MGE detailed information
MGE type: Genomic_island MGE length: 45692 bp
Accession: NZ_CP068827 Location: 3432126..3477817 Organism: Escherichia coli strain RIVM_C030371 Replicon: chromosome
Accession: NZ_CP068827 Location: 3432126..3477817 Organism: Escherichia coli strain RIVM_C030371 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN58_RS16270 () | 3428532..3429251 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| JNN58_RS16275 () | 3429248..3430879 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| JNN58_RS16280 () | 3431059..3431289 | + | 231 | WP_001550470.1 | (4Fe-4S)-binding protein | - |
| JNN58_RS16285 () | 3431301..3431573 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| JNN58_RS16290 () | 3431802..3432098 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| JNN58_RS16295 () | 3432126..3432299 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| JNN58_RS16300 () | 3432418..3433935 | - | 1518 | WP_001550472.1 | lysine--tRNA ligase | - |
| JNN58_RS16305 () | 3434172..3435629 | - | 1458 | WP_001550473.1 | dipeptide/tripeptide permease DtpC | - |
| JNN58_RS16310 () | 3435688..3437835 | - | 2148 | WP_001550474.1 | lysine decarboxylase CadA | - |
| JNN58_RS16315 () | 3437915..3439249 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| JNN58_RS16320 () | 3439615..3441153 | - | 1539 | WP_001187178.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| JNN58_RS16325 () | 3441902..3442744 | - | 843 | WP_022645115.1 | DUF4942 domain-containing protein | - |
| JNN58_RS16330 () | 3442829..3443023 | - | 195 | WP_024181941.1 | DUF957 domain-containing protein | - |
| JNN58_RS16335 () | 3443102..3443251 | - | 150 | Protein_3188 | hypothetical protein | - |
| JNN58_RS16340 () | 3443248..3443625 | - | 378 | WP_022645116.1 | TA system toxin CbtA family protein | Toxin Detail |
| JNN58_RS16345 () | 3443715..3444083 | - | 369 | WP_078046143.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JNN58_RS16350 () | 3444246..3444467 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| JNN58_RS16355 () | 3444530..3445006 | - | 477 | WP_022645117.1 | RadC family protein | - |
| JNN58_RS16360 () | 3445022..3445501 | - | 480 | WP_001564060.1 | antirestriction protein | - |
| JNN58_RS16365 () | 3445767..3446585 | - | 819 | WP_001175165.1 | DUF945 domain-containing protein | - |
| JNN58_RS16370 () | 3446675..3446908 | - | 234 | WP_001278293.1 | DUF905 family protein | - |
| JNN58_RS16375 () | 3446914..3447591 | - | 678 | WP_001097302.1 | hypothetical protein | - |
| JNN58_RS16380 () | 3447739..3448419 | - | 681 | WP_001282921.1 | WYL domain-containing protein | - |
| JNN58_RS16385 () | 3448622..3449506 | - | 885 | WP_001116795.1 | 50S ribosome-binding GTPase | - |
| JNN58_RS16390 () | 3449607..3450830 | + | 1224 | WP_001107219.1 | hypothetical protein | - |
| JNN58_RS16395 () | 3451993..3452523 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| JNN58_RS16400 () | 3453193..3453924 | + | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| JNN58_RS16405 () | 3454445..3454897 | + | 453 | WP_000558152.1 | N-acetyltransferase | - |
| JNN58_RS16410 () | 3455433..3456368 | + | 936 | WP_000332862.1 | pseudouridine kinase | - |
| JNN58_RS16415 () | 3456361..3457296 | + | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| JNN58_RS16420 () | 3457380..3458630 | + | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| JNN58_RS16425 () | 3458649..3459743 | - | 1095 | WP_000370278.1 | sugar kinase | - |
| JNN58_RS16430 () | 3461044..3461610 | + | 567 | WP_001126810.1 | inovirus-type Gp2 protein | - |
| JNN58_RS16435 () | 3461868..3462443 | + | 576 | WP_001564054.1 | hypothetical protein | - |
| JNN58_RS16440 () | 3462512..3462745 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| JNN58_RS16445 () | 3462757..3462982 | + | 226 | Protein_3210 | hypothetical protein | - |
| JNN58_RS16450 () | 3463044..3463310 | - | 267 | Protein_3211 | IS3 family transposase IS2 | Transposase |
| JNN58_RS16455 () | 3463401..3464558 | + | 1158 | Protein_3212 | efflux RND transporter permease subunit | - |
| JNN58_RS16460 () | 3464679..3465329 | + | 651 | WP_001564048.1 | TetR/AcrR family transcriptional regulator | - |
| JNN58_RS16465 () | 3465352..3465645 | + | 294 | Protein_3214 | helix-turn-helix domain-containing protein | - |
| JNN58_RS16470 () | 3466002..3466547 | - | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| JNN58_RS16475 () | 3466592..3467743 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| JNN58_RS16480 () | 3467872..3468927 | - | 1056 | WP_000494233.1 | HTH-type transcriptional activator Btr | VF |
| JNN58_RS16485 () | 3468944..3470173 | - | 1230 | WP_000792585.1 | propanediol utilization sensor histidine kinase GrpP | - |
| JNN58_RS16490 () | 3470756..3471349 | - | 594 | Protein_3219 | maturase | - |
| JNN58_RS16495 () | 3471349..3471673 | - | 325 | Protein_3220 | hypothetical protein | - |
| JNN58_RS16500 () | 3471604..3471822 | - | 219 | WP_199609384.1 | hypothetical protein | - |
| JNN58_RS16505 () | 3472308..3473213 | - | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| JNN58_RS16510 () | 3473350..3474267 | - | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| JNN58_RS16515 () | 3474376..3476928 | - | 2553 | WP_022645121.1 | glycyl radical diol dehydratase GrpM | - |
| JNN58_RS16520 () | 3476977..3477552 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| JNN58_RS16525 () | 3477563..3477862 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| JNN58_RS16530 () | 3477886..3479403 | - | 1518 | WP_022645122.1 | propanediol utilization system aldehyde dehydrogenase GrpJ | - |
| JNN58_RS16535 () | 3479464..3480249 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| JNN58_RS16540 () | 3480271..3480552 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| JNN58_RS16545 () | 3480837..3482033 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| JNN58_RS16550 () | 3482062..3482559 | - | 498 | WP_001301167.1 | propanediol utilization system heme-binding protein GrpF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|