MGE detailed information
MGE type: Prophage MGE length: 47415 bp
Accession: NZ_CP068827 Location: 120130..167544 Organism: Escherichia coli strain RIVM_C030371 Replicon: chromosome
Accession: NZ_CP068827 Location: 120130..167544 Organism: Escherichia coli strain RIVM_C030371 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN58_RS00570 () | 116180..117163 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| JNN58_RS00575 () | 117641..119014 | + | 1374 | WP_001551034.1 | ATP-dependent RNA helicase DbpA | - |
| JNN58_RS00580 () | 119143..120078 | - | 936 | WP_000662472.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| JNN58_RS00585 () | 120130..121365 | - | 1236 | WP_001551035.1 | Putative defective protein IntQ ; Integrase | Integrase |
| JNN58_RS00590 () | 121367..121582 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| JNN58_RS00595 () | 121682..121870 | - | 189 | WP_001551036.1 | DUF1187 family protein | - |
| - () | 121686..121864 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 121686..121864 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 121686..121864 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 121686..121864 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| JNN58_RS00600 () | 121863..122057 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| JNN58_RS00605 () | 122114..122923 | - | 810 | WP_001551037.1 | recombination protein RecT | - |
| JNN58_RS00610 () | 122916..125567 | - | 2652 | WP_001551038.1 | exodeoxyribonuclease VIII | - |
| JNN58_RS00615 () | 125669..125944 | - | 276 | WP_001314664.1 | hypothetical protein | - |
| JNN58_RS00620 () | 126019..126189 | - | 171 | WP_001551041.1 | phage protein | - |
| JNN58_RS00625 () | 126189..126410 | - | 222 | WP_000560221.1 | killing protein KilR | - |
| JNN58_RS00630 () | 126953..127105 | - | 153 | WP_001551042.1 | DUF1391 family protein | - |
| JNN58_RS00635 () | 127559..128035 | - | 477 | WP_001551043.1 | DNA-binding transcriptional repressor RacR | - |
| JNN58_RS00640 () | 128159..128455 | + | 297 | WP_001551044.1 | toxin YdaS | - |
| JNN58_RS00645 () | 128478..128900 | + | 423 | WP_001551045.1 | phage protein | - |
| JNN58_RS00650 () | 128913..129771 | + | 859 | Protein_129 | DUF1376 domain-containing protein | - |
| JNN58_RS00655 () | 129778..130524 | + | 747 | WP_001551047.1 | ATP-binding protein | - |
| JNN58_RS00660 () | 130547..131308 | + | 762 | WP_001551048.1 | DUF1627 domain-containing protein | - |
| JNN58_RS00665 () | 131324..131755 | + | 432 | WP_001403739.1 | DUF977 family protein | - |
| JNN58_RS00670 () | 131949..133103 | + | 1155 | WP_000385105.1 | ATP-binding protein | - |
| JNN58_RS00675 () | 133078..135342 | + | 2265 | Protein_134 | S8 family peptidase | - |
| JNN58_RS00680 () | 135756..136355 | + | 600 | WP_000940316.1 | DUF1367 family protein | - |
| JNN58_RS00685 () | 136355..136645 | + | 291 | WP_001551052.1 | DUF1364 domain-containing protein | - |
| JNN58_RS00690 () | 136642..137184 | + | 543 | WP_000640136.1 | DUF1133 family protein | - |
| JNN58_RS00705 () | 138466..138681 | + | 216 | WP_000839599.1 | phage lysis protein EssD | - |
| JNN58_RS00710 () | 138681..139178 | + | 498 | WP_001551053.1 | lysozyme RrrD | - |
| JNN58_RS00715 () | 139395..139580 | + | 186 | WP_001228688.1 | prophage lysis lipoprotein RzoD | - |
| JNN58_RS00720 () | 139777..141235 | + | 1459 | Protein_141 | Trk system potassium transporter TrkG | - |
