MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 73582 bp
Accession: NZ_CP068824 Location: 828262..901843 Organism: Escherichia coli strain RIVM_C030197 Replicon: chromosome
Accession: NZ_CP068824 Location: 828262..901843 Organism: Escherichia coli strain RIVM_C030197 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN63_RS03895 () | 824863..826011 | - | 1149 | WP_000905920.1 | capsule polysaccharide export inner-membrane protein KpsE | - |
| JNN63_RS03900 () | 826083..827066 | - | 984 | WP_001296394.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| JNN63_RS03905 () | 827876..828046 | - | 171 | Protein_766 | IS110 family transposase | - |
| JNN63_RS03910 () | 828389..829231 | - | 843 | Protein_767 | DUF4942 domain-containing protein | - |
| JNN63_RS03915 () | 829316..829510 | - | 195 | WP_024181941.1 | DUF957 domain-containing protein | - |
| JNN63_RS03920 () | 829589..829738 | - | 150 | Protein_769 | hypothetical protein | - |
| JNN63_RS03925 () | 829735..830112 | - | 378 | WP_001564063.1 | TA system toxin CbtA family protein | Toxin Detail |
| JNN63_RS03930 () | 830202..830570 | - | 369 | WP_021553056.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JNN63_RS03935 () | 830733..830954 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| JNN63_RS03940 () | 831019..831495 | - | 477 | WP_021553055.1 | RadC family protein | - |
| JNN63_RS03945 () | 831511..831990 | - | 480 | WP_001564060.1 | antirestriction protein | - |
| JNN63_RS03950 () | 832256..833074 | - | 819 | WP_001564059.1 | DUF945 domain-containing protein | - |
| JNN63_RS03955 () | 833164..833397 | - | 234 | WP_001278293.1 | DUF905 family protein | - |
| JNN63_RS03960 () | 833403..834080 | - | 678 | WP_202852189.1 | hypothetical protein | - |
| JNN63_RS03965 () | 834231..834911 | - | 681 | WP_001278649.1 | WYL domain-containing protein | - |
| JNN63_RS03970 () | 835114..835998 | - | 885 | WP_001564055.1 | 50S ribosome-binding GTPase | - |
| JNN63_RS03975 () | 836099..837322 | + | 1224 | WP_001107219.1 | hypothetical protein | - |
| JNN63_RS03980 () | 838485..839015 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| JNN63_RS03985 () | 839685..840416 | + | 732 | WP_001075495.1 | inovirus Gp2 family protein | - |
| JNN63_RS03990 () | 840937..841389 | + | 453 | WP_000558152.1 | N-acetyltransferase | - |
| JNN63_RS03995 () | 841925..842860 | + | 936 | WP_000332862.1 | pseudouridine kinase | - |
| JNN63_RS04000 () | 842853..843788 | + | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| JNN63_RS04005 () | 843872..845122 | + | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| JNN63_RS04010 () | 845141..846235 | - | 1095 | WP_000370278.1 | sugar kinase | - |
| JNN63_RS04015 () | 847536..848102 | + | 567 | WP_202852190.1 | inovirus-type Gp2 protein | - |
| JNN63_RS04020 () | 848360..848935 | + | 576 | WP_001564054.1 | hypothetical protein | - |
| JNN63_RS04025 () | 849004..849237 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| JNN63_RS04030 () | 849249..849474 | + | 226 | Protein_791 | hypothetical protein | - |
| JNN63_RS04035 () | 849536..849802 | - | 267 | Protein_792 | IS3 family transposase IS2 | Transposase |
| JNN63_RS04040 () | 849893..851050 | + | 1158 | Protein_793 | Multidrug resistance protein MexB | VF |
| JNN63_RS04045 () | 851171..851821 | + | 651 | WP_001564048.1 | TetR/AcrR family transcriptional regulator | - |
| JNN63_RS04050 () | 851844..852137 | + | 294 | Protein_795 | helix-turn-helix domain-containing protein | - |
| JNN63_RS04055 () | 852494..853039 | - | 546 | WP_001564047.1 | propanediol utilization system shell hexameric protein GrpS | - |
| JNN63_RS04060 () | 853084..854235 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| JNN63_RS04065 () | 854364..855419 | - | 1056 | WP_001564046.1 | HTH-type transcriptional activator Btr | VF |
| JNN63_RS04070 () | 855436..856665 | - | 1230 | WP_000792585.1 | propanediol utilization sensor histidine kinase GrpP | - |
| JNN63_RS04075 () | 857281..857874 | - | 594 | Protein_800 | maturase | - |
| JNN63_RS04080 () | 857874..858243 | - | 370 | Protein_801 | reverse transcriptase/maturase | - |
| JNN63_RS04085 () | 858855..859760 | - | 906 | WP_001564044.1 | propanediol utilization system permease GrpO | - |
