MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 20403 bp
Accession: NZ_CP069073 Location: 3130971..3151373 Organism: Mycobacterium tuberculosis strain N0054 Replicon: chromosome
Accession: NZ_CP069073 Location: 3130971..3151373 Organism: Mycobacterium tuberculosis strain N0054 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JN140_RS14940 | 3126257..3126430 | + | 174 | WP_244750268.1 | hypothetical protein | - |
| JN140_RS14945 | 3126664..3126738 | + | 75 | Protein_2950 | hypothetical protein | - |
| JN140_RS14955 | 3128077..3128289 | + | 213 | WP_049958771.1 | hypothetical protein | - |
| JN140_RS14960 | 3128394..3128705 | + | 312 | WP_003414190.1 | hypothetical protein | - |
| JN140_RS14965 | 3128727..3128963 | - | 237 | Protein_2954 | transposase | - |
| JN140_RS14970 | 3129125..3129733 | + | 609 | WP_003414195.1 | hypothetical protein | - |
| JN140_RS14975 | 3129804..3131213 | + | 1410 | WP_025985358.1 | DDE-type integrase/transposase/recombinase | - |
| JN140_RS14980 | 3131210..3132022 | + | 813 | WP_003899491.1 | hypothetical protein | VF |
| JN140_RS14990 | 3136512..3136853 | - | 342 | WP_003414276.1 | CRISPR-associated endonuclease Cas2 | - |
| JN140_RS14995 | 3136854..3137870 | - | 1017 | WP_003414279.1 | CRISPR-associated endonuclease Cas1 | - |
| JN140_RS15000 | 3137883..3139130 | - | 1248 | WP_003899494.1 | type III-A CRISPR-associated CARF protein Csm6 | - |
| JN140_RS15005 | 3139127..3140254 | - | 1128 | WP_003414285.1 | type III-A CRISPR-associated RAMP protein Csm5 | - |
| JN140_RS15010 | 3140251..3141159 | - | 909 | WP_003414288.1 | type III-A CRISPR-associated RAMP protein Csm4 | - |
| JN140_RS15015 | 3141140..3141850 | - | 711 | WP_003414292.1 | type III-A CRISPR-associated RAMP protein Csm3 | - |
| JN140_RS15020 | 3141860..3142234 | - | 375 | WP_003414296.1 | type III-A CRISPR-associated protein Csm2 | - |
| JN140_RS15025 | 3142231..3144669 | - | 2439 | WP_003900580.1 | type III-A CRISPR-associated protein Cas10/Csm1 | - |
| JN140_RS15030 | 3144666..3145454 | - | 789 | WP_003917092.1 | CRISPR-associated endoribonuclease Cas6 | - |
| JN140_RS15035 | 3145788..3146333 | - | 546 | WP_014584866.1 | DUF1802 family protein | - |
| JN140_RS15040 | 3146605..3147489 | - | 885 | WP_003414409.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| JN140_RS15045 | 3147492..3148379 | - | 888 | WP_003414414.1 | type IV toxin-antitoxin system AbiEi family antitoxin | Antitoxin Detail |
| JN140_RS15050 | 3148684..3149229 | - | 546 | WP_019284034.1 | DUF1802 family protein | - |
| JN140_RS15055 | 3149226..3149495 | - | 270 | WP_003414489.1 | DUF2277 family protein | - |
| JN140_RS15060 | 3149516..3149908 | - | 393 | WP_003414492.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| JN140_RS15065 | 3149905..3150120 | - | 216 | WP_003414495.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JN140_RS15070 | 3150167..3150916 | + | 750 | WP_003414497.1 | enoyl-CoA hydratase | - |
| JN140_RS15075 | 3150995..3152077 | - | 1083 | WP_003414499.1 | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | - |
| JN140_RS15080 | 3152070..3153380 | - | 1311 | WP_003414501.1 | ABC transporter substrate-binding protein | - |
| JN140_RS15085 | 3153383..3154210 | - | 828 | WP_003414504.1 | carbohydrate ABC transporter permease | - |
| JN140_RS15090 | 3154207..3155118 | - | 912 | WP_003414505.1 | sugar ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|