MGE detailed information
MGE type: Genomic_island MGE length: 16157 bp
Accession: NZ_CP068823 Location: 3807892..3824048 Organism: Escherichia coli strain RIVM_C029494 Replicon: chromosome
Accession: NZ_CP068823 Location: 3807892..3824048 Organism: Escherichia coli strain RIVM_C029494 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN66_RS18025 () | 3803154..3804611 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| JNN66_RS23350 () | 3804659..3804901 | + | 243 | WP_001029361.1 | hypothetical protein | - |
| JNN66_RS18030 () | 3804918..3805427 | - | 510 | WP_001361775.1 | hydrolase | - |
| JNN66_RS18035 () | 3805489..3806103 | - | 615 | WP_075862064.1 | peptide chain release factor H | - |
| JNN66_RS18040 () | 3806100..3807239 | - | 1140 | WP_170990260.1 | RNA ligase RtcB family protein | - |
| JNN66_RS18045 () | 3807430..3807882 | - | 453 | WP_075862062.1 | GNAT family N-acetyltransferase | - |
| JNN66_RS18050 () | 3807892..3808290 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| JNN66_RS18055 () | 3808293..3808586 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| JNN66_RS18060 () | 3808638..3809693 | - | 1056 | WP_075862061.1 | DNA polymerase IV | - |
| JNN66_RS18065 () | 3809764..3810549 | - | 786 | WP_179145761.1 | putative lateral flagellar export/assembly protein LafU | - |
| JNN66_RS18070 () | 3810521..3812233 | + | 1713 | Protein_3538 | flagellar biosynthesis protein FlhA | - |
| JNN66_RS18075 () | 3812345..3812842 | - | 498 | WP_000006244.1 | transposase | - |
| JNN66_RS18080 () | 3813018..3813791 | - | 774 | WP_015674584.1 | C40 family peptidase | - |
| JNN66_RS18085 () | 3813977..3814237 | + | 261 | WP_000729708.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| JNN66_RS18090 () | 3814240..3814517 | + | 278 | Protein_3542 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| JNN66_RS18095 () | 3814673..3815413 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| JNN66_RS18100 () | 3815384..3816151 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| JNN66_RS18105 () | 3816267..3816845 | - | 579 | WP_001570958.1 | D-sedoheptulose 7-phosphate isomerase | - |
| JNN66_RS18110 () | 3817085..3819529 | + | 2445 | WP_000973084.1 | acyl-CoA dehydrogenase FadE | - |
| JNN66_RS18115 () | 3819572..3820018 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| JNN66_RS18120 () | 3820199..3820969 | + | 771 | WP_001118056.1 | 2-oxoglutaramate amidase | - |
| JNN66_RS18130 () | 3821277..3822008 | - | 732 | WP_001366128.1 | DNA polymerase III subunit epsilon | - |
| JNN66_RS18135 () | 3822073..3822540 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| JNN66_RS18140 () | 3822537..3823259 | - | 723 | WP_001295200.1 | class I SAM-dependent methyltransferase | - |
| JNN66_RS18145 () | 3823293..3824048 | + | 756 | WP_001052730.1 | hydroxyacylglutathione hydrolase | - |
| JNN66_RS18150 () | 3824120..3825478 | + | 1359 | WP_000644686.1 | murein transglycosylase D | - |
| JNN66_RS18155 () | 3825527..3826297 | - | 771 | WP_000211711.1 | class I SAM-dependent methyltransferase | - |
| JNN66_RS18160 () | 3826374..3827174 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| JNN66_RS18165 () | 3827415..3828329 | + | 915 | WP_000648568.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|