MGE detailed information
MGE type: Genomic_island MGE length: 76674 bp
Accession: NZ_CP068822 Location: 3821992..3898665 Organism: Escherichia coli strain RIVM_C029324 Replicon: chromosome
Accession: NZ_CP068822 Location: 3821992..3898665 Organism: Escherichia coli strain RIVM_C029324 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN44_RS18225 () | 3817149..3817736 | + | 588 | WP_001298544.1 | transcriptional regulator BetI | - |
| JNN44_RS18230 () | 3817750..3819222 | + | 1473 | WP_000089053.1 | betaine-aldehyde dehydrogenase | - |
| JNN44_RS18235 () | 3819236..3820906 | + | 1671 | WP_001159127.1 | choline dehydrogenase | - |
| JNN44_RS18240 () | 3821992..3822555 | + | 564 | WP_001335180.1 | Tyrosine recombinase XerD | VF |
| JNN44_RS18245 () | 3822885..3823679 | + | 795 | WP_001335181.1 | LuxR family transcriptional regulator HyxR | - |
| JNN44_RS18250 () | 3823833..3824594 | + | 762 | WP_001213042.1 | protein HyxA | - |
| JNN44_RS18255 () | 3824636..3825718 | + | 1083 | Protein_3580 | adhesin | - |
| JNN44_RS18260 () | 3825740..3826933 | + | 1194 | WP_071787751.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| JNN44_RS18265 () | 3827117..3827785 | + | 669 | WP_001005267.1 | membrane protein | - |
| JNN44_RS18270 () | 3828028..3828723 | - | 696 | WP_001298555.1 | lactate utilization protein C | - |
| JNN44_RS18275 () | 3828716..3830143 | - | 1428 | WP_000023923.1 | iron-sulfur cluster-binding protein | - |
| JNN44_RS18280 () | 3830154..3830873 | - | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| JNN44_RS18285 () | 3831400..3832254 | - | 855 | WP_000339603.1 | DNA-binding transcriptional regulator RclR | - |
| JNN44_RS18290 () | 3832481..3833806 | + | 1326 | WP_001046335.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| JNN44_RS18295 () | 3833915..3834151 | + | 237 | WP_000474088.1 | DUF1471 domain-containing protein | - |
| JNN44_RS18300 () | 3834163..3834756 | + | 594 | WP_001298546.1 | reactive chlorine species resistance protein RclC | - |
| JNN44_RS18305 () | 3834916..3835785 | - | 870 | WP_001295799.1 | aldo/keto reductase | - |
| JNN44_RS18310 () | 3836033..3836890 | + | 858 | WP_000620997.1 | HTH-type transcriptional activator RhaR | VF |
| JNN44_RS18315 () | 3837015..3841262 | - | 4248 | WP_000092548.1 | hypothetical protein | VF |
| JNN44_RS18320 () | 3841828..3842679 | + | 852 | WP_001174452.1 | aldo/keto reductase | - |
| JNN44_RS18325 () | 3842706..3843695 | + | 990 | WP_001172293.1 | aldo/keto reductase | - |
| JNN44_RS18330 () | 3843726..3844619 | - | 894 | WP_000910711.1 | HTH-type transcriptional regulator ArgP | VF |
| JNN44_RS18335 () | 3844819..3845745 | - | 927 | WP_001304867.1 | HTH-type transcriptional regulator ArgP | VF |
| JNN44_RS18340 () | 3845902..3846822 | + | 921 | WP_000860032.1 | alpha/beta hydrolase | - |
| JNN44_RS18345 () | 3846994..3848136 | + | 1143 | WP_000182341.1 | NADH-dependent flavin oxidoreductase | - |
| JNN44_RS18350 () | 3848609..3848710 | + | 102 | WP_000662258.1 | hypothetical protein | - |
| JNN44_RS18355 () | 3849075..3849338 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| JNN44_RS18360 () | 3849338..3849478 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| JNN44_RS18365 () | 3849548..3849738 | - | 191 | Protein_3602 | hypothetical protein | - |
| JNN44_RS18370 () | 3850562..3851104 | + | 543 | WP_000389022.1 | hypothetical protein | VF |
| JNN44_RS18375 () | 3851195..3851767 | + | 573 | WP_042856856.1 | hypothetical protein | VF |
| JNN44_RS18380 () | 3851824..3852492 | + | 669 | WP_000716404.1 | hypothetical protein | VF |
| JNN44_RS18385 () | 3852518..3855043 | + | 2526 | WP_001131116.1 | hypothetical protein | VF |
| JNN44_RS18390 () | 3855033..3856676 | + | 1644 | WP_001265646.1 | hypothetical protein | VF |
| JNN44_RS18395 () | 3856645..3857355 | + | 711 | WP_001295798.1 | hypothetical protein | VF |
| JNN44_RS18400 () | 3857662..3857991 | + | 330 | WP_001335188.1 | YkgJ family cysteine cluster protein | - |
| JNN44_RS18405 () | 3858003..3858166 | - | 164 | Protein_3610 | tail fiber assembly protein | - |
| JNN44_RS18410 () | 3858240..3858854 | - | 615 | WP_001019923.1 | YagU family protein | - |
