MGE detailed information
MGE type: Genomic_island MGE length: 39492 bp
Accession: NZ_CP069278 Location: 42857..82348 Organism: Bifidobacterium longum strain HN001 Replicon: chromosome
Accession: NZ_CP069278 Location: 42857..82348 Organism: Bifidobacterium longum strain HN001 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JQN89_RS00185 () | 38032..38451 | + | 420 | WP_007052224.1 | aspartate carbamoyltransferase regulatory subunit | - |
| JQN89_RS00190 () | 38448..39944 | + | 1497 | WP_007054219.1 | amidohydrolase family protein | - |
| JQN89_RS00195 () | 39962..40914 | + | 953 | Protein_38 | orotidine-5'-phosphate decarboxylase | - |
| JQN89_RS00200 () | 41050..41874 | + | 825 | WP_007052227.1 | dihydroorotate dehydrogenase electron transfer subunit | - |
| JQN89_RS00205 () | 41877..42848 | + | 972 | WP_007052228.1 | dihydroorotate dehydrogenase | - |
| JQN89_RS00210 () | 42857..43552 | + | 696 | WP_203385425.1 | orotate phosphoribosyltransferase | - |
| JQN89_RS00215 () | 43661..43813 | + | 153 | WP_203385426.1 | hypothetical protein | - |
| JQN89_RS00220 () | 44028..45149 | + | 1122 | WP_013410900.1 | DUF2974 domain-containing protein | - |
| JQN89_RS00225 () | 45304..46227 | - | 924 | WP_203385427.1 | Hca operon transcriptional activator HcaR | VF |
| JQN89_RS00230 () | 46329..46958 | - | 630 | WP_065445613.1 | HAD family phosphatase | - |
| JQN89_RS00235 () | 47060..48823 | - | 1764 | WP_007052234.1 | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | - |
| JQN89_RS00240 () | 48863..50053 | - | 1191 | WP_007052235.1 | pyridoxal phosphate-dependent aminotransferase | - |
| JQN89_RS00245 () | 50442..51713 | + | 1272 | WP_203385428.1 | IS30 family transposase ISBlo4 | Transposase |
| JQN89_RS00250 () | 52281..53120 | + | 840 | WP_152596664.1 | RNA helicase | - |
| JQN89_RS00255 () | 53129..53470 | - | 342 | WP_007052237.1 | DUF488 domain-containing protein | - |
| JQN89_RS00260 () | 53582..53893 | - | 312 | WP_008783472.1 | hypothetical protein | - |
| JQN89_RS00265 () | 53978..54118 | - | 141 | WP_013140710.1 | hypothetical protein | - |
| JQN89_RS00270 () | 54093..54939 | - | 847 | Protein_53 | virulence protein RhuM/Fic/DOC family protein | - |
| JQN89_RS00275 () | 55195..55818 | + | 624 | WP_080504093.1 | thiamine biosynthesis protein ThiJ | - |
| JQN89_RS00280 () | 55792..56235 | - | 444 | WP_080504092.1 | putative ABC transporter ATP-binding protein YxlF | VF |
| JQN89_RS00285 () | 56241..56541 | + | 301 | Protein_56 | DUF1287 domain-containing protein | - |
| JQN89_RS00290 () | 56549..57574 | - | 1026 | WP_203385429.1 | hypothetical protein | - |
| JQN89_RS00295 () | 57760..57960 | + | 201 | WP_013582563.1 | hypothetical protein | - |
| JQN89_RS00300 () | 58033..58461 | + | 429 | WP_013140715.1 | hypothetical protein | - |
| JQN89_RS00305 () | 58541..59191 | + | 651 | WP_140514671.1 | signal peptidase I | - |
| JQN89_RS00310 () | 59395..60969 | - | 1575 | WP_203385430.1 | amino acid permease | - |
| JQN89_RS00315 () | 61290..61922 | - | 633 | WP_162501692.1 | MFS transporter | - |
| JQN89_RS00320 () | 61954..62109 | - | 156 | WP_007056283.1 | hypothetical protein | - |
