MGE detailed information
MGE type: Prophage MGE length: 54040 bp
Accession: NZ_CP069219 Location: 765877..819916 Organism: Staphylococcus epidermidis strain Z0118SE0272 Replicon: chromosome
Accession: NZ_CP069219 Location: 765877..819916 Organism: Staphylococcus epidermidis strain Z0118SE0272 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JQC90_RS03410 () | 762142..762789 | + | 648 | WP_001829774.1 | adenylate kinase | - |
| JQC90_RS03415 () | 762977..763195 | + | 219 | WP_001829792.1 | translation initiation factor IF-1 | - |
| JQC90_RS03420 () | 763227..763340 | + | 114 | WP_001829709.1 | 50S ribosomal protein L36 | - |
| JQC90_RS03425 () | 763363..763728 | + | 366 | WP_001829703.1 | 30S ribosomal protein S13 | - |
| JQC90_RS03430 () | 763751..764140 | + | 390 | WP_001829725.1 | 30S ribosomal protein S11 | - |
| JQC90_RS03435 () | 764217..765161 | + | 945 | WP_001829787.1 | DNA-directed RNA polymerase subunit alpha | - |
| JQC90_RS03440 () | 765178..765546 | + | 369 | WP_001829718.1 | 50S ribosomal protein L17 | - |
| JQC90_RS03445 () | 765877..766686 | + | 810 | WP_001829728.1 | Energy-coupling factor transporter ATP-binding protein EcfA1 | VF |
| JQC90_RS03450 () | 766683..767543 | + | 861 | WP_001829765.1 | energy-coupling factor transporter ATPase | - |
| JQC90_RS03455 () | 767533..768339 | + | 807 | WP_001829702.1 | energy-coupling factor transporter transmembrane protein EcfT | - |
| JQC90_RS03460 () | 768343..769146 | + | 804 | WP_001829771.1 | tRNA pseudouridine(38-40) synthase TruA | - |
| JQC90_RS03465 () | 769407..769844 | + | 438 | WP_001829751.1 | 50S ribosomal protein L13 | - |
| JQC90_RS03470 () | 769858..770256 | + | 399 | WP_095694446.1 | 30S ribosomal protein S9 | - |
| JQC90_RS03475 () | 770519..771259 | - | 741 | WP_001829706.1 | NAD-dependent protein deacylase | - |
| JQC90_RS03480 () | 771559..772314 | + | 756 | WP_001829761.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| JQC90_RS03485 () | 772685..773113 | + | 429 | WP_001829760.1 | galactose-6-phosphate isomerase subunit LacA | - |
| JQC90_RS03490 () | 773128..773643 | + | 516 | WP_001829777.1 | galactose-6-phosphate isomerase subunit LacB | - |
| JQC90_RS03495 () | 773656..774588 | + | 933 | WP_001829786.1 | tagatose-6-phosphate kinase | - |
| JQC90_RS03500 () | 774592..775569 | + | 978 | WP_001829784.1 | tagatose-bisphosphate aldolase | - |
| JQC90_RS03505 () | 775589..775903 | + | 315 | WP_001829758.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| JQC90_RS03510 () | 775909..776796 | + | 888 | Protein_698 | PTS transporter subunit EIIC | - |
| JQC90_RS03515 () | 776809..778200 | - | 1392 | WP_203267729.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| JQC90_RS03520 () | 778259..778882 | - | 624 | WP_203267730.1 | hypothetical protein | - |
| JQC90_RS03525 () | 778884..779408 | - | 525 | WP_002502889.1 | hypothetical protein | - |
| JQC90_RS03530 () | 779412..779864 | - | 453 | WP_203267731.1 | ImmA/IrrE family metallo-endopeptidase | Toxin Detail |
| JQC90_RS03535 () | 779877..780188 | - | 312 | WP_053091513.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| JQC90_RS03540 () | 780357..780575 | + | 219 | WP_047499919.1 | hypothetical protein | - |
