MGE detailed information
MGE type: IScluster/Tn MGE length: 10592 bp
Accession: NZ_CP069081 Location: 76914..87505 Organism: Pseudomonas putida strain LWPZF Replicon: plasmid pLWPZF
Accession: NZ_CP069081 Location: 76914..87505 Organism: Pseudomonas putida strain LWPZF Replicon: plasmid pLWPZF
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNO42_RS29240 (JNO42_29075) | 72270..72557 | + | 288 | WP_131201113.1 | hypothetical protein | - |
| JNO42_RS29245 (JNO42_29080) | 72623..72901 | + | 279 | WP_009683795.1 | HU family DNA-binding protein | - |
| JNO42_RS29250 (JNO42_29085) | 73018..73878 | + | 861 | WP_023118077.1 | SprT-like domain-containing protein | - |
| JNO42_RS29255 (JNO42_29090) | 73903..74283 | + | 381 | WP_031642852.1 | hypothetical protein | - |
| JNO42_RS29260 | 74304..74504 | + | 201 | WP_009683799.1 | hypothetical protein | - |
| JNO42_RS29265 (JNO42_29095) | 74571..76190 | + | 1620 | WP_043092171.1 | DNA sulfur modification protein DndB | - |
| JNO42_RS29270 (JNO42_29100) | 76914..77429 | - | 516 | Protein_83 | IS110-like element IS1492 family transposase | - |
| JNO42_RS29275 (JNO42_29105) | 77436..78323 | + | 888 | Protein_84 | IS3 family transposase ISPpu4 | Transposase |
| JNO42_RS29280 (JNO42_29110) | 78549..79949 | + | 1401 | WP_016355698.1 | FAD-linked oxidase C-terminal domain-containing protein | - |
| JNO42_RS29285 (JNO42_29115) | 80153..80365 | + | 213 | WP_134939350.1 | hypothetical protein | - |
| JNO42_RS29290 | 80435..80631 | + | 197 | Protein_87 | YeeE/YedE family protein | - |
| JNO42_RS29850 (JNO42_29120) | 80662..83518 | - | 2857 | Protein_88 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| JNO42_RS29310 (JNO42_29125) | 83545..84108 | - | 564 | WP_172773422.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| JNO42_RS29315 (JNO42_29130) | 84318..84581 | + | 264 | WP_016355699.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| JNO42_RS29320 (JNO42_29135) | 84568..84849 | + | 282 | WP_016355700.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| JNO42_RS29325 (JNO42_29140) | 85060..85332 | + | 273 | Protein_92 | 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 | VF |
| JNO42_RS29330 (JNO42_29145) | 85387..86413 | + | 1027 | Protein_93 | IS30 family transposase IS1394 | Transposase |
| JNO42_RS29335 (JNO42_29150) | 86445..86984 | + | 540 | Protein_94 | group II intron maturase-specific domain-containing protein | - |
| JNO42_RS29340 (JNO42_29155) | 87065..87442 | + | 378 | Protein_95 | IS3 family transposase ISPen2 | Transposase |
| JNO42_RS29345 (JNO42_29160) | 87576..88259 | + | 684 | WP_009683812.1 | serine acetyltransferase | - |
| JNO42_RS29350 (JNO42_29165) | 88265..89608 | - | 1344 | WP_009683813.1 | aminodeoxychorismate synthase component I | - |
| JNO42_RS29355 (JNO42_29170) | 89652..90215 | - | 564 | WP_009683814.1 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | - |
| JNO42_RS29360 (JNO42_29175) | 90311..91658 | - | 1348 | Protein_99 | gluconate:H+ symporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|