MGE detailed information
MGE type: Prophage MGE length: 53284 bp
Accession: NZ_CP068828 Location: 4674273..4727556 Organism: Escherichia coli strain RIVM_C030443 Replicon: chromosome
Accession: NZ_CP068828 Location: 4674273..4727556 Organism: Escherichia coli strain RIVM_C030443 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN35_RS22395 () | 4669329..4669745 | - | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| JNN35_RS22400 () | 4669856..4670569 | - | 714 | WP_001226928.1 | acid phosphatase AphA | - |
| JNN35_RS22405 () | 4670970..4671473 | + | 504 | WP_001027702.1 | hypothetical protein | - |
| JNN35_RS22410 () | 4671695..4672888 | - | 1194 | WP_000486940.1 | aromatic amino acid transaminase | - |
| JNN35_RS22415 () | 4673141..4674220 | - | 1080 | WP_001147321.1 | alanine racemase | - |
| JNN35_RS22420 () | 4674273..4675688 | - | 1416 | WP_000918364.1 | replicative DNA helicase | - |
| JNN35_RS22425 () | 4675771..4676754 | + | 984 | WP_000235525.1 | L-threonine 3-dehydrogenase | VF |
| JNN35_RS22430 () | 4676920..4677162 | - | 243 | WP_000891411.1 | envelope stress response protein PspG | - |
| JNN35_RS22435 () | 4677296..4678333 | - | 1038 | WP_001528313.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| JNN35_RS22440 () | 4678422..4679519 | + | 1098 | WP_000332274.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| JNN35_RS22445 () | 4679581..4679829 | + | 249 | WP_001217553.1 | DinI-like family protein | - |
| JNN35_RS22450 () | 4679947..4680234 | - | 288 | WP_021568063.1 | hypothetical protein | - |
| JNN35_RS22455 () | 4680277..4681317 | - | 1041 | WP_094284486.1 | tail fiber domain-containing protein | - |
| JNN35_RS22460 () | 4681330..4681599 | - | 270 | WP_001204892.1 | hypothetical protein | - |
| JNN35_RS22465 () | 4681599..4683956 | - | 2358 | WP_202852074.1 | prophage tail fiber N-terminal domain-containing protein | - |
| JNN35_RS22470 () | 4684021..4684620 | - | 600 | WP_001518415.1 | hypothetical protein | VF |
| JNN35_RS22475 () | 4684688..4688167 | - | 3480 | WP_202852075.1 | host specificity protein J | - |
| JNN35_RS22480 () | 4688234..4688572 | - | 339 | WP_001332187.1 | hypothetical protein | - |
| JNN35_RS22485 () | 4688645..4689247 | - | 603 | WP_071792568.1 | tail assembly protein | - |
| JNN35_RS22490 () | 4689184..4689927 | - | 744 | WP_077128769.1 | C40 family peptidase | - |
| JNN35_RS22495 () | 4689933..4690631 | - | 699 | WP_077128770.1 | phage minor tail protein L | - |
| JNN35_RS22500 () | 4690631..4690960 | - | 330 | WP_077128771.1 | phage tail protein | - |
| JNN35_RS22505 () | 4690957..4693536 | - | 2580 | WP_103518369.1 | phage tail tape measure protein | - |
| JNN35_RS22510 () | 4693529..4693963 | - | 435 | WP_021519779.1 | phage tail assembly protein T | - |
| JNN35_RS22515 () | 4693945..4694367 | - | 423 | WP_096951668.1 | phage minor tail protein G | - |
| JNN35_RS22520 () | 4694383..4695123 | - | 741 | WP_001349920.1 | phage tail protein | - |
| JNN35_RS22525 () | 4695131..4695526 | - | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| JNN35_RS22530 () | 4695523..4696101 | - | 579 | WP_000975081.1 | phage tail protein | - |
| JNN35_RS22535 () | 4696113..4696466 | - | 354 | WP_053270633.1 | head-tail joining protein | - |
| JNN35_RS22540 () | 4696478..4696876 | - | 399 | WP_072153568.1 | DNA-packaging protein FI | - |
| JNN35_RS22545 () | 4696918..4697943 | - | 1026 | WP_126492219.1 | major capsid protein | - |
| JNN35_RS22550 () | 4697999..4698331 | - | 333 | WP_001299443.1 | head decoration protein | - |
| JNN35_RS22555 () | 4698341..4699660 | - | 1320 | WP_052939137.1 | S49 family peptidase | - |
| JNN35_RS22560 () | 4699641..4701242 | - | 1602 | WP_016231920.1 | phage portal protein | - |
| JNN35_RS22565 () | 4701239..4701445 | - | 207 | WP_000198149.1 | gpW family protein | - |
| JNN35_RS22570 () | 4701442..4703367 | - | 1926 | WP_202852076.1 | phage terminase large subunit family protein | - |
| JNN35_RS22575 () | 4703342..4703887 | - | 546 | WP_000453567.1 | terminase small subunit | - |
| JNN35_RS22580 () | 4704495..4704647 | - | 153 | WP_001139681.1 | hypothetical protein | - |
