MGE detailed information
MGE type: Genomic_island MGE length: 8550 bp
Accession: NZ_CP068829 Location: 4404600..4413149 Organism: Escherichia coli strain RIVM_C030453 Replicon: chromosome
Accession: NZ_CP068829 Location: 4404600..4413149 Organism: Escherichia coli strain RIVM_C030453 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN50_RS21100 () | 4401131..4401856 | - | 726 | WP_000066559.1 | type 1 fimbria chaperone FimC | - |
| JNN50_RS21105 () | 4401893..4402432 | - | 540 | WP_000824099.1 | type 1 fimbrial protein | - |
| JNN50_RS21110 () | 4402497..4403045 | - | 549 | WP_106106609.1 | type 1 fimbrial major subunit FimA | - |
| JNN50_RS21115 () | 4403526..4404122 | - | 597 | WP_000044708.1 | type 1 fimbria switch DNA invertase FimE | - |
| JNN50_RS21120 () | 4404600..4405202 | - | 603 | WP_001564306.1 | type 1 fimbria switch DNA invertase FimB | - |
| JNN50_RS21125 () | 4406666..4407382 | + | 717 | WP_001519309.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| JNN50_RS21130 () | 4407402..4408508 | + | 1107 | WP_001519308.1 | N-acetylneuraminate epimerase | - |
| JNN50_RS21135 () | 4408573..4409553 | + | 981 | WP_001519307.1 | transposase | - |
| JNN50_RS21140 () | 4410136..4411377 | - | 1242 | Protein_4139 | helicase YjhR | - |
| JNN50_RS21145 () | 4411440..4411739 | + | 300 | WP_001519304.1 | GNAT family N-acetyltransferase | - |
| JNN50_RS21150 () | 4412116..4412373 | + | 258 | WP_001550554.1 | hypothetical protein | Toxin Detail |
| JNN50_RS21155 () | 4412385..4412936 | + | 552 | WP_001519303.1 | N-acetyltransferase | Antitoxin Detail |
| JNN50_RS21160 () | 4412988..4413149 | + | 162 | WP_001519302.1 | hypothetical protein | - |
| JNN50_RS21165 () | 4413186..4413734 | + | 549 | WP_001519301.1 | hypothetical protein | - |
| JNN50_RS21170 () | 4413861..4414121 | + | 261 | WP_000084876.1 | hypothetical protein | - |
| JNN50_RS21175 () | 4414159..4414275 | + | 117 | Protein_4146 | VOC family protein | - |
| JNN50_RS21180 () | 4414520..4415641 | + | 1122 | WP_000010833.1 | M42 family metallopeptidase | - |
| JNN50_RS21185 () | 4415638..4415916 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| JNN50_RS21190 () | 4415928..4417241 | + | 1314 | WP_001519300.1 | galactitol-specific PTS transporter subunit IIC | - |
| JNN50_RS21195 () | 4417254..4418060 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|