MGE detailed information
MGE type: Genomic_island MGE length: 29931 bp
Accession: NZ_CP068826 Location: 4727894..4757824 Organism: Escherichia coli strain RIVM_C030300 Replicon: chromosome
Accession: NZ_CP068826 Location: 4727894..4757824 Organism: Escherichia coli strain RIVM_C030300 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN53_RS22795 () | 4723261..4724205 | - | 945 | WP_001521641.1 | DNA-binding transcriptional regulator DsdC | - |
| JNN53_RS22800 () | 4724423..4725760 | + | 1338 | WP_001521642.1 | D-serine transporter DsdX | - |
| JNN53_RS22805 () | 4725778..4727109 | + | 1332 | WP_001521644.1 | D-serine ammonia-lyase | - |
| JNN53_RS22810 () | 4727285..4728483 | + | 1199 | Protein_4468 | IS3 family transposase | - |
| JNN53_RS22815 () | 4728633..4729646 | + | 1014 | WP_021541786.1 | aldose 1-epimerase family protein | - |
| JNN53_RS22820 () | 4729857..4730093 | - | 237 | WP_000958149.1 | AlpA family transcriptional regulator | - |
| JNN53_RS22825 () | 4730162..4730737 | - | 576 | WP_202852182.1 | hypothetical protein | - |
| JNN53_RS22830 () | 4730985..4731551 | - | 567 | WP_097496567.1 | inovirus-type Gp2 protein | - |
| JNN53_RS22835 () | 4733145..4734749 | - | 1605 | WP_001083417.1 | DUF3987 domain-containing protein | - |
| JNN53_RS22840 () | 4735076..4735807 | - | 732 | WP_001075491.1 | inovirus Gp2 family protein | - |
| JNN53_RS22845 () | 4736477..4737007 | + | 531 | WP_000778605.1 | hypothetical protein | - |
| JNN53_RS22850 () | 4738400..4739209 | + | 810 | WP_023155731.1 | hypothetical protein | - |
| JNN53_RS22855 () | 4739206..4740138 | - | 933 | WP_023155730.1 | hypothetical protein | - |
| JNN53_RS22860 () | 4740245..4741129 | + | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| JNN53_RS22865 () | 4741248..4741925 | + | 678 | WP_202859610.1 | hypothetical protein | - |
| JNN53_RS22870 () | 4741931..4742164 | + | 234 | WP_001278287.1 | DUF905 family protein | - |
| JNN53_RS22875 () | 4742254..4743072 | + | 819 | WP_001175148.1 | DUF945 domain-containing protein | - |
| JNN53_RS22880 () | 4743154..4743633 | + | 480 | WP_120136233.1 | antirestriction protein | - |
| JNN53_RS22885 () | 4743649..4744125 | + | 477 | WP_001366855.1 | RadC family protein | - |
| JNN53_RS22890 () | 4744188..4744409 | + | 222 | WP_000692309.1 | DUF987 domain-containing protein | - |
| JNN53_RS22895 () | 4744489..4744863 | + | 375 | WP_001285415.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JNN53_RS22900 () | 4744910..4745287 | + | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| JNN53_RS22905 () | 4745284..4745772 | + | 489 | WP_000761677.1 | hypothetical protein | - |
| JNN53_RS22910 () | 4745784..4745981 | + | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| JNN53_RS22915 () | 4746066..4746932 | + | 867 | WP_001280433.1 | DUF4942 domain-containing protein | - |
| JNN53_RS22920 () | 4747004..4747267 | + | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| JNN53_RS22925 () | 4747264..4747590 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JNN53_RS22930 () | 4748473..4750011 | + | 1539 | WP_001187178.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| JNN53_RS22935 () | 4750377..4751711 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| JNN53_RS22940 () | 4751791..4753938 | + | 2148 | WP_001550474.1 | lysine decarboxylase CadA | - |
| JNN53_RS22945 () | 4753997..4755454 | + | 1458 | WP_001550473.1 | dipeptide/tripeptide permease DtpC | - |
| JNN53_RS22950 () | 4755691..4757208 | + | 1518 | WP_001550472.1 | lysine--tRNA ligase | - |
| JNN53_RS22955 () | 4757327..4757500 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JNN53_RS22960 () | 4757528..4757824 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JNN53_RS22965 () | 4758053..4758325 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| JNN53_RS22970 () | 4758337..4758567 | - | 231 | WP_001550470.1 | (4Fe-4S)-binding protein | - |
| JNN53_RS22975 () | 4758747..4760378 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| JNN53_RS22980 () | 4760375..4761094 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|