| JQC90_RS03545 () | 780614..781060 | + | 447 | WP_203267732.1 | hypothetical protein | - |
| JQC90_RS03550 () | 781073..781249 | + | 177 | WP_176293859.1 | hypothetical protein | - |
| JQC90_RS03555 () | 781293..782066 | + | 774 | WP_203267733.1 | phage antirepressor KilAC domain-containing protein | - |
| JQC90_RS03560 () | 782108..782341 | + | 234 | WP_203267734.1 | DUF2829 domain-containing protein | - |
| JQC90_RS03565 () | 782551..782691 | + | 141 | WP_203267735.1 | hypothetical protein | - |
| JQC90_RS03570 () | 782783..782956 | + | 174 | WP_203267736.1 | DUF1270 family protein | - |
| JQC90_RS03575 () | 782959..783255 | + | 297 | WP_203267737.1 | XRE family transcriptional regulator | - |
| JQC90_RS03580 () | 783329..783604 | + | 276 | WP_203267738.1 | chordopoxvirus fusion protein | - |
| JQC90_RS03585 () | 783576..783803 | + | 228 | WP_203267739.1 | DUF2483 family protein | - |
| JQC90_RS03590 () | 783796..784416 | + | 621 | WP_203267740.1 | DUF1071 domain-containing protein | - |
| JQC90_RS03595 () | 784416..784844 | + | 429 | WP_203077590.1 | single-stranded DNA-binding protein | - |
| JQC90_RS03600 () | 784858..785532 | + | 675 | WP_203267741.1 | hypothetical protein | - |
| JQC90_RS03605 () | 785529..786230 | + | 702 | WP_203267742.1 | helix-turn-helix domain-containing protein | - |
| JQC90_RS03610 () | 786236..786589 | + | 354 | WP_002456374.1 | hypothetical protein | - |
| JQC90_RS03615 () | 786579..787826 | + | 1248 | WP_203267743.1 | AAA family ATPase | - |
| JQC90_RS03620 () | 788022..788267 | + | 246 | WP_002456877.1 | hypothetical protein | - |
| JQC90_RS03625 () | 788277..788684 | + | 408 | WP_203267744.1 | RusA family crossover junction endodeoxyribonuclease | - |
| JQC90_RS03630 () | 788685..788882 | + | 198 | WP_203267745.1 | transcriptional regulator | - |
| JQC90_RS03635 () | 788883..789242 | + | 360 | WP_203267746.1 | hypothetical protein | - |
| JQC90_RS03640 () | 789239..789706 | + | 468 | WP_203267747.1 | DUF3310 domain-containing protein | - |
| JQC90_RS03645 () | 789709..790389 | + | 681 | WP_203267748.1 | hypothetical protein | - |
| JQC90_RS03650 () | 790386..790586 | + | 201 | WP_061827616.1 | hypothetical protein | - |
| JQC90_RS03655 () | 790570..790896 | + | 327 | WP_162152505.1 | hypothetical protein | - |
| JQC90_RS03660 () | 790886..791119 | + | 234 | WP_203267749.1 | hypothetical protein | - |
| JQC90_RS03665 () | 791106..791285 | + | 180 | WP_063278474.1 | hypothetical protein | - |
| JQC90_RS03670 () | 791306..791575 | + | 270 | WP_203267750.1 | hypothetical protein | - |
| JQC90_RS03675 () | 791576..792001 | + | 426 | WP_203267751.1 | dUTP diphosphatase | - |
| JQC90_RS03680 () | 792047..792346 | + | 300 | WP_203267781.1 | hypothetical protein | - |
| JQC90_RS03685 () | 792352..792504 | + | 153 | WP_203267752.1 | hypothetical protein | - |
| JQC90_RS03690 () | 792497..792673 | + | 177 | WP_203267753.1 | transcriptional regulator | - |
| JQC90_RS03695 () | 792749..792970 | + | 222 | WP_099816437.1 | hypothetical protein | - |
| JQC90_RS03700 () | 792989..793405 | + | 417 | WP_099816436.1 | transcriptional regulator | - |
| JQC90_RS03705 () | 793612..794433 | + | 822 | WP_203267754.1 | hypothetical protein | - |
