MGE detailed information
MGE type: Genomic_island MGE length: 19253 bp
Accession: NZ_CP068828 Location: 4355912..4375164 Organism: Escherichia coli strain RIVM_C030443 Replicon: chromosome
Accession: NZ_CP068828 Location: 4355912..4375164 Organism: Escherichia coli strain RIVM_C030443 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN35_RS20830 () | 4351391..4351894 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| JNN35_RS20835 () | 4351907..4352437 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| JNN35_RS20840 () | 4352447..4355083 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| JNN35_RS20845 () | 4355150..4355875 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| JNN35_RS20850 () | 4355912..4356451 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| JNN35_RS20855 () | 4356516..4357064 | - | 549 | WP_000695557.1 | hypothetical protein | VF |
| JNN35_RS20860 () | 4357546..4358142 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| JNN35_RS20865 () | 4358620..4359222 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| JNN35_RS20870 () | 4360678..4361394 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| JNN35_RS20875 () | 4361414..4362520 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| JNN35_RS20880 () | 4362585..4363565 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| JNN35_RS20885 () | 4364148..4365388 | - | 1241 | Protein_4089 | helicase YjhR | - |
| JNN35_RS20890 () | 4365504..4365749 | + | 246 | Protein_4090 | GNAT family N-acetyltransferase | - |
| JNN35_RS20895 () | 4366126..4366383 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| JNN35_RS20900 () | 4366395..4366940 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| JNN35_RS20905 () | 4366996..4367742 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| JNN35_RS20910 () | 4367911..4368129 | + | 219 | Protein_4094 | hypothetical protein | - |
| JNN35_RS20915 () | 4368167..4368283 | + | 117 | Protein_4095 | VOC family protein | - |
| JNN35_RS20920 () | 4368528..4369649 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| JNN35_RS20925 () | 4369646..4369924 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| JNN35_RS20930 () | 4369936..4371249 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| JNN35_RS20935 () | 4371262..4372068 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| JNN35_RS20940 () | 4372199..4372630 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| JNN35_RS20945 () | 4372642..4373274 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| JNN35_RS20950 () | 4373291..4374073 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| JNN35_RS20955 () | 4374376..4375164 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| JNN35_RS20960 () | 4375169..4376074 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| JNN35_RS20965 () | 4376085..4378052 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| JNN35_RS20970 () | 4378159..4379508 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|