| JNN35_RS22585 () | 4704635..4705102 | - | 468 | WP_202852077.1 | lysis protein | - |
| JNN35_RS22590 () | 4705099..4705632 | - | 534 | WP_021518231.1 | lysozyme | - |
| JNN35_RS22595 () | 4705746..4706006 | + | 261 | WP_001306174.1 | hypothetical protein | - |
| JNN35_RS22600 () | 4705954..4706505 | - | 552 | WP_202852078.1 | YdfR family protein | - |
| JNN35_RS22605 () | 4706510..4706725 | - | 216 | WP_000839572.1 | class II holin family protein | - |
| JNN35_RS22630 () | 4707546..4707971 | - | 426 | WP_000217632.1 | hypothetical protein | - |
| JNN35_RS22635 () | 4708252..4709004 | - | 753 | WP_202852079.1 | antitermination protein | - |
| JNN35_RS22640 () | 4709018..4710007 | - | 990 | WP_202852080.1 | DUF968 domain-containing protein | - |
| JNN35_RS22645 () | 4710015..4710824 | - | 810 | WP_001061444.1 | KilA-N domain-containing protein | - |
| JNN35_RS22650 () | 4710844..4711233 | - | 390 | WP_000767133.1 | RusA family crossover junction endodeoxyribonuclease | - |
| JNN35_RS22655 () | 4711230..4711556 | - | 327 | WP_000210187.1 | LexA family transcriptional regulator | - |
| JNN35_RS22660 () | 4711553..4712206 | - | 654 | WP_000066917.1 | phage N-6-adenine-methyltransferase | - |
| JNN35_RS22665 () | 4712301..4713293 | - | 993 | WP_016239036.1 | hypothetical protein | - |
| JNN35_RS22670 () | 4713250..4713462 | - | 213 | WP_001250270.1 | DUF4222 domain-containing protein | - |
| JNN35_RS22675 () | 4713638..4714222 | - | 585 | WP_000514174.1 | hypothetical protein | - |
| JNN35_RS22680 () | 4714260..4714460 | - | 201 | WP_000205494.1 | cell division protein | - |
| JNN35_RS22685 () | 4714558..4715184 | + | 627 | WP_000450740.1 | LexA family transcriptional regulator | - |
| JNN35_RS22690 () | 4715552..4716055 | - | 504 | WP_000357060.1 | hypothetical protein | - |
| JNN35_RS22695 () | 4716200..4716510 | + | 311 | Protein_4442 | hypothetical protein | - |
| JNN35_RS22700 () | 4716525..4716887 | + | 363 | WP_000135682.1 | hypothetical protein | - |
| JNN35_RS22705 () | 4716953..4717777 | + | 825 | WP_097333126.1 | DUF2303 family protein | - |
| JNN35_RS22710 () | 4717905..4718441 | + | 537 | WP_094284483.1 | 5'-deoxynucleotidase | - |
| JNN35_RS22715 () | 4718432..4719310 | + | 879 | WP_053287588.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| JNN35_RS22720 () | 4719307..4719510 | + | 204 | WP_000156999.1 | hypothetical protein | - |
| JNN35_RS22725 () | 4719503..4719742 | + | 240 | WP_000476212.1 | hypothetical protein | - |
| JNN35_RS22730 () | 4719739..4720050 | + | 312 | WP_000073886.1 | hypothetical protein | - |
| JNN35_RS22735 () | 4720050..4720622 | + | 573 | WP_063501529.1 | 3'-5' exoribonuclease | - |
| JNN35_RS22740 () | 4720659..4720940 | + | 282 | WP_001093918.1 | pyocin activator PrtN family protein | - |
| JNN35_RS22745 () | 4720988..4721161 | - | 174 | WP_000390072.1 | hypothetical protein | - |
| JNN35_RS22750 () | 4721201..4721587 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| JNN35_RS22755 () | 4721617..4722189 | - | 573 | WP_000458584.1 | SocA family protein | Antitoxin Detail |
| JNN35_RS22760 () | 4722425..4722547 | - | 123 | WP_001300034.1 | hypothetical protein | - |
| JNN35_RS22765 () | 4722910..4723872 | - | 963 | WP_202852081.1 | DUF2713 family protein | - |
| JNN35_RS22770 () | 4724190..4724705 | + | 516 | WP_000416263.1 | zinc uptake transcriptional repressor Zur | - |
| JNN35_RS22775 () | 4724747..4724956 | - | 210 | WP_001030593.1 | CsbD family protein | - |
| JNN35_RS22780 () | 4725072..4726397 | - | 1326 | WP_001301116.1 | MATE family efflux transporter DinF | - |
| JNN35_RS22785 () | 4726470..4727078 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| JNN35_RS22790 () | 4727188..4727556 | - | 369 | WP_000002913.1 | diacylglycerol kinase | - |
| JNN35_RS22795 () | 4727727..4730150 | + | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| JNN35_RS22800 () | 4730305..4731177 | - | 873 | WP_000455227.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| JNN35_RS22805 () | 4731190..4731687 | - | 498 | WP_001305723.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|