| JQN89_RS00325 () | 62117..62338 | + | 222 | WP_203385597.1 | YidC/Oxa1 family membrane protein insertase | - |
| JQN89_RS00330 () | 62338..63012 | + | 675 | WP_203385598.1 | YidC/Oxa1 family membrane protein insertase | - |
| JQN89_RS00335 () | 63114..63734 | + | 621 | WP_007054239.1 | NUDIX hydrolase | - |
| JQN89_RS00340 () | 63763..64086 | + | 324 | WP_012471871.1 | amidohydrolase | - |
| JQN89_RS00345 () | 64736..65029 | - | 294 | WP_012471870.1 | hypothetical protein | - |
| JQN89_RS00350 () | 65122..65763 | - | 642 | WP_007056262.1 | hypothetical protein | - |
| JQN89_RS00355 () | 65977..66156 | + | 180 | WP_007056286.1 | antitoxin VbhA family protein | - |
| JQN89_RS00360 () | 66153..66737 | + | 585 | WP_007056278.1 | putative adenosine monophosphate-protein transferase fic | VF |
| JQN89_RS00365 () | 66940..67224 | - | 285 | WP_007056282.1 | hypothetical protein | - |
| JQN89_RS00370 () | 67241..67576 | - | 336 | WP_007056255.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| JQN89_RS00375 () | 67580..67849 | - | 270 | WP_007056990.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| JQN89_RS00380 () | 68034..69203 | - | 1170 | WP_007056274.1 | ABC transporter permease | - |
| JQN89_RS00385 () | 69200..69845 | - | 646 | Protein_76 | putative ABC transporter ATP-binding protein YknY | VF |
| JQN89_RS00390 () | 69842..70732 | - | 891 | WP_007056280.1 | hypothetical protein | - |
| JQN89_RS00395 () | 70729..71244 | - | 516 | WP_032685213.1 | hypothetical protein | - |
| JQN89_RS00400 () | 71370..72065 | + | 696 | WP_003829410.1 | response regulator transcription factor | - |
| JQN89_RS00405 () | 72131..73204 | + | 1074 | WP_007056270.1 | histidine kinase | - |
| JQN89_RS00410 () | 73605..73973 | - | 369 | WP_117701598.1 | response regulator | - |
| JQN89_RS00415 () | 74148..75426 | - | 1279 | Protein_82 | IS256 family transposase ISBlo8 | Transposase |
| JQN89_RS00420 () | 76130..76384 | + | 255 | WP_003829406.1 | hypothetical protein | - |
| JQN89_RS00425 () | 76548..77354 | + | 807 | WP_011068121.1 | Abi family protein | - |
| JQN89_RS00430 () | 77763..78093 | + | 331 | Protein_85 | hypothetical protein | - |
| JQN89_RS00435 () | 78229..78762 | + | 534 | WP_203385431.1 | GNAT family N-acetyltransferase | - |
| JQN89_RS00440 () | 78803..78985 | - | 183 | WP_008783722.1 | DUF2316 family protein | - |
| JQN89_RS00445 () | 79143..79658 | - | 516 | WP_007057098.1 | GNAT family N-acetyltransferase | - |
| JQN89_RS00450 () | 79838..80296 | + | 459 | WP_007054250.1 | ASCH domain-containing protein | - |
| JQN89_RS00455 () | 80358..80680 | + | 323 | Protein_90 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| JQN89_RS00460 () | 80745..80984 | + | 240 | WP_007057101.1 | hypothetical protein | - |
| JQN89_RS00465 () | 81335..82348 | + | 1014 | WP_165501560.1 | VanZ family protein | - |
| JQN89_RS00470 () | 82557..83460 | - | 904 | Protein_93 | amino acid permease | - |
| JQN89_RS00475 () | 83584..84435 | + | 852 | WP_007057111.1 | deoxyribonuclease IV | - |
| JQN89_RS00480 () | 84962..87049 | + | 2088 | WP_058060792.1 | bifunctional indole-3-glycerol phosphate synthase/tryptophan synthase subunit beta | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|