| JQC90_RS03710 () | 794501..794938 | + | 438 | WP_029625721.1 | terminase small subunit | - |
| JQC90_RS03715 () | 794925..796205 | + | 1281 | WP_203267755.1 | PBSX family phage terminase large subunit | - |
| JQC90_RS03720 () | 796217..797749 | + | 1533 | WP_203267756.1 | phage portal protein | - |
| JQC90_RS03725 () | 797756..798706 | + | 951 | WP_203267757.1 | minor capsid protein | - |
| JQC90_RS03730 () | 798726..799271 | + | 546 | WP_203267758.1 | hypothetical protein | - |
| JQC90_RS03735 () | 799264..799407 | + | 144 | WP_203267759.1 | hypothetical protein | - |
| JQC90_RS03740 () | 799661..800266 | + | 606 | WP_203267760.1 | DUF4355 domain-containing protein | - |
| JQC90_RS03745 () | 800283..801212 | + | 930 | WP_049375360.1 | phage major capsid protein | - |
| JQC90_RS03750 () | 801234..801503 | + | 270 | WP_145437673.1 | hypothetical protein | - |
| JQC90_RS03755 () | 801505..801834 | + | 330 | WP_002493376.1 | phage head-tail connector protein | - |
| JQC90_RS03760 () | 801831..802133 | + | 303 | WP_203267761.1 | hypothetical protein | - |
| JQC90_RS03765 () | 802133..802495 | + | 363 | WP_203267762.1 | HK97 gp10 family phage protein | - |
| JQC90_RS03770 () | 802495..802884 | + | 390 | WP_203267763.1 | hypothetical protein | - |
| JQC90_RS03775 () | 802928..803482 | + | 555 | WP_070857997.1 | phage major tail protein, TP901-1 family | - |
| JQC90_RS03780 () | 803545..803904 | + | 360 | WP_016898274.1 | hypothetical protein | - |
| JQC90_RS03785 () | 803946..804290 | + | 345 | WP_193627031.1 | hypothetical protein | - |
| JQC90_RS03790 () | 804305..808102 | + | 3798 | WP_203267764.1 | phage tail protein | - |
| JQC90_RS03795 () | 808114..809070 | + | 957 | WP_203267765.1 | phage tail family protein | - |
| JQC90_RS03800 () | 809082..810542 | + | 1461 | WP_203267766.1 | hypothetical protein | - |
| JQC90_RS03805 () | 810545..812428 | + | 1884 | WP_203267767.1 | DUF2817 domain-containing protein | - |
| JQC90_RS03810 () | 812444..813631 | + | 1188 | WP_203267768.1 | BppU family phage baseplate upper protein | - |
| JQC90_RS03815 () | 813645..814067 | + | 423 | WP_203267769.1 | hypothetical protein | - |
| JQC90_RS03820 () | 814048..814446 | + | 399 | WP_002493363.1 | hypothetical protein | - |
| JQC90_RS03825 () | 814500..816380 | + | 1881 | WP_203267770.1 | Bifunctional autolysin | VF |
| JQC90_RS03830 () | 816433..817503 | + | 1071 | WP_203267771.1 | BppU family phage baseplate upper protein | - |
| JQC90_RS03835 () | 817515..817868 | + | 354 | WP_203267772.1 | hypothetical protein | - |
| JQC90_RS03840 () | 817861..818007 | + | 147 | WP_203267773.1 | XkdX family protein | - |
| JQC90_RS03845 () | 818068..818478 | + | 411 | WP_103416138.1 | phage holin | - |
| JQC90_RS03850 () | 818453..819916 | + | 1464 | WP_203267774.1 | Lysostaphin | VF |
| JQC90_RS03855 () | 820190..821062 | + | 873 | Protein_767 | PTS lactose transporter subunit IIBC | - |
| JQC90_RS03860 () | 821078..822490 | + | 1413 | WP_001832731.1 | 6-phospho-beta-galactosidase | - |
| JQC90_RS03865 () | 822761..823627 | + | 867 | WP_002438596.1 | alpha/beta hydrolase | - |
| JQC90_RS03870 () | 823704..824729 | - | 1026 | WP_001829769.1 | LLM class flavin-dependent oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|