MGE detailed information
MGE type: Genomic_island MGE length: 20355 bp
Accession: NZ_CP068822 Location: 3974646..3995000 Organism: Escherichia coli strain RIVM_C029324 Replicon: chromosome
Accession: NZ_CP068822 Location: 3974646..3995000 Organism: Escherichia coli strain RIVM_C029324 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN44_RS19010 () | 3970011..3970469 | - | 459 | WP_001291991.1 | xanthine phosphoribosyltransferase | - |
| JNN44_RS19015 () | 3970730..3972187 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| JNN44_RS19020 () | 3972244..3972858 | - | 615 | WP_000602124.1 | peptide chain release factor H | - |
| JNN44_RS19025 () | 3972855..3973994 | - | 1140 | WP_000521561.1 | RNA ligase RtcB family protein | - |
| JNN44_RS19030 () | 3974184..3974636 | - | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| JNN44_RS19035 () | 3974646..3975044 | - | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| JNN44_RS19040 () | 3975047..3975340 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| JNN44_RS19045 () | 3975392..3976447 | - | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| JNN44_RS19050 () | 3976518..3977303 | - | 786 | WP_000207578.1 | hypothetical protein | VF |
| JNN44_RS19055 () | 3977275..3978987 | + | 1713 | Protein_3738 | hypothetical protein | VF |
| JNN44_RS19060 () | 3979307..3979804 | - | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| JNN44_RS19065 () | 3979980..3980729 | - | 750 | WP_000093934.1 | hypothetical protein | VF |
| JNN44_RS19070 () | 3981041..3981781 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| JNN44_RS19075 () | 3981752..3982519 | - | 768 | WP_001298195.1 | class II glutamine amidotransferase | - |
| JNN44_RS19080 () | 3982724..3983302 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| JNN44_RS19085 () | 3983542..3985986 | + | 2445 | WP_000973131.1 | hypothetical protein | VF |
| JNN44_RS19090 () | 3986029..3986475 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| JNN44_RS19095 () | 3986656..3987426 | + | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| JNN44_RS19100 () | 3987477..3987671 | - | 195 | Protein_3747 | transposase | - |
| JNN44_RS19105 () | 3987697..3988185 | - | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| JNN44_RS19110 () | 3988279..3988782 | - | 504 | WP_000227712.1 | hypothetical protein | - |
| JNN44_RS19115 () | 3989011..3989775 | - | 765 | Protein_3750 | ISAs1 family transposase | - |
| JNN44_RS19120 () | 3990033..3990323 | - | 291 | WP_000513317.1 | hypothetical protein | - |
| JNN44_RS19125 () | 3990298..3991737 | - | 1440 | WP_000528851.1 | DUF4150 domain-containing protein | - |
| JNN44_RS19130 () | 3991730..3992776 | - | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| JNN44_RS19135 () | 3992883..3994865 | - | 1983 | Protein_3754 | hypothetical protein | VF |
| JNN44_RS19140 () | 3995086..3995604 | - | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| JNN44_RS19145 () | 3996310..3996813 | + | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| JNN44_RS19150 () | 3996836..3998320 | + | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| JNN44_RS19155 () | 3998325..3998750 | + | 426 | WP_001189667.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|