MGE detailed information
MGE type: Genomic_island MGE length: 9624 bp
Accession: NZ_CP068821 Location: 4496204..4505827 Organism: Escherichia coli strain RIVM_C029952 Replicon: chromosome
Accession: NZ_CP068821 Location: 4496204..4505827 Organism: Escherichia coli strain RIVM_C029952 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN43_RS21790 () | 4493809..4494534 | - | 726 | WP_000066559.1 | type 1 fimbria chaperone FimC | - |
| JNN43_RS21795 () | 4494571..4495110 | - | 540 | WP_000824099.1 | type 1 fimbrial protein | - |
| JNN43_RS21800 () | 4495175..4495723 | - | 549 | WP_001357506.1 | type 1 fimbrial major subunit FimA | - |
| JNN43_RS21805 () | 4496204..4496800 | - | 597 | WP_000044708.1 | Tyrosine recombinase XerC | VF |
| JNN43_RS21810 () | 4497278..4497880 | - | 603 | WP_001564306.1 | Tyrosine recombinase XerC | VF |
| JNN43_RS21815 () | 4499344..4500060 | + | 717 | WP_001519309.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| JNN43_RS21820 () | 4500080..4501186 | + | 1107 | WP_001519308.1 | N-acetylneuraminate epimerase | - |
| JNN43_RS21825 () | 4501251..4502231 | + | 981 | WP_001519307.1 | transposase | - |
| JNN43_RS21830 () | 4502814..4504055 | - | 1242 | Protein_4271 | helicase YjhR | - |
| JNN43_RS21835 () | 4504118..4504417 | + | 300 | WP_001519304.1 | GNAT family N-acetyltransferase | - |
| JNN43_RS21840 () | 4504794..4505051 | + | 258 | WP_001550554.1 | hypothetical protein | Toxin Detail |
| JNN43_RS21845 () | 4505063..4505614 | + | 552 | WP_001519303.1 | N-acetyltransferase | Antitoxin Detail |
| JNN43_RS21850 () | 4505666..4505827 | + | 162 | WP_001519302.1 | hypothetical protein | - |
| JNN43_RS21855 () | 4505864..4506412 | + | 549 | WP_001519301.1 | hypothetical protein | - |
| JNN43_RS21860 () | 4506539..4506799 | + | 261 | WP_000084876.1 | hypothetical protein | - |
| JNN43_RS21865 () | 4506837..4506953 | + | 117 | Protein_4278 | VOC family protein | - |
| JNN43_RS21870 () | 4507198..4508319 | + | 1122 | WP_000010833.1 | M42 family metallopeptidase | - |
| JNN43_RS21875 () | 4508316..4508594 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| JNN43_RS21880 () | 4508606..4509919 | + | 1314 | WP_001519300.1 | galactitol-specific PTS transporter subunit IIC | - |
| JNN43_RS21885 () | 4509932..4510738 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|