| JNN44_RS18415 () | 3859069..3859254 | - | 186 | WP_000146243.1 | hypothetical protein | - |
| JNN44_RS18420 () | 3859303..3859461 | + | 159 | Protein_3613 | integrase | - |
| JNN44_RS18425 () | 3859678..3860371 | - | 694 | Protein_3614 | IS1 family transposase | - |
| JNN44_RS18430 () | 3860964..3865094 | + | 4131 | WP_001034003.1 | hypothetical protein | VF |
| JNN44_RS18435 () | 3865250..3865744 | + | 495 | WP_001059463.1 | Transcriptional regulator SlyA | VF |
| JNN44_RS18440 () | 3866179..3866517 | - | 339 | WP_000772639.1 | Arm DNA-binding domain-containing protein | - |
| JNN44_RS18445 () | 3866883..3868202 | + | 1320 | WP_000144686.1 | hypothetical protein ; Integrase | Integrase |
| JNN44_RS18450 () | 3868295..3869149 | - | 855 | WP_024174313.1 | DUF4942 domain-containing protein | - |
| JNN44_RS18455 () | 3869234..3869431 | - | 198 | WP_000839247.1 | DUF957 domain-containing protein | - |
| JNN44_RS18460 () | 3869443..3869931 | - | 489 | WP_000761726.1 | hypothetical protein | - |
| JNN44_RS18465 () | 3869928..3870305 | - | 378 | WP_000854700.1 | TA system toxin CbtA family protein | Toxin Detail |
| JNN44_RS18470 () | 3870395..3870763 | - | 369 | WP_001531802.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JNN44_RS18475 () | 3870926..3871147 | - | 222 | WP_000692353.1 | DUF987 domain-containing protein | - |
| JNN44_RS18480 () | 3871216..3871692 | - | 477 | WP_001186199.1 | RadC family protein | - |
| JNN44_RS18485 () | 3871708..3872193 | - | 486 | WP_000213723.1 | antirestriction protein | - |
| JNN44_RS18490 () | 3872285..3873103 | - | 819 | WP_001234709.1 | DUF945 domain-containing protein | - |
| JNN44_RS18495 () | 3873430..3876552 | - | 3123 | WP_202847140.1 | autotransporter adhesin Ag43 | - |
| JNN44_RS18500 () | 3876886..3877758 | - | 873 | WP_021538680.1 | GTPase family protein | - |
| JNN44_RS18505 () | 3878089..3878271 | + | 183 | WP_000282123.1 | hypothetical protein | - |
| JNN44_RS18510 () | 3878572..3878934 | - | 363 | WP_000229734.1 | IS66 family transposase ISEc23 | Transposase |
| JNN44_RS18515 () | 3879321..3880631 | + | 1311 | WP_000016482.1 | cadaverine/lysine antiporter | - |
| JNN44_RS18520 () | 3880662..3882788 | + | 2127 | WP_001092279.1 | lysine decarboxylase LdcC | - |
| JNN44_RS18525 () | 3882992..3883702 | + | 711 | WP_000215693.1 | helix-turn-helix domain-containing protein | - |
| JNN44_RS18530 () | 3883996..3885492 | + | 1497 | WP_001298165.1 | lysine--tRNA ligase | - |
| JNN44_RS18535 () | 3885539..3886426 | + | 888 | WP_001178453.1 | HTH-type transcriptional regulator ArgP | - |
| JNN44_RS18540 () | 3887213..3887575 | + | 363 | WP_000239761.1 | IS66 family transposase IS682 | Transposase |
| JNN44_RS18545 () | 3887572..3887919 | + | 348 | WP_000624593.1 | IS66 family transposase ISCro1 | Transposase |
| JNN44_RS18550 () | 3887939..3888538 | + | 600 | Protein_3639 | IS66 family transposase IS679 | Transposase |
| JNN44_RS18555 () | 3888607..3889389 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| JNN44_RS18560 () | 3889386..3889958 | - | 573 | Protein_3641 | IS21 family transposase IS100kyp | Transposase |
| JNN44_RS18565 () | 3889945..3890087 | - | 143 | Protein_3642 | IS110 family transposase | - |
| JNN44_RS18570 () | 3890148..3890333 | + | 186 | Protein_3643 | IS66 family transposase IS682 | Transposase |
| JNN44_RS18575 () | 3890440..3891639 | - | 1200 | WP_001298139.1 | GTP-binding protein | - |
| JNN44_RS18580 () | 3891903..3892694 | - | 792 | WP_000977398.1 | DUF4198 domain-containing protein | - |
| JNN44_RS18585 () | 3892713..3894683 | - | 1971 | WP_001445605.1 | Vitamin B12 transporter BtuB | VF |
| JNN44_RS18590 () | 3895029..3896392 | + | 1364 | Protein_3647 | IS4 family transposase ISEc13 | Transposase |
| JNN44_RS18600 () | 3898282..3898665 | + | 384 | Protein_3648 | IS4 family transposase IS4 | Transposase |
| JNN44_RS18605 () | 3898676..3898975 | - | 300 | WP_000805229.1 | hypothetical protein | - |
| JNN44_RS18610 () | 3899513..3900628 | + | 1116 | WP_001298145.1 | salmochelin biosynthesis C-glycosyltransferase IroB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|