MGE detailed information
MGE type: Prophage MGE length: 25284 bp
Accession: NZ_CP068825 Location: 2700158..2725441 Organism: Escherichia coli strain RIVM_C030256 Replicon: chromosome
Accession: NZ_CP068825 Location: 2700158..2725441 Organism: Escherichia coli strain RIVM_C030256 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN79_RS13040 () | 2696014..2696814 | + | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| JNN79_RS13045 () | 2696827..2697678 | + | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| JNN79_RS13050 () | 2697733..2698191 | + | 459 | WP_000156255.1 | DUF986 family protein | - |
| JNN79_RS13055 () | 2698620..2699186 | + | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| JNN79_RS13060 () | 2699183..2699992 | - | 810 | WP_000010122.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| JNN79_RS13065 () | 2700158..2700367 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| JNN79_RS13070 () | 2700380..2700523 | - | 144 | WP_001295496.1 | YobF family protein | - |
| JNN79_RS13075 () | 2701193..2701480 | - | 288 | WP_001006866.1 | YebO family protein | - |
| JNN79_RS13080 () | 2701555..2701698 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| JNN79_RS13085 () | 2701857..2702095 | + | 239 | Protein_2558 | hypothetical protein | - |
| JNN79_RS13090 () | 2702239..2703030 | - | 792 | WP_001262179.1 | DNA-binding transcriptional regulator KdgR | - |
| JNN79_RS13095 () | 2703207..2704580 | + | 1374 | WP_001309553.1 | MFS transporter | - |
| JNN79_RS13100 () | 2704626..2705507 | - | 882 | WP_000984517.1 | protease HtpX | - |
| JNN79_RS13105 () | 2705699..2707747 | - | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| JNN79_RS13110 () | 2707767..2708465 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| JNN79_RS13115 () | 2708562..2709059 | - | 498 | WP_001033105.1 | L-methionine (R)-S-oxide reductase | - |
| JNN79_RS13120 () | 2709189..2710472 | + | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| JNN79_RS13125 () | 2710441..2713074 | + | 2634 | WP_001306757.1 | hypothetical protein | VF |
| JNN79_RS13130 () | 2713154..2714593 | + | 1440 | WP_001309555.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| JNN79_RS13135 () | 2714711..2714947 | + | 237 | WP_001295499.1 | DUF1480 family protein | - |
| JNN79_RS13140 () | 2715052..2715243 | + | 192 | WP_001296140.1 | YebW family protein | - |
| JNN79_RS13145 () | 2715244..2715900 | - | 657 | WP_000812712.1 | protein-serine/threonine phosphatase | - |
| - () | 2715997..2716268 | + | 272 | - | - | Antitoxin Detail |
| - () | 2716035..2716138 | - | 104 | - | - | Toxin Detail |
| JNN79_RS13150 () | 2716296..2716637 | - | 342 | WP_000976481.1 | YebY family protein | - |
| JNN79_RS13155 () | 2716650..2717522 | - | 873 | WP_000879330.1 | copper homeostasis membrane protein CopD | - |
| JNN79_RS13160 () | 2717526..2717900 | - | 375 | WP_000204705.1 | CopC domain-containing protein YobA | - |
| JNN79_RS13165 () | 2718039..2718269 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| JNN79_RS13170 () | 2718371..2719027 | + | 657 | WP_000011651.1 | carbon-nitrogen hydrolase family protein | - |
| JNN79_RS13175 () | 2719051..2719713 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| JNN79_RS13180 () | 2719710..2721770 | - | 2061 | WP_000936971.1 | oligopeptidase B | - |
| JNN79_RS13185 () | 2721927..2722352 | - | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JNN79_RS13190 () | 2722409..2723578 | + | 1170 | WP_000942660.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JNN79_RS13195 () | 2723742..2724401 | - | 660 | WP_000024735.1 | tellurite resistance TerB family protein | - |
| JNN79_RS13200 () | 2724728..2725084 | - | 357 | WP_001295500.1 | protein YebF | - |
| JNN79_RS13205 () | 2725151..2725441 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| JNN79_RS13210 () | 2725575..2726753 | + | 1179 | WP_000173461.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| JNN79_RS13215 () | 2726808..2727449 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| JNN79_RS13220 () | 2727486..2729297 | - | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|