| JNN63_RS04090 () | 859897..860814 | - | 918 | WP_001564043.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| JNN63_RS04095 () | 860923..863475 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| JNN63_RS04100 () | 863524..864099 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| JNN63_RS04105 () | 864110..864409 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| JNN63_RS04110 () | 864433..865950 | - | 1518 | WP_000997839.1 | Aldehyde-alcohol dehydrogenase | VF |
| JNN63_RS04115 () | 866011..866796 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| JNN63_RS04120 () | 866818..867099 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| JNN63_RS04125 () | 867384..868580 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| JNN63_RS04130 () | 868609..869106 | - | 498 | WP_001564042.1 | propanediol utilization system heme-binding protein GrpF | - |
| JNN63_RS04135 () | 869134..869403 | - | 270 | WP_001564041.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| JNN63_RS04140 () | 869415..870119 | - | 705 | WP_000370214.1 | propanediol utilization system flavoprotein GrpD | - |
| JNN63_RS04145 () | 870124..870882 | - | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| JNN63_RS04150 () | 870937..871623 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| JNN63_RS04155 () | 871763..872881 | - | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| JNN63_RS04160 () | 873238..873738 | + | 501 | Protein_817 | DNA-binding protein | - |
| JNN63_RS04165 () | 873834..874067 | + | 234 | WP_000124185.1 | hypothetical protein | - |
| JNN63_RS04170 () | 874120..874311 | - | 192 | WP_001287883.1 | DUF4222 domain-containing protein | - |
| JNN63_RS04175 () | 875032..875292 | + | 261 | Protein_820 | IS3 family transposase ISLad1 | Transposase |
| JNN63_RS04180 () | 875435..877180 | + | 1746 | WP_001564039.1 | AAA family ATPase | - |
| JNN63_RS04185 () | 877574..878014 | + | 441 | WP_001403216.1 | hypothetical protein | VF |
| JNN63_RS04190 () | 878055..878921 | + | 867 | Protein_823 | ImpA domain protein | - |
| JNN63_RS04195 () | 879038..879682 | + | 645 | WP_024196335.1 | hypothetical protein | - |
| JNN63_RS04200 () | 879823..881055 | + | 1233 | WP_001564037.1 | phosphoadenosine phosphosulfate reductase | - |
| JNN63_RS04205 () | 881040..881678 | + | 639 | WP_001564035.1 | ParB N-terminal domain-containing protein | - |
| JNN63_RS04210 () | 881757..882026 | + | 270 | WP_000226517.1 | PerC family transcriptional regulator | - |
| JNN63_RS04215 () | 882047..882691 | + | 645 | WP_106106617.1 | hypothetical protein | - |
| JNN63_RS04220 () | 882756..883079 | + | 324 | WP_001564033.1 | hypothetical protein | - |
| JNN63_RS04225 () | 883127..883918 | - | 792 | Protein_830 | ATP-dependent helicase | - |
| JNN63_RS04230 () | 883913..884302 | + | 390 | Protein_831 | IS3 family transposase | - |
| JNN63_RS04235 () | 884974..886482 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| JNN63_RS04240 () | 886572..887045 | + | 474 | Protein_833 | IS3 family transposase IS629 | Transposase |
| JNN63_RS04245 () | 887243..887500 | - | 258 | Protein_834 | IS3 family transposase IS911 | Transposase |
| JNN63_RS04250 () | 887570..887917 | - | 348 | WP_001564031.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| JNN63_RS04255 () | 888536..889229 | - | 694 | Protein_836 | IS1 family transposase IS1N | Transposase |
| JNN63_RS04260 () | 889482..890951 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| JNN63_RS04265 () | 891056..893425 | + | 2370 | WP_000671170.1 | arginine decarboxylase | - |
| JNN63_RS04270 () | 893500..894999 | + | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| JNN63_RS04275 () | 895142..895839 | + | 698 | Protein_840 | IS1 family transposase IS1S | Transposase |
| JNN63_RS04280 () | 896306..896857 | - | 552 | WP_001447126.1 | Transcriptional repressor MprA | VF |
| JNN63_RS04285 () | 897024..897815 | - | 792 | Protein_842 | IS3 family transposase | - |
| JNN63_RS04290 () | 897832..898529 | - | 698 | Protein_843 | IS1 family transposase IS1A | Transposase |
| JNN63_RS04295 () | 899059..900102 | - | 1044 | WP_000147018.1 | hypothetical protein | - |
| JNN63_RS04300 () | 900358..901623 | - | 1266 | WP_001218869.1 | Prophage integrase IntS ; Integrase | Integrase |
| JNN63_RS04310 () | 902002..902709 | - | 708 | WP_000234532.1 | DUF554 domain-containing protein | - |
| JNN63_RS04315 () | 903101..905236 | + | 2136 | WP_001564026.1 | ornithine decarboxylase | - |
| JNN63_RS04320 () | 905285..906541 | - | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|