MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 57231 bp
Accession: NZ_CP069004 Location: 127176..184406 Organism: Sulfitobacter mediterraneus strain SC1-11 Replicon: chromosome
Accession: NZ_CP069004 Location: 127176..184406 Organism: Sulfitobacter mediterraneus strain SC1-11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNX03_RS00535 () | 122747..123541 | + | 795 | WP_203210563.1 | N-formylglutamate deformylase | - |
| JNX03_RS00540 () | 123538..125208 | + | 1671 | WP_203210564.1 | urocanate hydratase | - |
| JNX03_RS00545 () | 125400..126437 | + | 1038 | WP_203210565.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| JNX03_RS00550 () | 126441..126881 | - | 441 | WP_203212076.1 | hypothetical protein | - |
| JNX03_RS00555 () | 127473..128336 | + | 864 | WP_203210566.1 | hypothetical protein | - |
| JNX03_RS00560 () | 128333..128509 | + | 177 | WP_203210567.1 | hypothetical protein | - |
| JNX03_RS00565 () | 128530..128988 | + | 459 | WP_203212077.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| JNX03_RS00570 () | 128985..129560 | + | 576 | WP_203210568.1 | PIN domain-containing protein | Toxin Detail |
| JNX03_RS00575 () | 129615..130211 | - | 597 | WP_203210569.1 | hypothetical protein | - |
| JNX03_RS00580 () | 130458..130712 | + | 255 | WP_203212078.1 | helix-turn-helix domain-containing protein | - |
| JNX03_RS00585 () | 130981..131283 | + | 303 | WP_058260762.1 | helix-turn-helix domain-containing protein | - |
| JNX03_RS00590 () | 131276..132496 | + | 1221 | WP_203210570.1 | type II toxin-antitoxin system HipA family toxin | - |
| JNX03_RS00595 () | 132804..133001 | + | 198 | WP_035262952.1 | hypothetical protein | - |
| JNX03_RS00600 () | 133265..134551 | - | 1287 | WP_203210571.1 | calmodulin-binding protein | - |
| JNX03_RS00605 () | 134558..136972 | - | 2415 | WP_203210572.1 | AAA family ATPase | - |
| JNX03_RS00610 () | 137014..140454 | - | 3441 | WP_203210573.1 | AAA family ATPase | - |
| JNX03_RS00615 () | 140451..141698 | - | 1248 | WP_203210574.1 | DNA repair exonuclease | - |
| JNX03_RS00620 () | 141768..143843 | - | 2076 | WP_203210575.1 | BREX system Lon protease-like protein BrxL | - |
| JNX03_RS00625 () | 143853..146348 | - | 2496 | WP_203210576.1 | BREX-1 system phosphatase PglZ type A | - |
| JNX03_RS00630 () | 146345..149782 | - | 3438 | WP_203210577.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| JNX03_RS00635 () | 149782..153300 | - | 3519 | WP_203210578.1 | BREX system P-loop protein BrxC | - |
| JNX03_RS00640 () | 153305..153907 | - | 603 | WP_203210579.1 | DUF1788 domain-containing protein | - |
| JNX03_RS00645 () | 153909..154523 | - | 615 | WP_203210580.1 | DUF1819 family protein | - |
| JNX03_RS00650 () | 154520..155290 | - | 771 | WP_203212079.1 | WYL domain-containing protein | - |
| JNX03_RS00655 () | 155963..156841 | + | 879 | WP_203210581.1 | DUF1738 domain-containing protein | - |
| JNX03_RS00660 () | 157465..157773 | + | 309 | WP_203210582.1 | hypothetical protein | - |
| JNX03_RS00665 () | 157770..157973 | + | 204 | WP_203210583.1 | hypothetical protein | - |
| JNX03_RS00670 () | 157970..158185 | + | 216 | WP_203210584.1 | hypothetical protein | - |
| JNX03_RS00675 () | 158182..158463 | + | 282 | WP_203210585.1 | hypothetical protein | - |
| JNX03_RS00680 () | 158638..159228 | + | 591 | WP_050673796.1 | hypothetical protein | - |
