MGE detailed information
MGE type: Genomic_island MGE length: 10759 bp
Accession: NZ_CP068829 Location: 3997927..4008685 Organism: Escherichia coli strain RIVM_C030453 Replicon: chromosome
Accession: NZ_CP068829 Location: 3997927..4008685 Organism: Escherichia coli strain RIVM_C030453 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN50_RS19160 () | 3993273..3994055 | - | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| JNN50_RS19165 () | 3994371..3997580 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| JNN50_RS19170 () | 3997741..3997881 | + | 141 | WP_001308408.1 | ash family protein | - |
| JNN50_RS19175 () | 3997927..3998397 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| JNN50_RS19180 () | 3998394..3998496 | + | 103 | Protein_3758 | helix-turn-helix domain-containing protein | - |
| JNN50_RS19185 () | 3998588..3998746 | + | 159 | Protein_3759 | integrase | - |
| JNN50_RS19195 () | 3998951..4000204 | - | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JNN50_RS19200 () | 4000216..4001319 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| JNN50_RS19205 () | 4001607..4002662 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| JNN50_RS19210 () | 4002701..4003102 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| JNN50_RS19215 () | 4003160..4004404 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 4003820..4003900 | - | 81 | NuclAT_10 | - | - |
| - () | 4003820..4003900 | - | 81 | NuclAT_10 | - | - |
| - () | 4003820..4003900 | - | 81 | NuclAT_10 | - | - |
| - () | 4003820..4003900 | - | 81 | NuclAT_10 | - | - |
| JNN50_RS19220 () | 4004496..4004954 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| JNN50_RS19225 () | 4005215..4006672 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| JNN50_RS19230 () | 4006729..4007081 | - | 353 | Protein_3767 | peptide chain release factor H | - |
| JNN50_RS19235 () | 4007077..4007283 | - | 207 | Protein_3768 | RtcB family protein | - |
| JNN50_RS19240 () | 4007529..4007981 | - | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| JNN50_RS19245 () | 4007991..4008389 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| JNN50_RS19250 () | 4008392..4008685 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| JNN50_RS19255 () | 4008737..4009792 | - | 1056 | WP_001550655.1 | DNA polymerase IV | - |
| JNN50_RS19260 () | 4009863..4010648 | - | 786 | WP_019842510.1 | putative lateral flagellar export/assembly protein LafU | - |
| JNN50_RS19265 () | 4010620..4012332 | + | 1713 | Protein_3774 | flagellar biosynthesis protein FlhA | - |
| JNN50_RS19270 () | 4012437..4012715 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| JNN50_RS19275 () | 4012708..4013064 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|