675) | 87860..88156 | - | 297 | WP_220664675.1 | hypothetical protein | - |
| JO391_RS20700 (JO391_20680) | 88334..92695 | + | 4362 | WP_220664676.1 | strawberry notch family protein | - |
| JO391_RS20705 (JO391_20685) | 92707..93738 | + | 1032 | WP_220664677.1 | toprim domain-containing protein | - |
| JO391_RS20710 (JO391_20690) | 94102..95037 | + | 936 | WP_220664678.1 | DUF2493 domain-containing protein | - |
| JO391_RS20715 (JO391_20695) | 95122..95370 | + | 249 | WP_220664679.1 | WGR domain-containing protein | - |
| JO391_RS20720 (JO391_20700) | 95401..96117 | - | 717 | WP_220664680.1 | SprT family zinc-dependent metalloprotease | - |
| JO391_RS20725 (JO391_20705) | 96114..99329 | - | 3216 | WP_220664681.1 | HsdR family type I site-specific deoxyribonuclease | - |
| JO391_RS20730 (JO391_20710) | 99326..100174 | - | 849 | WP_220664682.1 | HAD family hydrolase | - |
| JO391_RS20735 (JO391_20715) | 100167..101630 | - | 1464 | WP_220664683.1 | DUF4263 domain-containing protein | - |
| JO391_RS20740 (JO391_20720) | 101630..102724 | - | 1095 | WP_220664684.1 | restriction endonuclease subunit S | - |
| JO391_RS20745 (JO391_20725) | 102834..103859 | - | 1026 | WP_220664685.1 | virulence RhuM family protein | - |
| JO391_RS20750 (JO391_20730) | 103852..105369 | - | 1518 | WP_220664686.1 | type I restriction-modification system subunit M | - |
| JO391_RS20755 (JO391_20735) | 105366..105971 | - | 606 | WP_220664687.1 | restriction endonuclease subunit S | - |
| JO391_RS20760 (JO391_20740) | 106129..107178 | - | 1050 | WP_220664688.1 | Fic family protein | - |
| JO391_RS20765 (JO391_20745) | 107328..107531 | - | 204 | WP_220664689.1 | hypothetical protein | - |
| JO391_RS20770 (JO391_20750) | 107796..108158 | + | 363 | WP_220664690.1 | polymer-forming cytoskeletal protein | - |
| JO391_RS20775 (JO391_20755) | 108165..108425 | - | 261 | WP_259444932.1 | WGR domain-containing protein | - |
| JO391_RS20780 (JO391_20760) | 108522..108731 | - | 210 | WP_220664691.1 | hypothetical protein | - |
| JO391_RS20785 (JO391_20765) | 108817..109281 | + | 465 | WP_220664692.1 | hypothetical protein | - |
| JO391_RS20790 (JO391_20770) | 109321..109995 | - | 675 | WP_220664693.1 | hypothetical protein | - |
| JO391_RS20795 (JO391_20775) | 109992..110756 | - | 765 | WP_220664694.1 | ParA family protein | - |
| JO391_RS20800 (JO391_20780) | 111815..112288 | + | 474 | WP_220664695.1 | hypothetical protein | Relaxase |
| JO391_RS20805 (JO391_20785) | 112285..114162 | + | 1878 | WP_220664696.1 | T-DNA border endonuclease VirD2 | Relaxase |
| JO391_RS20810 (JO391_20790) | 114173..116050 | + | 1878 | WP_220664697.1 | Protein VirD4 | VF |
| JO391_RS20815 (JO391_20795) | 116129..117127 | + | 999 | WP_220664698.1 | LacI family DNA-binding transcriptional regulator | - |
| JO391_RS20820 (JO391_20800) | 117308..118099 | + | 792 | WP_220664699.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | - |
| JO391_RS20825 (JO391_20805) | 118111..119136 | + | 1026 | WP_220664700.1 | sterol desaturase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|