MGE detailed information
MGE type: Genomic_island MGE length: 11806 bp
Accession: NZ_CP068827 Location: 3717550..3729355 Organism: Escherichia coli strain RIVM_C030371 Replicon: chromosome
Accession: NZ_CP068827 Location: 3717550..3729355 Organism: Escherichia coli strain RIVM_C030371 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN58_RS17730 () | 3713245..3714558 | - | 1314 | WP_001519300.1 | galactitol-specific PTS transporter subunit IIC | - |
| JNN58_RS17735 () | 3714570..3714848 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| JNN58_RS17740 () | 3714845..3715966 | - | 1122 | WP_000010833.1 | M42 family metallopeptidase | - |
| JNN58_RS17745 () | 3716211..3716327 | - | 117 | Protein_3464 | VOC family protein | - |
| JNN58_RS17750 () | 3716365..3716625 | - | 261 | WP_000084876.1 | hypothetical protein | - |
| JNN58_RS17755 () | 3716752..3717300 | - | 549 | WP_001519301.1 | hypothetical protein | - |
| JNN58_RS17760 () | 3717337..3717498 | - | 162 | WP_001519302.1 | hypothetical protein | - |
| JNN58_RS17765 () | 3717550..3718101 | - | 552 | WP_001519303.1 | N-acetyltransferase | Antitoxin Detail |
| JNN58_RS17770 () | 3718113..3718370 | - | 258 | WP_001550554.1 | hypothetical protein | Toxin Detail |
| JNN58_RS17775 () | 3718747..3719046 | - | 300 | WP_001519304.1 | GNAT family N-acetyltransferase | - |
| JNN58_RS17780 () | 3719109..3720350 | + | 1242 | Protein_3471 | helicase YjhR | - |
| JNN58_RS17785 () | 3720933..3721913 | - | 981 | WP_001519307.1 | transposase | - |
| JNN58_RS17790 () | 3721978..3723084 | - | 1107 | WP_001519308.1 | N-acetylneuraminate epimerase | - |
| JNN58_RS17795 () | 3723104..3723820 | - | 717 | WP_001519309.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| JNN58_RS17800 () | 3725284..3725886 | + | 603 | WP_001564306.1 | Tyrosine recombinase XerC | VF |
| JNN58_RS17805 () | 3726364..3726960 | + | 597 | WP_000044708.1 | Tyrosine recombinase XerD | VF |
| JNN58_RS17810 () | 3727441..3727989 | + | 549 | WP_001357506.1 | Type-1 fimbrial protein, A chain | VF |
| JNN58_RS17815 () | 3728054..3728593 | + | 540 | WP_000824099.1 | putative major fimbrial subunit LpfA | VF |
| JNN58_RS17820 () | 3728630..3729355 | + | 726 | WP_000066559.1 | Chaperone protein FimC | VF |
| JNN58_RS17825 () | 3729421..3732057 | + | 2637 | WP_000120954.1 | fimbrial usher FimD | - |
| JNN58_RS17830 () | 3732067..3732597 | + | 531 | WP_001244821.1 | type 1 fimbria minor subunit FimF | - |
| JNN58_RS17835 () | 3732610..3733113 | + | 504 | WP_000870577.1 | type 1 fimbria minor subunit FimG | - |
| JNN58_RS17840 () | 3733133..3734035 | + | 903 | WP_000832236.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|