MGE detailed information
MGE type: Prophage MGE length: 8335 bp
Accession: NZ_CP068821 Location: 3337332..3345666 Organism: Escherichia coli strain RIVM_C029952 Replicon: chromosome
Accession: NZ_CP068821 Location: 3337332..3345666 Organism: Escherichia coli strain RIVM_C029952 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN43_RS16115 () | 3332529..3335162 | + | 2634 | WP_001306757.1 | lipid-binding membrane homeostasis protein YebT | - |
| JNN43_RS16120 () | 3335242..3336681 | + | 1440 | WP_024186439.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| JNN43_RS16125 () | 3336799..3337035 | + | 237 | WP_001295499.1 | DUF1480 family protein | - |
| JNN43_RS16130 () | 3337140..3337331 | + | 192 | WP_001296140.1 | YebW family protein | - |
| JNN43_RS16135 () | 3337332..3337988 | - | 657 | WP_001551231.1 | protein-serine/threonine phosphatase | - |
| - () | 3338085..3338356 | + | 272 | - | - | Antitoxin Detail |
| - () | 3338123..3338226 | - | 104 | - | - | Toxin Detail |
| JNN43_RS16140 () | 3338384..3338725 | - | 342 | WP_000976472.1 | YebY family protein | - |
| JNN43_RS16145 () | 3338738..3339610 | - | 873 | WP_001551232.1 | copper homeostasis membrane protein CopD | - |
| JNN43_RS16150 () | 3339614..3339988 | - | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| JNN43_RS16155 () | 3340127..3340357 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| JNN43_RS16160 () | 3340459..3341115 | + | 657 | WP_000011653.1 | carbon-nitrogen hydrolase family protein | - |
| JNN43_RS16165 () | 3341139..3341801 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| JNN43_RS16170 () | 3341798..3343858 | - | 2061 | WP_001551233.1 | oligopeptidase B | - |
| JNN43_RS16175 () | 3344015..3344440 | - | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JNN43_RS16180 () | 3344497..3345666 | + | 1170 | WP_001551234.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JNN43_RS16185 () | 3345830..3346489 | - | 660 | WP_000024733.1 | tellurite resistance TerB family protein | - |
| JNN43_RS16190 () | 3346816..3347172 | - | 357 | WP_001295500.1 | protein YebF | - |
| JNN43_RS16195 () | 3347239..3347529 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| JNN43_RS16200 () | 3347663..3348841 | + | 1179 | WP_001551236.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| JNN43_RS16205 () | 3348896..3349537 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|