| JNX03_RS00685 () | 159215..161023 | + | 1809 | WP_050673797.1 | relaxase/mobilization nuclease domain-containing protein | - |
| JNX03_RS00690 () | 161016..162908 | + | 1893 | WP_050673798.1 | type IV secretory system conjugative DNA transfer family protein | - |
| JNX03_RS00695 () | 163800..165032 | - | 1233 | WP_203210586.1 | hypothetical protein | - |
| JNX03_RS00700 () | 165334..166047 | - | 714 | WP_131724103.1 | hypothetical protein | - |
| JNX03_RS00705 () | 166484..167482 | - | 999 | WP_050673801.1 | type IV secretion system protein | - |
| JNX03_RS00710 () | 167503..167679 | - | 177 | WP_165589936.1 | DUF4177 domain-containing protein | - |
| JNX03_RS00715 () | 167672..168667 | - | 996 | WP_203210587.1 | Flp pilus assembly complex ATPase component TadA | - |
| JNX03_RS00720 () | 168670..169986 | - | 1317 | WP_203210588.1 | TrbI/VirB10 family protein | - |
| JNX03_RS00725 () | 169979..170674 | - | 696 | WP_203210589.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| JNX03_RS00730 () | 170678..171328 | - | 651 | WP_203210590.1 | type IV secretion system protein | - |
| JNX03_RS00735 () | 171332..172111 | - | 780 | WP_203210591.1 | conjugal transfer protein TraF | - |
| JNX03_RS00740 () | 172108..173202 | - | 1095 | WP_203212080.1 | lytic transglycosylase domain-containing protein | - |
| JNX03_RS00745 () | 173249..173407 | - | 159 | WP_203210592.1 | hypothetical protein | - |
| JNX03_RS00750 () | 173400..175766 | - | 2367 | WP_203210593.1 | type IV secretion system protein B4 | - |
| JNX03_RS00755 () | 175756..176034 | - | 279 | WP_024096577.1 | VirB3 family type IV secretion system protein | - |
| JNX03_RS00760 () | 176042..176332 | - | 291 | WP_025060020.1 | TrbC/VirB2 family protein | - |
| JNX03_RS00765 () | 176332..176907 | - | 576 | WP_203210594.1 | lytic transglycosylase domain-containing protein | - |
| JNX03_RS00770 () | 176972..177298 | - | 327 | WP_203210595.1 | hypothetical protein | - |
| JNX03_RS00775 () | 177492..177749 | + | 258 | WP_203210596.1 | hypothetical protein | - |
| JNX03_RS00780 () | 177886..178434 | + | 549 | WP_203210597.1 | hypothetical protein | - |
| JNX03_RS00785 () | 178692..178904 | - | 213 | WP_035920163.1 | helix-turn-helix domain-containing protein | - |
| JNX03_RS00790 () | 179063..179704 | + | 642 | WP_203210598.1 | hypothetical protein | - |
| JNX03_RS00795 () | 179701..182409 | - | 2709 | WP_203210599.1 | UvrD-helicase domain-containing protein | - |
| JNX03_RS00800 () | 182431..182769 | - | 339 | WP_203210600.1 | Arc family DNA-binding protein | - |
| JNX03_RS00805 () | 182854..183048 | + | 195 | WP_203210601.1 | Arc family DNA-binding protein | - |
| JNX03_RS00810 () | 183072..183263 | + | 192 | WP_203210602.1 | hypothetical protein | - |
| JNX03_RS00815 () | 183260..184291 | + | 1032 | WP_203210603.1 | tyrosine-type recombinase/integrase | - |
| JNX03_RS00825 () | 184575..185228 | + | 654 | WP_203210604.1 | protein-L-isoaspartate O-methyltransferase | - |
| JNX03_RS00830 () | 185283..186707 | + | 1425 | WP_203210605.1 | TolC family outer membrane protein | - |
| JNX03_RS00835 () | 186781..187866 | + | 1086 | WP_203210606.1 | hypothetical protein | - |
| JNX03_RS00840 () | 187873..189336 | - | 1464 | WP_203210607.1 | cobyric acid synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|