MGE detailed information
MGE type: Genomic_island MGE length: 8550 bp
Accession: NZ_CP068824 Location: 4439100..4447649 Organism: Escherichia coli strain RIVM_C030197 Replicon: chromosome
Accession: NZ_CP068824 Location: 4439100..4447649 Organism: Escherichia coli strain RIVM_C030197 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN63_RS21315 () | 4435631..4436356 | - | 726 | WP_000066559.1 | type 1 fimbria chaperone FimC | - |
| JNN63_RS21320 () | 4436393..4436932 | - | 540 | WP_000824099.1 | type 1 fimbrial protein | - |
| JNN63_RS21325 () | 4436997..4437545 | - | 549 | WP_106106609.1 | type 1 fimbrial major subunit FimA | - |
| JNN63_RS21330 () | 4438026..4438622 | - | 597 | WP_000044708.1 | type 1 fimbria switch DNA invertase FimE | - |
| JNN63_RS21335 () | 4439100..4439702 | - | 603 | WP_001564306.1 | Tyrosine recombinase XerC | VF |
| JNN63_RS21340 () | 4441166..4441882 | + | 717 | WP_001519309.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| JNN63_RS21345 () | 4441902..4443008 | + | 1107 | WP_001519308.1 | N-acetylneuraminate epimerase | - |
| JNN63_RS21350 () | 4443073..4444053 | + | 981 | WP_001519307.1 | transposase | - |
| JNN63_RS21355 () | 4444636..4445877 | - | 1242 | Protein_4182 | helicase YjhR | - |
| JNN63_RS21360 () | 4445940..4446239 | + | 300 | WP_001519304.1 | GNAT family N-acetyltransferase | - |
| JNN63_RS21365 () | 4446616..4446873 | + | 258 | WP_001550554.1 | hypothetical protein | Toxin Detail |
| JNN63_RS21370 () | 4446885..4447436 | + | 552 | WP_001519303.1 | N-acetyltransferase | Antitoxin Detail |
| JNN63_RS21375 () | 4447488..4447649 | + | 162 | WP_001519302.1 | hypothetical protein | - |
| JNN63_RS21380 () | 4447686..4448234 | + | 549 | WP_001519301.1 | hypothetical protein | - |
| JNN63_RS21385 () | 4448361..4448621 | + | 261 | WP_000084876.1 | hypothetical protein | - |
| JNN63_RS21390 () | 4448659..4448775 | + | 117 | Protein_4189 | VOC family protein | - |
| JNN63_RS21395 () | 4449020..4450141 | + | 1122 | WP_000010833.1 | M42 family metallopeptidase | - |
| JNN63_RS21400 () | 4450138..4450416 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| JNN63_RS21405 () | 4450428..4451741 | + | 1314 | WP_001519300.1 | galactitol-specific PTS transporter subunit IIC | - |
| JNN63_RS21410 () | 4451754..4452560 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|