| JNN58_RS00725 () | 141373..142164 | + | 792 | WP_001291094.1 | ParB/Srx family N-terminal domain-containing protein | - |
| JNN58_RS00730 () | 142157..143089 | + | 933 | WP_001204037.1 | hypothetical protein | - |
| JNN58_RS00735 () | 143025..143276 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| JNN58_RS00740 () | 143280..144374 | + | 1095 | WP_001551055.1 | terminase small subunit | - |
| JNN58_RS00745 () | 144355..145656 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| JNN58_RS00750 () | 145659..147065 | + | 1407 | WP_001551056.1 | DUF4055 domain-containing protein | - |
| JNN58_RS00755 () | 147049..148161 | + | 1113 | WP_001363932.1 | hypothetical protein | - |
| JNN58_RS00760 () | 148266..149030 | + | 765 | WP_001551057.1 | hypothetical protein | - |
| JNN58_RS00765 () | 149129..150268 | + | 1140 | WP_000918487.1 | hypothetical protein | - |
| JNN58_RS00770 () | 150311..150487 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| JNN58_RS00775 () | 150491..150886 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| JNN58_RS00780 () | 150886..151269 | + | 384 | WP_001551058.1 | hypothetical protein | - |
| JNN58_RS00785 () | 151270..151650 | + | 381 | WP_001551059.1 | hypothetical protein | - |
| JNN58_RS00790 () | 151647..152039 | + | 393 | WP_000673077.1 | hypothetical protein | - |
| JNN58_RS00795 () | 152066..153028 | + | 963 | WP_001551060.1 | hypothetical protein | - |
| JNN58_RS00800 () | 153179..153538 | + | 360 | WP_122452218.1 | hypothetical protein | - |
| JNN58_RS00805 () | 153646..153846 | + | 201 | WP_032284309.1 | hypothetical protein | - |
| JNN58_RS00810 () | 154010..156508 | + | 2499 | WP_001551061.1 | phage tail length tape measure family protein | - |
| JNN58_RS00815 () | 156512..157243 | + | 732 | WP_077634177.1 | phage tail tape measure protein | - |
| JNN58_RS00820 () | 157236..157574 | + | 339 | WP_000024051.1 | phage tail protein | - |
| JNN58_RS00825 () | 157574..158272 | + | 699 | WP_001152425.1 | phage minor tail protein L | - |
| JNN58_RS00830 () | 158278..159021 | + | 744 | WP_032147653.1 | C40 family peptidase | - |
| JNN58_RS00835 () | 158958..159566 | + | 609 | WP_050436738.1 | tail assembly protein | - |
| JNN58_RS00840 () | 159627..163106 | + | 3480 | WP_075827251.1 | host specificity protein J | - |
| JNN58_RS00845 () | 163174..163773 | + | 600 | WP_001228337.1 | Outer membrane protein X | VF |
| JNN58_RS00850 () | 163838..166213 | + | 2376 | WP_065726093.1 | prophage tail fiber N-terminal domain-containing protein | - |
| JNN58_RS00855 () | 166213..166494 | + | 282 | WP_001518417.1 | hypothetical protein | - |
| JNN58_RS00860 () | 166504..167544 | + | 1041 | WP_001551067.1 | tail fiber domain-containing protein | - |
| JNN58_RS00865 () | 167587..167880 | + | 294 | WP_000355602.1 | hypothetical protein | - |
| JNN58_RS00870 () | 167900..168019 | + | 120 | Protein_171 | tail fiber assembly protein | - |
| JNN58_RS00875 () | 168232..169089 | - | 858 | WP_000968130.1 | iron/manganese ABC transporter permease subunit SitD | - |
| JNN58_RS00880 () | 169086..169943 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| JNN58_RS00885 () | 169940..170767 | - | 828 | WP_000983720.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| JNN58_RS00890 () | 170767..171681 | - | 915 | WP_000286867.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|