MGE detailed information
MGE type: Genomic_island MGE length: 10759 bp
Accession: NZ_CP068821 Location: 4041580..4052338 Organism: Escherichia coli strain RIVM_C029952 Replicon: chromosome
Accession: NZ_CP068821 Location: 4041580..4052338 Organism: Escherichia coli strain RIVM_C029952 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN43_RS19505 () | 4036926..4037708 | - | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| JNN43_RS19510 () | 4038024..4041233 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| JNN43_RS19515 () | 4041394..4041534 | + | 141 | WP_001308408.1 | ash family protein | - |
| JNN43_RS19520 () | 4041580..4042050 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| JNN43_RS19525 () | 4042047..4042149 | + | 103 | Protein_3821 | helix-turn-helix domain-containing protein | - |
| JNN43_RS19530 () | 4042241..4042399 | + | 159 | Protein_3822 | integrase | - |
| JNN43_RS19540 () | 4042604..4043857 | - | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JNN43_RS19545 () | 4043869..4044972 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| JNN43_RS19550 () | 4045260..4046315 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| JNN43_RS19555 () | 4046354..4046755 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| JNN43_RS19560 () | 4046813..4048057 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 4047473..4047553 | - | 81 | NuclAT_11 | - | - |
| - () | 4047473..4047553 | - | 81 | NuclAT_11 | - | - |
| - () | 4047473..4047553 | - | 81 | NuclAT_11 | - | - |
| - () | 4047473..4047553 | - | 81 | NuclAT_11 | - | - |
| JNN43_RS19565 () | 4048149..4048607 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| JNN43_RS19570 () | 4048868..4050325 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| JNN43_RS19575 () | 4050382..4050734 | - | 353 | Protein_3830 | peptide chain release factor H | - |
| JNN43_RS19580 () | 4050730..4050936 | - | 207 | Protein_3831 | RtcB family protein | - |
| JNN43_RS19585 () | 4051182..4051634 | - | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| JNN43_RS19590 () | 4051644..4052042 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| JNN43_RS19595 () | 4052045..4052338 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| JNN43_RS19600 () | 4052390..4053445 | - | 1056 | WP_001550655.1 | DNA polymerase IV | - |
| JNN43_RS19605 () | 4053516..4054301 | - | 786 | WP_019842510.1 | putative lateral flagellar export/assembly protein LafU | - |
| JNN43_RS19610 () | 4054273..4055985 | + | 1713 | Protein_3837 | flagellar biosynthesis protein FlhA | - |
| JNN43_RS19615 () | 4056090..4056368 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| JNN43_RS19620 () | 4056361..4056717 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|